Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1474-raw-cel-1593932833
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
417.2100.063.6At1g16950838266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
408.9100.0162.3At1g68320843161MYB62 (myb domain protein 62)putative transcription factor: R2R3-MYB transcription familyO.I.C.G.H.G.
340.6100.0165.0At1g71050843445heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFBMO.I.C.G.H.G.
237.0100.0198.9At2g39060818492nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
236.7100.0203.1At3g02885821194GASA5 (GAST1 PROTEIN HOMOLOG 5)F:unknown;P:response to gibberellin stimulus;C:endomembrane system;PO.I.C.G.H.G.
230.4100.0215.8At5g06720830561peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMVO.I.C.G.H.G.
220.7100.0141.0At5g58390835952peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
210.5100.0100.0At3g25810822173myrcene/ocimene synthase, putativeF:in 7 functions;P:monoterpene biosynthetic process;C:plastid;POO.I.C.G.H.G.
202.1100.047.8At1g25340839118MYB116 (myb domain protein 116)putative transcription factor (MYB116)O.I.C.G.H.G.
170.8100.067.6At1g64405842749unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
167.2100.032.5At2g28690817418unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
141.899.9146.4At5g65710836700HSL2 (HAESA-Like 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
133.399.978.1At5g26731832715unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
126.399.9150.6At2g17880816298DNAJ heat shock protein, putativeF:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAVO.I.C.G.H.G.
123.399.964.7At4g18170827542WRKY28member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
121.099.981.2At5g53320835413leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
119.599.9121.6At4g37250829879leucine-rich repeat family protein / protein kinase family proteinF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
109.399.985.1At1g69180843249CRC (CRABS CLAW)Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.O.I.C.G.H.G.
107.599.9122.4At3g14060820620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;PO.I.C.G.H.G.
100.999.984.3At3g48920824053AtMYB45 (myb domain protein 45)Member of the R2R3 factor gene family.O.I.C.G.H.G.
95.599.979.0At1g71830843513SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1)Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. laterO.I.C.G.H.G.
95.399.925.5At1g61130842406SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
89.099.9202.3At1g28130839706GH3.17encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.O.I.C.G.H.G.
88.699.936.3At2g27990817343BLH8 (BEL1-LIKE HOMEODOMAIN 8)Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.O.I.C.G.H.G.
86.799.989.1At5g24270832494SOS3 (SALT OVERLY SENSITIVE 3)encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.O.I.C.G.H.G.
86.199.9103.9At4g28490828967HAE (HAESA)member of Receptor kinase-like protein familyO.I.C.G.H.G.
84.099.919.1At5g38330833815LCR80 (Low-molecular-weight cysteine-rich 80)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
80.599.944.0At1g69440843276AGO7 (ARGONAUTE7)Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.O.I.C.G.H.G.
76.499.9152.1At3g28007822424nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
76.299.9237.6At2g02850814816ARPN (PLANTACYANIN)Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.O.I.C.G.H.G.
71.299.925.0At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorO.I.C.G.H.G.
65.699.817.1At1g75290843866oxidoreductase, acting on NADH or NADPHencodes a protein whose sequence is similar to an isoflavone reductaseO.I.C.G.H.G.
59.199.8151.1At1g78490844185CYP708A3member of CYP708AO.I.C.G.H.G.
51.799.839.0At2g28085817353auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.H.G.
50.299.827.4At1g68795843211CLE12 (CLAVATA3/ESR-RELATED 12)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
49.299.879.8At3g53960824563proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOFO.I.C.G.H.G.
48.099.8127.9At5g65870836716ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor.O.I.C.G.H.G.
47.499.818.8At1g66830843001leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
46.699.8117.9At5g44630834491terpene synthase/cyclase family proteinEncodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.O.I.C.G.H.G.
46.099.874.5At1g78970844237LUP1 (LUPEOL SYNTHASE 1)Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.O.I.C.G.H.G.
45.299.838.4At5g65140836638trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFAO.I.C.G.H.G.
45.299.831.1At4g36830829836GNS1/SUR4 membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;PFMOVO.I.C.G.H.G.
44.899.883.8At2g39220818507PLP6 (PATATIN-LIKE PROTEIN 6)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMFO.I.C.G.H.G.
43.699.855.3At2g30130817565ASL5Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.O.I.C.G.H.G.
43.499.846.6At3g23295--O.I.C.G.H.G.
42.299.882.9At5g52390835315photoassimilate-responsive protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
40.299.866.2At2g22420816773peroxidase 17 (PER17) (P17)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
39.399.8141.0At3g50530824217CRK (CDPK-related kinase)CDPK-related kinaseO.I.C.G.H.G.
37.499.770.4At3g14380820659integral membrane family proteinF:unknown;P:unknown;C:membrane;PO.I.C.G.H.G.
37.499.746.1At5g58980836015ceramidase family proteinF:ceramidase activity;P:biological_process unknown;C:endomembrane system;MBFOPO.I.C.G.H.G.
37.399.774.6At1g47960841214C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.O.I.C.G.H.G.
37.299.725.1At3g14395820661unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
36.299.7210.2At5g54510835539DFL1 (DWARF IN LIGHT 1)Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).O.I.C.G.H.G.
36.099.746.4At5g53890835470leucine-rich repeat transmembrane protein kinase, putativeEncodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.O.I.C.G.H.G.
35.199.742.6At1g26730839214EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.H.G.
34.799.733.8At5g40350834033MYB24 (myb domain protein 24)Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I.C.G.H.G.
33.699.737.5At1g49800841403unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
33.599.715.0At5g57080835812unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
32.299.762.6At5g48500834906unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
32.199.742.5At5g54400835528methyltransferaseF:methyltransferase activity;P:metabolic process;C:plasma membrane;BOAFPMO.I.C.G.H.G.
30.499.751.0At1g23010838909LPR1 (Low Phosphate Root1)Encodes a protein with multicopper oxidase activity.O.I.C.G.H.G.
30.299.735.3At4g10310826623HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.O.I.C.G.H.G.
30.099.723.0At5g12900831130unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOBFO.I.C.G.H.G.
29.699.778.4At3g23290821908--O.I.C.G.H.G.
28.799.7156.4At2g18230816338AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)Encodes a protein that might have inorganic pyrophosphatase activity.O.I.C.G.H.G.
28.399.712.1At2g42980818900aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBO.I.C.G.H.G.
28.299.7104.8At1g69040843236ACR4 (ACT REPEAT 4)ACT-domain containing protein involved in feedback regulation of amino acid metabolismO.I.C.G.H.G.
27.899.783.4At3g22420821810WNK2 (WITH NO K 2)Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.O.I.C.G.H.G.
27.599.7138.1At1g17490838322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
27.499.735.3At5g63580836477FLS2 (FLAVONOL SYNTHASE 2)encodes a protein whose sequence is similar to flavonol synthaseO.I.C.G.H.G.
27.399.762.7At2g43780818981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
27.299.7144.7At1g75390843875AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44)F:transcription factor activity, protein heterodimerization activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PFOMO.I.C.G.H.G.
27.299.751.1At3g22680821839unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
26.899.753.2At1g12400837795DNA bindingF:DNA binding;P:nucleotide-excision repair;C:endomembrane system;MPOO.I.C.G.H.G.
26.799.799.5At1g53885841826senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
26.599.728.1At3g11580820331DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PO.I.C.G.H.G.
26.499.716.4At1g08180837339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
26.399.758.7At1g78580844194ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE)Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.O.I.C.G.H.G.
26.399.711.9At3g04540819610-Encodes a defensin-like (DEFL) family protein.O.I.C.G.H.G.
25.799.731.7At4g16670827369phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOO.I.C.G.H.G.
25.199.629.3At4g30410829164transcription factorF:transcription factor activity;P:unknown;C:unknown;POO.I.C.G.H.G.
24.999.676.5At3g07410819929AtRABA5b (Arabidopsis Rab GTPase homolog A5b)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAO.I.C.G.H.G.
24.899.672.2At4g35020829654ARAC3 (ARABIDOPSIS RAC-LIKE 3)A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.O.I.C.G.H.G.
24.599.626.2At1g07390837251protein bindingF:protein binding;P:signal transduction;C:cellular_component unknown;PMOBFAVO.I.C.G.H.G.
24.499.6102.1At1g23730838983BCA3 (BETA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:cytosol, plasma membrane, membrane;BOPFMAO.I.C.G.H.G.
24.399.650.9At1g05710837078ethylene-responsive protein, putativeF:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;PO.I.C.G.H.G.
24.399.639.8At4g15680827245glutaredoxin family proteinF:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;MPFOBO.I.C.G.H.G.
23.999.6179.5At3g56490824816zinc-binding protein, putative / protein kinase C inhibitor, putativeF:protein kinase C binding, zinc ion binding, catalytic activity;P:biological_process unknown;C:plasma membrane;BOMAFPO.I.C.G.H.G.
23.999.659.0At1g24575839072unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
23.099.662.8At3g30180822709BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.O.I.C.G.H.G.
22.999.6158.7At1g52890841722ANAC019 (Arabidopsis NAC domain containing protein 19)encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.O.I.C.G.H.G.
22.899.673.8At1g62770842576invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
22.499.682.6At4g35480829700RHA3BEncodes a putative RING-H2 finger protein RHA3b.O.I.C.G.H.G.
22.199.6137.8At5g57785835887unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
21.999.620.0At1g53490841784DNA bindingF:DNA binding;P:biological_process unknown;C:cellular_component unknown;MOPBFAO.I.C.G.H.G.
21.499.633.3At5g03140831590lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
21.099.646.7At3g20100821553CYP705A19member of CYP705AO.I.C.G.H.G.
20.999.655.6At5g10770830944chloroplast nucleoid DNA-binding protein, putativeF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBO.I.C.G.H.G.
20.499.615.5At4g18350827562NCED2 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2)Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.O.I.C.G.H.G.
20.199.627.8At1g69600843296ZFHD1 (ZINC FINGER HOMEODOMAIN 1)Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.O.I.C.G.H.G.



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