Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1474-raw-cel-1593932801
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
795.5100.0147.6At5g23970832462transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO.I.C.G.H.G.
737.7100.084.5At1g16950838266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
598.1100.082.2At1g25340839118MYB116 (myb domain protein 116)putative transcription factor (MYB116)O.I.C.G.H.G.
529.4100.0192.9At2g30130817565ASL5Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.O.I.C.G.H.G.
510.2100.0181.4At1g68320843161MYB62 (myb domain protein 62)putative transcription factor: R2R3-MYB transcription familyO.I.C.G.H.G.
449.0100.072.7At4g18350827562NCED2 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2)Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.O.I.C.G.H.G.
448.0100.053.1At3g07970819988QRT2 (QUARTET 2)Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.O.I.C.G.H.G.
430.7100.052.1At2g28690817418unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
397.0100.0281.6At5g05340830416peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBMO.I.C.G.H.G.
330.1100.0231.7At5g52390835315photoassimilate-responsive protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
298.6100.047.1At1g66830843001leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
272.0100.0234.5At5g06720830561peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMVO.I.C.G.H.G.
268.8100.0183.6At4g28490828967HAE (HAESA)member of Receptor kinase-like protein familyO.I.C.G.H.G.
265.1100.090.8At3g44550823580FAR5 (FATTY ACID REDUCTASE 5)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBFOPAO.I.C.G.H.G.
264.0100.0214.5At3g02885821194GASA5 (GAST1 PROTEIN HOMOLOG 5)F:unknown;P:response to gibberellin stimulus;C:endomembrane system;PO.I.C.G.H.G.
223.1100.0133.6At1g71050843445heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFBMO.I.C.G.H.G.
188.8100.080.1At4g18170827542WRKY28member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
187.2100.0168.2At5g65710836700HSL2 (HAESA-Like 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
177.4100.068.6At2g47190819332MYB2 (MYB DOMAIN PROTEIN 2)Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.O.I.C.G.H.G.
177.0100.035.7At1g16490838219MYB58 (MYB DOMAIN PROTEIN 58)Member of the R2R3 factor gene family.O.I.C.G.H.G.
164.399.980.6At3g25640822151unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
160.499.9163.6At2g39060818492nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
151.499.970.3At5g65140836638trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFAO.I.C.G.H.G.
146.799.927.6At2g42980818900aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBO.I.C.G.H.G.
139.699.9112.2At5g58390835952peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
139.099.995.9At1g69180843249CRC (CRABS CLAW)Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.O.I.C.G.H.G.
138.799.995.2At1g71830843513SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1)Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. laterO.I.C.G.H.G.
133.899.968.9At5g16080831465AtCXE17 (Arabidopsis thaliana carboxyesterase 17)F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAVO.I.C.G.H.G.
124.999.944.1At3g55090824675ATPase, coupled to transmembrane movement of substancesF:ATPase activity, coupled to transmembrane movement of substances;P:response to cyclopentenone;C:membrane;BOMAFPVO.I.C.G.H.G.
124.299.969.4At2g41370818735BOP2 (BLADE ON PETIOLE2)Encodes a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abs cission.O.I.C.G.H.G.
122.899.948.8At2g40470818641LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)F:unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
116.999.967.0At1g69600843296ZFHD1 (ZINC FINGER HOMEODOMAIN 1)Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.O.I.C.G.H.G.
116.399.990.5At3g48920824053AtMYB45 (myb domain protein 45)Member of the R2R3 factor gene family.O.I.C.G.H.G.
110.199.978.6At5g54400835528methyltransferaseF:methyltransferase activity;P:metabolic process;C:plasma membrane;BOAFPMO.I.C.G.H.G.
96.399.972.4At5g53320835413leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
94.599.924.5At3g57950824964unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
92.599.982.1At1g77380844074AAP3Amino acid permease which transports basic amino acids.O.I.C.G.H.G.
82.799.993.0At4g30610829184BRS1 (BRI1 SUPPRESSOR 1)Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.O.I.C.G.H.G.
80.999.9151.5At1g35910840493trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFAO.I.C.G.H.G.
80.399.938.0At5g50010835065transcription factor/ transcription regulatorF:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
80.299.948.5At2g28085817353auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.H.G.
78.999.997.9At5g48500834906unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
78.799.9105.0At1g30040839883ATGA2OX2 (GIBBERELLIN 2-OXIDASE)Encodes a gibberellin 2-oxidase. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.O.I.C.G.H.G.
77.299.951.5At4g30410829164transcription factorF:transcription factor activity;P:unknown;C:unknown;POO.I.C.G.H.G.
73.899.953.7At4g16670827369phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOO.I.C.G.H.G.
70.499.945.8At3g11580820331DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PO.I.C.G.H.G.
70.399.956.7At5g26731832715unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
68.899.9182.4At3g54820824647PIP2F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVO.I.C.G.H.G.
68.599.928.4At5g23400832405disease resistance family protein / LRR family proteinF:protein binding;P:signal transduction, defense response;C:cell wall;PMOBFAVO.I.C.G.H.G.
67.299.8102.6At2g39220818507PLP6 (PATATIN-LIKE PROTEIN 6)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMFO.I.C.G.H.G.
67.099.842.4At1g64405842749unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
66.799.857.8At3g23295--O.I.C.G.H.G.
60.299.8118.3At2g03200814849aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMOO.I.C.G.H.G.
58.699.8102.6At2g17880816298DNAJ heat shock protein, putativeF:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAVO.I.C.G.H.G.
57.899.8132.4At3g28007822424nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
56.899.851.1At1g16500838220unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFVO.I.C.G.H.G.
56.399.8108.2At3g23290821908--O.I.C.G.H.G.
56.199.8130.9At4g35480829700RHA3BEncodes a putative RING-H2 finger protein RHA3b.O.I.C.G.H.G.
50.999.827.5At2g27990817343BLH8 (BEL1-LIKE HOMEODOMAIN 8)Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.O.I.C.G.H.G.
50.799.8156.3At1g44970841062peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
49.599.867.3At5g24270832494SOS3 (SALT OVERLY SENSITIVE 3)encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.O.I.C.G.H.G.
48.999.8150.0At1g28130839706GH3.17encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.O.I.C.G.H.G.
48.699.847.0At5g63580836477FLS2 (FLAVONOL SYNTHASE 2)encodes a protein whose sequence is similar to flavonol synthaseO.I.C.G.H.G.
47.299.8124.6At3g27400822361pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
47.199.816.8At3g59850825155polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAVO.I.C.G.H.G.
46.499.882.7At5g10770830944chloroplast nucleoid DNA-binding protein, putativeF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBO.I.C.G.H.G.
46.299.817.7At1g61130842406SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
46.199.850.7At5g02420831836unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
45.799.877.2At3g44540823579FAR4 (FATTY ACID REDUCTASE 4)F:oxidoreductase activity, acting on the CH-CH group of donors, binding, catalytic activity;P:microsporogenesis, metabolic process;C:cellular_component unknown;MBPOFO.I.C.G.H.G.
43.799.8112.3At1g03820839400unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMBO.I.C.G.H.G.
42.499.868.0At2g22420816773peroxidase 17 (PER17) (P17)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
42.399.8102.3At2g38110818389GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)Encodes a protein with glycerol-3-phosphate acyltransferase activity.O.I.C.G.H.G.
42.099.844.6At3g25810822173myrcene/ocimene synthase, putativeF:in 7 functions;P:monoterpene biosynthetic process;C:plastid;POO.I.C.G.H.G.
41.399.874.0At3g14380820659integral membrane family proteinF:unknown;P:unknown;C:membrane;PO.I.C.G.H.G.
39.599.8219.5At5g54510835539DFL1 (DWARF IN LIGHT 1)Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).O.I.C.G.H.G.
38.999.840.3At3g24450822035copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POMO.I.C.G.H.G.
38.099.823.9At1g68795843211CLE12 (CLAVATA3/ESR-RELATED 12)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
37.799.742.4At4g05100825855AtMYB74 (myb domain protein 74)Member of the R2R3 factor gene family.O.I.C.G.H.G.
36.699.752.8At5g54300835518unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBAO.I.C.G.H.G.
36.699.725.4At5g12900831130unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOBFO.I.C.G.H.G.
35.699.739.4At4g36110829768auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
35.599.746.1At5g53890835470leucine-rich repeat transmembrane protein kinase, putativeEncodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.O.I.C.G.H.G.
34.999.761.0At1g05710837078ethylene-responsive protein, putativeF:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;PO.I.C.G.H.G.
34.599.754.3At1g23010838909LPR1 (Low Phosphate Root1)Encodes a protein with multicopper oxidase activity.O.I.C.G.H.G.
34.399.775.7At2g36190818191AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAO.I.C.G.H.G.
33.599.7168.8At2g18230816338AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)Encodes a protein that might have inorganic pyrophosphatase activity.O.I.C.G.H.G.
32.799.741.8At4g21480828233carbohydrate transmembrane transporter/ sugar:hydrogen symporterF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAVO.I.C.G.H.G.
32.799.79.5At5g46115834653unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
32.499.78.2At5g59990836121-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMO.I.C.G.H.G.
32.199.757.8At3g20100821553CYP705A19member of CYP705AO.I.C.G.H.G.
32.199.726.3At4g36830829836GNS1/SUR4 membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;PFMOVO.I.C.G.H.G.
31.799.740.5At1g26730839214EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.H.G.
31.499.716.3At5g08480830747VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
30.999.765.6At3g14060820620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;PO.I.C.G.H.G.
30.699.742.6At5g48640834921cyclin family proteinF:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;MFPOO.I.C.G.H.G.
29.799.725.8At3g23240821902ERF1 (ETHYLENE RESPONSE FACTOR 1)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.O.I.C.G.H.G.
29.599.784.0At1g62770842576invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
29.499.716.1At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorO.I.C.G.H.G.
28.899.797.3At2g02000814731GAD3 (glutamate decarboxylase 3)F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAVO.I.C.G.H.G.
28.599.7107.9At3g63200825495PLP9 (PATATIN-LIKE PROTEIN 9)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BPMOFO.I.C.G.H.G.



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