CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1451-raw-cel-1585200362

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
606.1 100.0 270.9 At1g65480 842859 FT (FLOWERING LOCUS T) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. O.I. C.G. H.G.
342.9 100.0 88.8 At2g36710 818243 pectinesterase family protein F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;MOPBFVA O.I. C.G. H.G.
331.1 100.0 65.5 At4g28500 828968 ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73) F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;PO O.I. C.G. H.G.
323.4 100.0 101.3 At1g27380 839627 RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined. O.I. C.G. H.G.
316.1 100.0 64.3 At1g59730 842266 ATH7 (thioredoxin H-type 7) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
292.1 100.0 55.0 At1g63910 842694 AtMYB103 (myb domain protein 103) member of MYB3R- and R2R3- type MYB- encoding genes O.I. C.G. H.G.
281.5 100.0 138.3 At5g38180 833798 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
258.7 100.0 210.2 At3g62020 825375 GLP10 (GERMIN-LIKE PROTEIN 10) germin-like protein (GLP10) O.I. C.G. H.G.
218.5 100.0 256.7 At3g19550 821491 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
212.6 100.0 56.9 At1g32770 840171 ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12) Encodes SND1, a NAC Domain transcription factor involved in secondary wall biosynthesis in fibers. Expressed specifically in interfascicular fibers and xylary fibers in stems. Expressed in the procambium of stem inflorescences and root. May act as a negative regulator of secondary wall thickening in xylary fibers. Acts redundantly with NST1 to control development of secondary walls in siliques. O.I. C.G. H.G.
207.9 100.0 85.1 At3g57510 824918 ADPG1 Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. O.I. C.G. H.G.
193.7 100.0 101.1 At1g61810 842478 BGLU45 (BETA-GLUCOSIDASE 45) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
186.3 100.0 81.6 At3g50220 824184 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
182.8 100.0 25.7 At5g37730 833751 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
169.6 100.0 186.5 At4g27435 828852 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
169.3 100.0 178.7 At5g60020 836124 LAC17 (laccase 17) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
165.6 100.0 137.9 At3g59845 825154 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOFMPA O.I. C.G. H.G.
162.7 99.9 204.1 At1g22480 838854 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PFO O.I. C.G. H.G.
159.0 99.9 96.1 At5g47530 834803 auxin-responsive protein, putative F:unknown;P:multicellular organismal development;C:membrane;PMFOB O.I. C.G. H.G.
156.8 99.9 83.4 At3g18660 821397 PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. O.I. C.G. H.G.
148.2 99.9 81.6 At1g50650 841487 stigma-specific Stig1 family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPFOM O.I. C.G. H.G.
136.1 99.9 133.7 At5g15630 831417 IRX6 Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. O.I. C.G. H.G.
123.9 99.9 58.8 At2g41610 818759 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
122.1 99.9 103.3 At2g37090 818285 IRX9 (IRREGULAR XYLEM 9) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis. O.I. C.G. H.G.
120.7 99.9 35.2 At5g26120 832681 ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2) F:hydrolase activity, acting on glycosyl bonds, alpha-N-arabinofuranosidase activity;P:L-arabinose metabolic process;C:endomembrane system;BFPO O.I. C.G. H.G.
117.0 99.9 65.7 At3g15050 820734 IQD10 (IQ-domain 10) F:calmodulin binding;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
114.9 99.9 106.9 At1g27440 839635 GUT2 F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:endomembrane system, membrane;PMOBF O.I. C.G. H.G.
114.6 99.9 96.6 At3g08900 820039 RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3) Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells. O.I. C.G. H.G.
114.3 99.9 31.9 At1g09610 837488 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB O.I. C.G. H.G.
113.3 99.9 109.4 At5g67210 836856 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
112.6 99.9 49.4 At5g22810 832344 GDSL-motif lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
104.7 99.9 155.1 At4g18780 827612 IRX1 (IRREGULAR XYLEM 1) Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. O.I. C.G. H.G.
102.6 99.9 209.8 At3g16920 820947 chitinase F:chitinase activity;P:cell wall macromolecule catabolic process;C:unknown;PBMOF O.I. C.G. H.G.
97.9 99.9 98.9 At5g57920 835903 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
97.1 99.9 83.5 At2g21220 816659 auxin-responsive protein, putative F:calmodulin binding;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
96.9 99.9 78.3 At2g29130 817462 LAC2 (laccase 2) putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration O.I. C.G. H.G.
96.7 99.9 16.7 At3g61910 825364 ANAC066 (ARABIDOPSIS NAC DOMAIN PROTEIN 66) NAC transcription factor NST2. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls. NST2 promoter was particularly strong in anther tissue. O.I. C.G. H.G.
96.1 99.9 16.8 At2g46770 819290 EMB2301 (EMBRYO DEFECTIVE 2301) NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop. O.I. C.G. H.G.
95.8 99.9 26.3 At1g16490 838219 MYB58 (MYB DOMAIN PROTEIN 58) Member of the R2R3 factor gene family. O.I. C.G. H.G.
89.9 99.9 87.8 At1g16510 838221 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
87.5 99.9 21.8 At4g28380 828954 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA O.I. C.G. H.G.
85.0 99.9 107.7 At5g54690 835558 GAUT12 (GALACTURONOSYLTRANSFERASE 12) Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). O.I. C.G. H.G.
84.6 99.9 138.3 At3g24250 822012 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVA O.I. C.G. H.G.
84.1 99.9 38.8 At1g79180 844259 MYB63 (MYB DOMAIN PROTEIN 63) Member of the R2R3 factor gene family. O.I. C.G. H.G.
83.4 99.9 34.0 At1g31720 840059 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
82.9 99.9 51.7 At1g62280 842525 SLAH1 (SLAC1 HOMOLOGUE 1) Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane. O.I. C.G. H.G.
82.6 99.9 138.5 At2g03200 814849 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO O.I. C.G. H.G.
82.2 99.9 83.9 At5g40020 833999 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO O.I. C.G. H.G.
81.9 99.9 42.7 At1g68170 843145 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;PBOAM O.I. C.G. H.G.
81.1 99.9 206.3 At5g03170 831914 FLA11 F:unknown;P:unknown;C:anchored to membrane;PBOMAF O.I. C.G. H.G.
79.5 99.9 31.8 At3g45870 823730 integral membrane family protein / nodulin MtN21-related F:unknown;P:unknown;C:membrane;BPOAMF O.I. C.G. H.G.
76.3 99.9 64.1 At5g01360 830298 - F:unknown;P:unknown;C:unknown;PMF O.I. C.G. H.G.
74.9 99.9 211.9 At3g20210 821565 DELTA-VPE Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat. O.I. C.G. H.G.
71.9 99.9 65.2 At1g73040 843635 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO O.I. C.G. H.G.
71.5 99.9 53.5 At1g56720 842128 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
69.9 99.9 173.1 At5g44030 834426 CESA4 (CELLULOSE SYNTHASE A4) Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. O.I. C.G. H.G.
68.0 99.9 126.3 At3g59010 825070 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
68.0 99.9 32.6 At1g09440 837467 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
67.6 99.9 187.2 At5g51890 835264 peroxidase encodes peroxidase involved in the lignification of tracheary elements (TE) in roots O.I. C.G. H.G.
67.4 99.8 21.2 At1g07120 837222 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;POMFB O.I. C.G. H.G.
62.8 99.8 32.8 At1g79420 844280 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
61.0 99.8 44.9 At5g57520 835856 ZFP2 (ZINC FINGER PROTEIN 2) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
59.6 99.8 170.7 At3g10340 820196 PAL4 (Phenylalanine ammonia-lyase 4) F:ammonia-lyase activity, ammonia ligase activity, catalytic activity;P:L-phenylalanine catabolic process, biosynthetic process;C:cytoplasm;BPOFMA O.I. C.G. H.G.
59.0 99.8 192.4 At1g04660 839454 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
55.8 99.8 214.2 At1g56100 842062 pectinesterase inhibitor domain-containing protein F:enzyme inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;OMFPBAV O.I. C.G. H.G.
55.3 99.8 19.5 At2g47670 819380 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
54.6 99.8 23.1 At2g31930 817751 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
49.9 99.8 37.3 At1g19940 838583 AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
48.8 99.8 14.7 At4g22680 828364 MYB85 (myb domain protein 85) Encodes a putative transcription factor (MYB85). O.I. C.G. H.G.
46.2 99.8 58.4 At4g26220 828728 caffeoyl-CoA 3-O-methyltransferase, putative F:O-methyltransferase activity;P:unknown;C:cytosol;BOPMFA O.I. C.G. H.G.
45.8 99.8 26.2 At5g25390 832611 SHN2 (shine2) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. O.I. C.G. H.G.
45.7 99.8 108.3 At5g17420 831608 IRX3 (IRREGULAR XYLEM 3) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181). O.I. C.G. H.G.
44.9 99.8 43.0 At1g19170 838500 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:mitochondrion;FPBOMA O.I. C.G. H.G.
43.3 99.8 72.2 At1g78970 844237 LUP1 (LUPEOL SYNTHASE 1) Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation. O.I. C.G. H.G.
43.2 99.8 45.6 At2g15310 816020 ATARFB1A (ADP-ribosylation factor B1A) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor (GI:861205) (Chlamydomonas reinhardtii), other ARFs and ARF-like proteins. O.I. C.G. H.G.
42.8 99.8 18.5 At2g01660 814695 PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. O.I. C.G. H.G.
42.4 99.8 138.0 At5g59845 836106 gibberellin-regulated family protein F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P O.I. C.G. H.G.
42.4 99.8 23.8 At1g72220 843554 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
41.8 99.8 27.4 At5g60720 836193 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM O.I. C.G. H.G.
41.1 99.8 101.2 At4g33790 829521 CER4 (ECERIFERUM 4) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. O.I. C.G. H.G.
40.4 99.8 33.8 At1g34580 840362 monosaccharide transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
40.0 99.8 49.7 At1g08340 837354 rac GTPase activating protein, putative F:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPVBA O.I. C.G. H.G.
39.4 99.8 48.5 At4g37050 829859 PLP4 (PATATIN-LIKE PROTEIN 4) F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMF O.I. C.G. H.G.
39.1 99.8 16.3 At5g39130 833906 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB O.I. C.G. H.G.
38.9 99.8 42.9 At1g71250 843466 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
38.5 99.8 67.4 At5g15800 831436 SEP1 (SEPALLATA1) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. O.I. C.G. H.G.
38.4 99.8 86.9 At1g73630 843697 calcium-binding protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
38.2 99.8 25.7 At3g50990 824263 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO O.I. C.G. H.G.
37.5 99.7 220.2 At5g42180 834223 peroxidase 64 (PER64) (P64) (PRXR4) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBM O.I. C.G. H.G.
36.5 99.7 80.5 At1g74660 843805 MIF1 (MINI ZINC FINGER 1) Constitutive overexpression of MIF1 caused dramatic developmental defects, seedlings were non-responsive to gibberellin (GA) for cell elongation, hypersensitive to the GA synthesis inhibitor paclobutrazol (PAC) and abscisic acid (ABA), and hyposensitive to auxin, brassinosteroid and cytokinin, but normally responsive to ethylene. O.I. C.G. H.G.
36.4 99.7 140.7 At3g21190 821672 unknown protein F:unknown;P:unknown;C:Golgi apparatus;P O.I. C.G. H.G.
36.4 99.7 11.9 At5g52500 835326 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
35.5 99.7 44.4 At5g06930 830584 - F:unknown;P:unknown;C:chloroplast;OMBFPVA O.I. C.G. H.G.
35.0 99.7 136.2 At1g17620 838339 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
34.9 99.7 20.5 At5g39090 833901 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO O.I. C.G. H.G.
34.6 99.7 247.3 At5g57800 835889 CER3 (ECERIFERUM 3) encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. O.I. C.G. H.G.
34.6 99.7 152.8 At1g75900 843923 family II extracellular lipase 3 (EXL3) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
34.4 99.7 8.1 At1g64130 842717 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
33.9 99.7 71.1 At1g47960 841214 C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1) Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. O.I. C.G. H.G.
33.9 99.7 61.9 At1g19300 838512 PARVUS (PARVUS) The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
606.1	100.0	270.9	At1g65480	842859	FT (FLOWERING LOCUS T)	FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.	O.I.	C.G.	H.G.
342.9	100.0	88.8	At2g36710	818243	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;MOPBFVA	O.I.	C.G.	H.G.
331.1	100.0	65.5	At4g28500	828968	ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73)	F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;PO	O.I.	C.G.	H.G.
323.4	100.0	101.3	At1g27380	839627	RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined.	O.I.	C.G.	H.G.
316.1	100.0	64.3	At1g59730	842266	ATH7 (thioredoxin H-type 7)	F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
292.1	100.0	55.0	At1g63910	842694	AtMYB103 (myb domain protein 103)	member of MYB3R- and R2R3- type MYB- encoding genes	O.I.	C.G.	H.G.
281.5	100.0	138.3	At5g38180	833798	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
258.7	100.0	210.2	At3g62020	825375	GLP10 (GERMIN-LIKE PROTEIN 10)	germin-like protein (GLP10)	O.I.	C.G.	H.G.
218.5	100.0	256.7	At3g19550	821491	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
212.6	100.0	56.9	At1g32770	840171	ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12)	Encodes SND1, a NAC Domain transcription factor involved in secondary wall biosynthesis in fibers. Expressed specifically in interfascicular fibers and xylary fibers in stems. Expressed in the procambium of stem inflorescences and root. May act as a negative regulator of secondary wall thickening in xylary fibers. Acts redundantly with NST1 to control development of secondary walls in siliques.	O.I.	C.G.	H.G.
207.9	100.0	85.1	At3g57510	824918	ADPG1	Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.	O.I.	C.G.	H.G.
193.7	100.0	101.1	At1g61810	842478	BGLU45 (BETA-GLUCOSIDASE 45)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
186.3	100.0	81.6	At3g50220	824184	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
182.8	100.0	25.7	At5g37730	833751	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
169.6	100.0	186.5	At4g27435	828852	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
169.3	100.0	178.7	At5g60020	836124	LAC17 (laccase 17)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
165.6	100.0	137.9	At3g59845	825154	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOFMPA	O.I.	C.G.	H.G.
162.7	99.9	204.1	At1g22480	838854	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PFO	O.I.	C.G.	H.G.
159.0	99.9	96.1	At5g47530	834803	auxin-responsive protein, putative	F:unknown;P:multicellular organismal development;C:membrane;PMFOB	O.I.	C.G.	H.G.
156.8	99.9	83.4	At3g18660	821397	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)	Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.	O.I.	C.G.	H.G.
148.2	99.9	81.6	At1g50650	841487	stigma-specific Stig1 family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPFOM	O.I.	C.G.	H.G.
136.1	99.9	133.7	At5g15630	831417	IRX6	Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.	O.I.	C.G.	H.G.
123.9	99.9	58.8	At2g41610	818759	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
122.1	99.9	103.3	At2g37090	818285	IRX9 (IRREGULAR XYLEM 9)	The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.	O.I.	C.G.	H.G.
120.7	99.9	35.2	At5g26120	832681	ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2)	F:hydrolase activity, acting on glycosyl bonds, alpha-N-arabinofuranosidase activity;P:L-arabinose metabolic process;C:endomembrane system;BFPO	O.I.	C.G.	H.G.
117.0	99.9	65.7	At3g15050	820734	IQD10 (IQ-domain 10)	F:calmodulin binding;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
114.9	99.9	106.9	At1g27440	839635	GUT2	F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:endomembrane system, membrane;PMOBF	O.I.	C.G.	H.G.
114.6	99.9	96.6	At3g08900	820039	RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3)	Encodes a reversible autoglycosylated protein peripherally associated with cell membranes. Highly expressed in roots ans suspension-cultured cells.	O.I.	C.G.	H.G.
114.3	99.9	31.9	At1g09610	837488	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB	O.I.	C.G.	H.G.
113.3	99.9	109.4	At5g67210	836856	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
112.6	99.9	49.4	At5g22810	832344	GDSL-motif lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
104.7	99.9	155.1	At4g18780	827612	IRX1 (IRREGULAR XYLEM 1)	Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.	O.I.	C.G.	H.G.
102.6	99.9	209.8	At3g16920	820947	chitinase	F:chitinase activity;P:cell wall macromolecule catabolic process;C:unknown;PBMOF	O.I.	C.G.	H.G.
97.9	99.9	98.9	At5g57920	835903	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
97.1	99.9	83.5	At2g21220	816659	auxin-responsive protein, putative	F:calmodulin binding;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
96.9	99.9	78.3	At2g29130	817462	LAC2 (laccase 2)	putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration	O.I.	C.G.	H.G.
96.7	99.9	16.7	At3g61910	825364	ANAC066 (ARABIDOPSIS NAC DOMAIN PROTEIN 66)	NAC transcription factor NST2. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls. NST2 promoter was particularly strong in anther tissue.	O.I.	C.G.	H.G.
96.1	99.9	16.8	At2g46770	819290	EMB2301 (EMBRYO DEFECTIVE 2301)	NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.	O.I.	C.G.	H.G.
95.8	99.9	26.3	At1g16490	838219	MYB58 (MYB DOMAIN PROTEIN 58)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
89.9	99.9	87.8	At1g16510	838221	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
87.5	99.9	21.8	At4g28380	828954	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA	O.I.	C.G.	H.G.
85.0	99.9	107.7	At5g54690	835558	GAUT12 (GALACTURONOSYLTRANSFERASE 12)	Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).	O.I.	C.G.	H.G.
84.6	99.9	138.3	At3g24250	822012	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMPOFVA	O.I.	C.G.	H.G.
84.1	99.9	38.8	At1g79180	844259	MYB63 (MYB DOMAIN PROTEIN 63)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
83.4	99.9	34.0	At1g31720	840059	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
82.9	99.9	51.7	At1g62280	842525	SLAH1 (SLAC1 HOMOLOGUE 1)	Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane.	O.I.	C.G.	H.G.
82.6	99.9	138.5	At2g03200	814849	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO	O.I.	C.G.	H.G.
82.2	99.9	83.9	At5g40020	833999	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO	O.I.	C.G.	H.G.
81.9	99.9	42.7	At1g68170	843145	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;PBOAM	O.I.	C.G.	H.G.
81.1	99.9	206.3	At5g03170	831914	FLA11	F:unknown;P:unknown;C:anchored to membrane;PBOMAF	O.I.	C.G.	H.G.
79.5	99.9	31.8	At3g45870	823730	integral membrane family protein / nodulin MtN21-related	F:unknown;P:unknown;C:membrane;BPOAMF	O.I.	C.G.	H.G.
76.3	99.9	64.1	At5g01360	830298	-	F:unknown;P:unknown;C:unknown;PMF	O.I.	C.G.	H.G.
74.9	99.9	211.9	At3g20210	821565	DELTA-VPE	Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.	O.I.	C.G.	H.G.
71.9	99.9	65.2	At1g73040	843635	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO	O.I.	C.G.	H.G.
71.5	99.9	53.5	At1g56720	842128	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
69.9	99.9	173.1	At5g44030	834426	CESA4 (CELLULOSE SYNTHASE A4)	Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.	O.I.	C.G.	H.G.
68.0	99.9	126.3	At3g59010	825070	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
68.0	99.9	32.6	At1g09440	837467	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
67.6	99.9	187.2	At5g51890	835264	peroxidase	encodes peroxidase involved in the lignification of tracheary elements (TE) in roots	O.I.	C.G.	H.G.
67.4	99.8	21.2	At1g07120	837222	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;POMFB	O.I.	C.G.	H.G.
62.8	99.8	32.8	At1g79420	844280	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
61.0	99.8	44.9	At5g57520	835856	ZFP2 (ZINC FINGER PROTEIN 2)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
59.6	99.8	170.7	At3g10340	820196	PAL4 (Phenylalanine ammonia-lyase 4)	F:ammonia-lyase activity, ammonia ligase activity, catalytic activity;P:L-phenylalanine catabolic process, biosynthetic process;C:cytoplasm;BPOFMA	O.I.	C.G.	H.G.
59.0	99.8	192.4	At1g04660	839454	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
55.8	99.8	214.2	At1g56100	842062	pectinesterase inhibitor domain-containing protein	F:enzyme inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;OMFPBAV	O.I.	C.G.	H.G.
55.3	99.8	19.5	At2g47670	819380	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
54.6	99.8	23.1	At2g31930	817751	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
49.9	99.8	37.3	At1g19940	838583	AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
48.8	99.8	14.7	At4g22680	828364	MYB85 (myb domain protein 85)	Encodes a putative transcription factor (MYB85).	O.I.	C.G.	H.G.
46.2	99.8	58.4	At4g26220	828728	caffeoyl-CoA 3-O-methyltransferase, putative	F:O-methyltransferase activity;P:unknown;C:cytosol;BOPMFA	O.I.	C.G.	H.G.
45.8	99.8	26.2	At5g25390	832611	SHN2 (shine2)	encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.	O.I.	C.G.	H.G.
45.7	99.8	108.3	At5g17420	831608	IRX3 (IRREGULAR XYLEM 3)	Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).	O.I.	C.G.	H.G.
44.9	99.8	43.0	At1g19170	838500	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:mitochondrion;FPBOMA	O.I.	C.G.	H.G.
43.3	99.8	72.2	At1g78970	844237	LUP1 (LUPEOL SYNTHASE 1)	Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17β-dammarenyl cation.	O.I.	C.G.	H.G.
43.2	99.8	45.6	At2g15310	816020	ATARFB1A (ADP-ribosylation factor B1A)	A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor (GI:861205) (Chlamydomonas reinhardtii), other ARFs and ARF-like proteins.	O.I.	C.G.	H.G.
42.8	99.8	18.5	At2g01660	814695	PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)	Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.	O.I.	C.G.	H.G.
42.4	99.8	138.0	At5g59845	836106	gibberellin-regulated family protein	F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P	O.I.	C.G.	H.G.
42.4	99.8	23.8	At1g72220	843554	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
41.8	99.8	27.4	At5g60720	836193	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM	O.I.	C.G.	H.G.
41.1	99.8	101.2	At4g33790	829521	CER4 (ECERIFERUM 4)	Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.	O.I.	C.G.	H.G.
40.4	99.8	33.8	At1g34580	840362	monosaccharide transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
40.0	99.8	49.7	At1g08340	837354	rac GTPase activating protein, putative	F:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPVBA	O.I.	C.G.	H.G.
39.4	99.8	48.5	At4g37050	829859	PLP4 (PATATIN-LIKE PROTEIN 4)	F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMF	O.I.	C.G.	H.G.
39.1	99.8	16.3	At5g39130	833906	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB	O.I.	C.G.	H.G.
38.9	99.8	42.9	At1g71250	843466	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, lipase activity, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
38.5	99.8	67.4	At5g15800	831436	SEP1 (SEPALLATA1)	Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.	O.I.	C.G.	H.G.
38.4	99.8	86.9	At1g73630	843697	calcium-binding protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
38.2	99.8	25.7	At3g50990	824263	electron carrier/ heme binding / peroxidase	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO	O.I.	C.G.	H.G.
37.5	99.7	220.2	At5g42180	834223	peroxidase 64 (PER64) (P64) (PRXR4)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBM	O.I.	C.G.	H.G.
36.5	99.7	80.5	At1g74660	843805	MIF1 (MINI ZINC FINGER 1)	Constitutive overexpression of MIF1 caused dramatic developmental defects, seedlings were non-responsive to gibberellin (GA) for cell elongation, hypersensitive to the GA synthesis inhibitor paclobutrazol (PAC) and abscisic acid (ABA), and hyposensitive to auxin, brassinosteroid and cytokinin, but normally responsive to ethylene.	O.I.	C.G.	H.G.
36.4	99.7	140.7	At3g21190	821672	unknown protein	F:unknown;P:unknown;C:Golgi apparatus;P	O.I.	C.G.	H.G.
36.4	99.7	11.9	At5g52500	835326	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
35.5	99.7	44.4	At5g06930	830584	-	F:unknown;P:unknown;C:chloroplast;OMBFPVA	O.I.	C.G.	H.G.
35.0	99.7	136.2	At1g17620	838339	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
34.9	99.7	20.5	At5g39090	833901	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO	O.I.	C.G.	H.G.
34.6	99.7	247.3	At5g57800	835889	CER3 (ECERIFERUM 3)	encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.	O.I.	C.G.	H.G.
34.6	99.7	152.8	At1g75900	843923	family II extracellular lipase 3 (EXL3)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
34.4	99.7	8.1	At1g64130	842717	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
33.9	99.7	71.1	At1g47960	841214	C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)	Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.	O.I.	C.G.	H.G.
33.9	99.7	61.9	At1g19300	838512	PARVUS (PARVUS)	The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	-
Assay name	E-MEXP-1451-raw-cel-1585200362
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1451-raw-cel-1585200362 GSE experiment -

GSM ID -

Assay name E-MEXP-1451-raw-cel-1585200362

GSE experiment -