Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1468-raw-cel-1591138721
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
140.599.994.9At5g53660835447AtGRF7 (GROWTH-REGULATING FACTOR 7)Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.O.I.C.G.H.G.
120.999.9202.8At5g44440834471FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMO.I.C.G.H.G.
116.399.937.2At1g70270843363ATP binding / DNA bindingF:DNA binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
106.099.9230.0At1g67910843119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
100.599.9227.5At5g04120830290phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAO.I.C.G.H.G.
66.099.8504.0At4g14130827051XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)xyloglucan endotransglycosylase-related protein (XTR7)O.I.C.G.H.G.
56.199.855.4At2g34020817963calcium ion bindingF:calcium ion binding;P:biological_process unknown;C:unknown;POMBFO.I.C.G.H.G.
54.199.8112.5At1g49570841381peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
52.499.8156.0At5g54190835507PORAlight-dependent NADPH:protochlorophyllide oxidoreductase AO.I.C.G.H.G.
45.399.851.4At5g01075831885beta-galactosidaseF:beta-galactosidase activity;P:carbohydrate metabolic process;C:endomembrane system, beta-galactosidase complex;PO.I.C.G.H.G.
44.499.854.2At5g57760835884unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
44.199.851.0At4g11610826766C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
42.599.874.8At5g63650836485SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.O.I.C.G.H.G.
41.299.8145.3At4g22610828357protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
41.099.813.5At1g77200844056AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.H.G.
36.699.726.9At4g37580829913HLS1 (HOOKLESS 1)involved in apical hook development. putative N-acetyltransferaseO.I.C.G.H.G.
35.399.7309.9At4g32460829381-F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBO.I.C.G.H.G.
32.699.7137.5At3g03640821201BGLU25 (BETA GLUCOSIDASE 25)Encodes beta-glucosidase (GLUC).O.I.C.G.H.G.
32.299.798.8At1g65310842839XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17)putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.O.I.C.G.H.G.
31.699.7113.4At4g16515827350unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
31.399.7137.3At5g12940831134leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
30.599.7147.5At5g22500832311FAR1 (FATTY ACID REDUCTASE 1)F:oxidoreductase activity, acting on the CH-CH group of donors, fatty acyl-CoA reductase (alcohol-forming) activity;P:microsporogenesis, metabolic process;C:chloroplast;MBFOPO.I.C.G.H.G.
27.499.718.8At3g12820820464AtMYB10 (myb domain protein 10)Member of the R2R3 factor gene family.O.I.C.G.H.G.
26.099.716.6At3g51410824304unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBFOO.I.C.G.H.G.
25.199.674.5At1g64640842772plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
24.599.6142.1At2g47780819390rubber elongation factor (REF) protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
22.899.6246.6At5g65390836664AGP7F:unknown;P:unknown;C:anchored to membrane;BMOPFVAO.I.C.G.H.G.
21.999.6124.6At1g70710843408ATGH9B1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B1)endo-1,4-beta-glucanase. Involved in cell elongation.O.I.C.G.H.G.
21.999.640.7At3g59900825160ARGOS (AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE)Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.O.I.C.G.H.G.
21.199.698.3At1g11545837698xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBOO.I.C.G.H.G.
21.199.630.1At2g37330818310ALS3 (ALUMINUM SENSITIVE 3)Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.O.I.C.G.H.G.
20.999.666.8At3g60530825224zinc finger (GATA type) family proteinF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOMO.I.C.G.H.G.
20.599.683.1At3g29575822619AFP3 (ABI FIVE BINDING PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMO.I.C.G.H.G.
20.099.627.7At4g01410828166harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
19.499.632.1At4g35720829724unknown proteinF:unknown;P:unknown;C:unknown;POO.I.C.G.H.G.
19.199.6284.6At4g21850828273methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAVO.I.C.G.H.G.
18.899.517.6At1g203903766766transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
18.699.5224.6At1g28330839729DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)dormancy-associated protein (DRM1)O.I.C.G.H.G.
18.599.577.6At4g23700828470ATCHX17 (CATION/H+ EXCHANGER 17)member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
18.499.5149.9At1g09570837483PHYA (PHYTOCHROME A)Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.O.I.C.G.H.G.
18.499.544.5At3g23880821971F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;POO.I.C.G.H.G.
18.399.5121.6At2g44080819014ARL (ARGOS-LIKE)Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1.O.I.C.G.H.G.
17.699.5104.8At5g02020831782unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
17.499.524.8At1g72070843538DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMPFAVO.I.C.G.H.G.
17.299.5220.6At2g01450814673ATMPK17member of MAP KinaseO.I.C.G.H.G.
16.599.582.3At5g50760835148auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
16.199.559.5At2g16630816164proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
15.799.5128.0At4g38580830015ATFP6 (FARNESYLATED PROTEIN 6)putative farnesylated protein (At4g38580) mRNA, completeO.I.C.G.H.G.
15.599.5128.6At3g28740822506CYP81D1Encodes a member of the cytochrome p450 family. Expression is upregulated in response to cis-jasmonate treatment. Overexpression induces synthesis of volatile compounds that affect chemical ecology and insect interactions.O.I.C.G.H.G.
15.199.413.2At3g29370822596unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.999.4197.6At5g10430830907AGP4 (ARABINOGALACTAN PROTEIN 4)Encodes arabinogalactan-protein (AGP4).O.I.C.G.H.G.
14.999.441.1At5g02550831052unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.899.4301.7At4g12510826863protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.C.G.H.G.
14.899.4206.8At4g28240828939wound-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
14.799.4760.1At2g38530818435LTP2 (LIPID TRANSFER PROTEIN 2)Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
14.599.4178.8At2g21140816649ATPRP2 (PROLINE-RICH PROTEIN 2)Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.O.I.C.G.H.G.
14.399.497.0At1g64660842774ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.O.I.C.G.H.G.
14.299.4115.8At5g24570832528unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
14.099.4135.6At3g13720820581PRA8F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;POMFO.I.C.G.H.G.
14.099.474.6At1g67810843107SUFE2 (SULFUR E 2)Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis.O.I.C.G.H.G.
14.099.443.4At1g29120839787unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;FPMOO.I.C.G.H.G.
13.899.4105.8At5g06370830525NC domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBMOO.I.C.G.H.G.
13.899.442.4At2g39705818554RTFL8 (ROTUNDIFOLIA LIKE 8)F:molecular_function unknown;P:shoot development;C:chloroplast;PO.I.C.G.H.G.
13.899.420.2At5g66330836765leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAO.I.C.G.H.G.
13.599.479.2At5g15290831381integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
13.499.4134.8At1g73120843643unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:unknown;PO.I.C.G.H.G.
13.499.452.5At3g43270823402pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:plant-type cell wall;PBFMO.I.C.G.H.G.
13.499.448.5At5g53980835481ATHB52 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 52)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.C.G.H.G.
13.399.48.4At4g10240826615zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POMO.I.C.G.H.G.
13.199.476.6At4g11190826721disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
12.899.3115.5At4g02290828080AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
12.899.349.8At1g55190841962PRA7F:unknown;P:vesicle-mediated transport;C:endoplasmic reticulum, plasma membrane;PMFOO.I.C.G.H.G.
12.899.323.1At2g15830816079unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
12.899.37.5At2g22200816754AP2 domain-containing transcription factorencodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.O.I.C.G.H.G.
12.799.3320.8At1g03870839384FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)fasciclin-like arabinogalactan-protein 9 (Fla9)O.I.C.G.H.G.
12.699.331.5At5g28300832914trihelix DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBVAO.I.C.G.H.G.
12.699.318.8At4g02700828201SULTR3F:sulfate transmembrane transporter activity;P:sulfate transport, transport;C:integral to membrane, membrane;BOMPFAO.I.C.G.H.G.
12.599.336.5At5g04770830355CAT6 (CATIONIC AMINO ACID TRANSPORTER 6)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.O.I.C.G.H.G.
12.599.38.4At1g62900842591O-methyltransferase, putativeF:O-methyltransferase activity;P:unknown;C:cytosol;PBFOMO.I.C.G.H.G.
12.499.3190.3At4g21830828271methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:response to singlet oxygen;C:cellular_component unknown;OBMPFAVO.I.C.G.H.G.
12.499.3100.6At4g14010827037RALFL32 (ralf-like 32)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.C.G.H.G.
12.499.366.4At4g28270828942zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPFOVO.I.C.G.H.G.
12.499.341.5At3g60070825177-F:molecular_function unknown;P:biological_process unknown;C:membrane;BOMPFO.I.C.G.H.G.
12.399.3147.1At5g45280834564pectinacetylesterase, putativeF:carboxylesterase activity;P:biological_process unknown;C:cell wall;PMOBAO.I.C.G.H.G.
12.399.310.9At1g19510838537ATRL5 (ARABIDOPSIS RAD-LIKE 5)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;PMOO.I.C.G.H.G.
12.299.354.2At1g62770842576invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
12.299.352.5At1g06080837117ADS1 (DELTA 9 DESATURASE 1)homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature.O.I.C.G.H.G.
12.199.3135.5At1g25230839105purple acid phosphatase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:endomembrane system;MOBPFO.I.C.G.H.G.
12.199.362.4At4g25260828629invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:shade avoidance;C:endomembrane system;PO.I.C.G.H.G.
11.999.323.8At5g23460832412unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.699.396.5At1g13280837888AOC4 (ALLENE OXIDE CYCLASE 4)Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway.O.I.C.G.H.G.
11.599.348.3At5g06720830561peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMVO.I.C.G.H.G.
11.499.3254.2At4g22212828313-Encodes a defensin-like (DEFL) family protein.O.I.C.G.H.G.
11.499.3183.4At3g12610820441DRT100 (DNA-DAMAGE REPAIR/TOLERATION 100)Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.O.I.C.G.H.G.
11.399.3100.4At4g18970827632GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
11.299.218.4At1g06850837197AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBVO.I.C.G.H.G.
11.099.2118.3At2g02990814828RNS1 (RIBONUCLEASE 1)member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.O.I.C.G.H.G.
11.099.216.4At1g06930837204unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.C.G.H.G.
11.099.212.6At5g67020836837unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO.I.C.G.H.G.
10.899.210.8At1g01390837790UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOFO.I.C.G.H.G.



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