Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1474-raw-cel-1593932641
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
490.3100.0139.2At3g25640822151unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
344.7100.0239.8At2g39060818492nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
303.9100.0140.0At1g68320843161MYB62 (myb domain protein 62)putative transcription factor: R2R3-MYB transcription familyO.I.C.G.H.G.
284.5100.0150.8At1g71050843445heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFBMO.I.C.G.H.G.
233.7100.0124.4At1g69180843249CRC (CRABS CLAW)Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.O.I.C.G.H.G.
216.6100.0110.2At5g54400835528methyltransferaseF:methyltransferase activity;P:metabolic process;C:plasma membrane;BOAFPMO.I.C.G.H.G.
209.8100.0252.1At3g28007822424nodulin MtN3 family proteinF:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
181.8100.0180.7At2g17880816298DNAJ heat shock protein, putativeF:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAVO.I.C.G.H.G.
181.3100.092.8At3g25810822173myrcene/ocimene synthase, putativeF:in 7 functions;P:monoterpene biosynthetic process;C:plastid;POO.I.C.G.H.G.
164.7100.0141.4At5g48500834906unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
151.299.9151.2At5g65710836700HSL2 (HAESA-Like 2)F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
134.399.9149.8At2g36190818191AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMAO.I.C.G.H.G.
104.199.958.5At5g40350834033MYB24 (myb domain protein 24)Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I.C.G.H.G.
97.099.991.1At1g23010838909LPR1 (Low Phosphate Root1)Encodes a protein with multicopper oxidase activity.O.I.C.G.H.G.
96.699.930.6At1g16950838266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
92.999.992.3At5g24270832494SOS3 (SALT OVERLY SENSITIVE 3)encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.O.I.C.G.H.G.
92.299.970.4At5g49130834972MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.H.G.
90.099.940.3At5g50010835065transcription factor/ transcription regulatorF:transcription factor activity, transcription regulator activity;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
88.099.936.3At1g68795843211CLE12 (CLAVATA3/ESR-RELATED 12)Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.O.I.C.G.H.G.
86.499.948.1At1g64405842749unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
82.899.9129.4At5g06720830561peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMVO.I.C.G.H.G.
79.099.9117.3At3g02885821194GASA5 (GAST1 PROTEIN HOMOLOG 5)F:unknown;P:response to gibberellin stimulus;C:endomembrane system;PO.I.C.G.H.G.
76.099.949.8At5g65140836638trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFAO.I.C.G.H.G.
69.199.920.9At2g28690817418unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
68.299.9100.9At1g47960841214C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.O.I.C.G.H.G.
68.199.978.4At5g58390835952peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
66.799.866.0At1g71830843513SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1)Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. laterO.I.C.G.H.G.
64.099.894.4At3g14060820620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;PO.I.C.G.H.G.
63.699.851.2At4g10310826623HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.O.I.C.G.H.G.
63.499.896.7At5g10770830944chloroplast nucleoid DNA-binding protein, putativeF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOBO.I.C.G.H.G.
61.599.887.8At4g28490828967HAE (HAESA)member of Receptor kinase-like protein familyO.I.C.G.H.G.
59.799.852.1At5g63580836477FLS2 (FLAVONOL SYNTHASE 2)encodes a protein whose sequence is similar to flavonol synthaseO.I.C.G.H.G.
59.399.852.1At5g26731832715unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
58.599.845.0At1g70210843357CYCD1Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.O.I.C.G.H.G.
58.399.8150.1At1g78490844185CYP708A3member of CYP708AO.I.C.G.H.G.
57.799.825.5At1g25340839118MYB116 (myb domain protein 116)putative transcription factor (MYB116)O.I.C.G.H.G.
56.899.829.0At2g27990817343BLH8 (BEL1-LIKE HOMEODOMAIN 8)Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.O.I.C.G.H.G.
56.299.860.6At4g15680827245glutaredoxin family proteinF:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;MPFOBO.I.C.G.H.G.
55.099.8114.7At1g62770842576invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
53.299.884.0At3g14380820659integral membrane family proteinF:unknown;P:unknown;C:membrane;PO.I.C.G.H.G.
51.599.850.8At3g23295--O.I.C.G.H.G.
49.599.810.1At5g59990836121-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMO.I.C.G.H.G.
48.599.824.0At5g66350836767SHI (SHORT INTERNODES)A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.O.I.C.G.H.G.
47.199.820.8At4g35070829659-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPVBFAO.I.C.G.H.G.
46.199.8198.1At2g18230816338AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)Encodes a protein that might have inorganic pyrophosphatase activity.O.I.C.G.H.G.
44.599.832.7At1g69440843276AGO7 (ARGONAUTE7)Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.O.I.C.G.H.G.
40.599.8222.4At5g54510835539DFL1 (DWARF IN LIGHT 1)Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).O.I.C.G.H.G.
40.499.891.6At3g23290821908--O.I.C.G.H.G.
40.099.839.4At2g41370818735BOP2 (BLADE ON PETIOLE2)Encodes a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abs cission.O.I.C.G.H.G.
39.499.8109.6At4g35480829700RHA3BEncodes a putative RING-H2 finger protein RHA3b.O.I.C.G.H.G.
39.299.846.2At5g53320835413leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAO.I.C.G.H.G.
38.099.8171.0At1g75390843875AtbZIP44 (Arabidopsis thaliana basic leucine-zipper 44)F:transcription factor activity, protein heterodimerization activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PFOMO.I.C.G.H.G.
36.899.756.8At1g78090844144ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE)homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatasesO.I.C.G.H.G.
36.499.767.1At4g37250829879leucine-rich repeat family protein / protein kinase family proteinF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
36.299.7124.3At1g23730838983BCA3 (BETA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:cytosol, plasma membrane, membrane;BOPFMAO.I.C.G.H.G.
34.799.736.5At1g69600843296ZFHD1 (ZINC FINGER HOMEODOMAIN 1)Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.O.I.C.G.H.G.
34.299.734.1At4g18170827542WRKY28member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
33.899.7107.3At5g65870836716ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor.O.I.C.G.H.G.
33.699.771.2At5g58960836013GIL1 (GRAVITROPIC IN THE LIGHT)Mutant plants display impaired light-regulation of the hypocotyl randomization response.O.I.C.G.H.G.
33.499.741.6At1g26730839214EXS family protein / ERD1/XPR1/SYG1 family proteinF:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOBO.I.C.G.H.G.
33.499.726.8At4g36830829836GNS1/SUR4 membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;PFMOVO.I.C.G.H.G.
32.999.799.0At5g44630834491terpene synthase/cyclase family proteinEncodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.O.I.C.G.H.G.
32.899.714.9At1g61130842406SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
32.299.735.5At4g16670827369phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;PFOO.I.C.G.H.G.
30.299.7149.5At2g02850814816ARPN (PLANTACYANIN)Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.O.I.C.G.H.G.
30.199.714.2At5g57080835812unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
29.799.713.5At5g20420832164CHR42 (chromatin remodeling 42)F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPAVO.I.C.G.H.G.
29.699.7107.3At1g69040843236ACR4 (ACT REPEAT 4)ACT-domain containing protein involved in feedback regulation of amino acid metabolismO.I.C.G.H.G.
29.499.7116.2At3g02310821151SEP2 (SEPALLATA 2)MADS-box protein, binds K domain of AG in vivoO.I.C.G.H.G.
29.399.716.0At2g45650819173AGL6 (AGAMOUS-LIKE 6)sequence suggests this encodes a MADS-box transcription factorO.I.C.G.H.G.
28.199.728.7At2g28085817353auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.H.G.
27.599.759.7At3g53960824563proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOFO.I.C.G.H.G.
27.199.76.9At1g14687838033AtHB32 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 32)F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO.I.C.G.H.G.
26.499.728.9At4g22160828305unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
25.899.797.7At1g53885841826senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.499.620.7At3g14395820661unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
25.099.672.4At4g35020829654ARAC3 (ARABIDOPSIS RAC-LIKE 3)A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.O.I.C.G.H.G.
24.899.615.9At1g08180837339unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
24.799.6100.5At3g63200825495PLP9 (PATATIN-LIKE PROTEIN 9)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BPMOFO.I.C.G.H.G.
24.199.613.9At5g12270831102oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.C.G.H.G.
23.999.648.5At4g27380828846unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
23.799.642.4At2g39710818555aspartyl protease family proteinEncodes a Cysteine-rich peptide (CRP) family proteinO.I.C.G.H.G.
23.499.685.3At5g16450831506dimethylmenaquinone methyltransferase family proteinF:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFMO.I.C.G.H.G.
22.999.628.5At5g16080831465AtCXE17 (Arabidopsis thaliana carboxyesterase 17)F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAVO.I.C.G.H.G.
22.699.622.0At2g19780816497leucine-rich repeat family protein / extensin family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
22.599.6174.1At3g56490824816zinc-binding protein, putative / protein kinase C inhibitor, putativeF:protein kinase C binding, zinc ion binding, catalytic activity;P:biological_process unknown;C:plasma membrane;BOMAFPO.I.C.G.H.G.
22.599.6104.3At3g54820824647PIP2F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVO.I.C.G.H.G.
21.999.648.9At2g22420816773peroxidase 17 (PER17) (P17)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
21.299.65.7At2g30370817587allergen-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
21.099.615.7At5g23400832405disease resistance family protein / LRR family proteinF:protein binding;P:signal transduction, defense response;C:cell wall;PMOBFAVO.I.C.G.H.G.
20.999.624.9At3g11580820331DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PO.I.C.G.H.G.
20.899.659.7At3g30180822709BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.O.I.C.G.H.G.
20.199.659.1At5g38890833880exoribonuclease-relatedF:RNA binding;P:biological_process unknown;C:cellular_component unknown;FMAOPO.I.C.G.H.G.
20.199.626.2At4g30410829164transcription factorF:transcription factor activity;P:unknown;C:unknown;POO.I.C.G.H.G.
19.999.6120.9At1g21460838744nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOO.I.C.G.H.G.
19.899.6229.9At3g2850082248060S acidic ribosomal protein P2 (RPP2C)F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, plasma membrane;MFOPABO.I.C.G.H.G.
19.499.652.8At2g43780818981unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
19.299.615.4At1g49830841406ethylene-responsive protein -relatedF:transcription regulator activity;P:regulation of transcription;C:nucleus;PO.I.C.G.H.G.
19.099.570.3At3g24770822075CLE41 (CLAVATA3/ESR-RELATED 41)Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195).O.I.C.G.H.G.
18.899.593.1At1g28130839706GH3.17encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage