Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1443-raw-cel-1581869863
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1381.9100.0266.8At4g21440826916ATMYB102 (ARABIDOPSIS MYB-LIKE 102)Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.O.I.C.G.H.G.
641.4100.0147.6At4g18170827542WRKY28member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
626.0100.0186.1At1g64380842745AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.O.I.C.G.H.G.
562.4100.077.6At5g59510836070RTFL5 (ROTUNDIFOLIA LIKE 5)F:molecular_function unknown;P:shoot development;C:cellular_component unknown;PMFOBO.I.C.G.H.G.
399.7100.0138.2At4g05100825855AtMYB74 (myb domain protein 74)Member of the R2R3 factor gene family.O.I.C.G.H.G.
372.9100.065.8At5g17000831563NADP-dependent oxidoreductase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPAO.I.C.G.H.G.
328.3100.0222.0At5g49520835012WRKY48member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
251.1100.0107.6At5g46330834676FLS2 (FLAGELLIN-SENSITIVE 2)Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.O.I.C.G.H.G.
250.2100.0239.6At5g52050835280MATE efflux protein-relatedF:drug transporter activity, antiporter activity;P:multidrug transport;C:membrane;BOPFAMO.I.C.G.H.G.
243.9100.0278.6At1g02400839508GA2OX6 (GIBBERELLIN 2-OXIDASE 6)Encodes a gibberellin 2-oxidase.O.I.C.G.H.G.
240.3100.0205.7At5g65300836655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
236.8100.0348.9At1g17420838314LOX3LipoxygenaseO.I.C.G.H.G.
193.8100.0252.6At2g02000814731GAD3 (glutamate decarboxylase 3)F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAVO.I.C.G.H.G.
191.5100.0190.4At1g21980838801ATPIP5K1 (PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1)Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.O.I.C.G.H.G.
191.0100.0120.6At5g54300835518unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOFBAO.I.C.G.H.G.
188.4100.0247.2At1g75860843919unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBO.I.C.G.H.G.
187.3100.0155.2At1g76070843939unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFO.I.C.G.H.G.
180.1100.0124.8At5g07320830623mitochondrial substrate carrier family proteinF:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, membrane;MFPOBVO.I.C.G.H.G.
167.4100.0240.9At3g28210822447PMZEncodes a putative zinc finger protein (PMZ).O.I.C.G.H.G.
156.199.9124.2At4g21390827891B120F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
151.699.9117.4At1g09940837528HEMA2Encodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteinsO.I.C.G.H.G.
140.899.9212.1At2g16900816192-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POMVFBAO.I.C.G.H.G.
137.199.9328.0At3g06500819828beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeF:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPBO.I.C.G.H.G.
128.699.9263.4At1g15430838114-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
123.099.9254.4At5g12010831074unknown proteinF:unknown;P:response to salt stress;C:chloroplast, plasma membrane, membrane;MPFOO.I.C.G.H.G.
122.199.9179.3At2g31945817753unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
122.199.991.5At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAO.I.C.G.H.G.
121.999.9162.2At1g66160842931U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVO.I.C.G.H.G.
119.799.9235.2At2g39660818549BIK1 (BOTRYTIS-INDUCED KINASE1)Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.O.I.C.G.H.G.
115.999.971.1At2g36590818232ProT3 (PROLINE TRANSPORTER 3)Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed in leaves, flowers and siliques but to a much lesser extent in roots.O.I.C.G.H.G.
108.299.9299.5At5g54170835505-F:molecular_function unknown;P:response to wounding;C:unknown;MPOO.I.C.G.H.G.
107.999.9123.1At1g22810838887AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.O.I.C.G.H.G.
102.799.949.0At3g21070821659NADK1 (NAD KINASE 1)Encodes a protein with NAD(H) kinase activity.O.I.C.G.H.G.
100.699.9157.4At1g66500842968zinc finger (C2H2-type) family proteinF:zinc ion binding;P:biological_process unknown;C:intracellular;MFOPO.I.C.G.H.G.
100.499.9179.6At5g53050835385hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOMPFAVO.I.C.G.H.G.
99.699.9260.2At1g71697843500ATCK1 (CHOLINE KINASE 1)Encodes choline kinase. mRNA levels are increased in response to wounding.O.I.C.G.H.G.
98.399.9292.5At3g48520824011CYP94B3member of CYP94BO.I.C.G.H.G.
97.499.9359.7At4g37990829955ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.O.I.C.G.H.G.
96.599.9418.2At3g07390819927AIR12isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.O.I.C.G.H.G.
95.799.9202.3At4g18950827630ankyrin protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:nucleus, cytoplasm;MOPBFVAO.I.C.G.H.G.
88.599.9375.7At1g61890842485MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
87.099.999.8At2g24240816958potassium channel tetramerisation domain-containing proteinF:protein binding, voltage-gated potassium channel activity;P:potassium ion transport;C:voltage-gated potassium channel complex, membrane;MPOFO.I.C.G.H.G.
86.699.924.4At3g57760824945protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOFBVO.I.C.G.H.G.
86.599.9246.1At3g51660824329macrophage migration inhibitory factor family protein / MIF family proteinF:molecular_function unknown;P:inflammatory response, response to other organism;C:peroxisome;MPOBO.I.C.G.H.G.
86.399.961.2At2g20880816622AP2 domain-containing transcription factor, putativeF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, cytoplasm;POMBFVO.I.C.G.H.G.
86.299.989.7At1g21010838695unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
85.799.927.0At2g23770816909protein kinase family protein / peptidoglycan-binding LysM domain-containing proteinF:kinase activity;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
85.299.920.1At2g02060814737transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POO.I.C.G.H.G.
84.699.9108.6At5g04250830304OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVBO.I.C.G.H.G.
84.199.963.7At2g39360818521protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
82.599.917.8At5g48530834909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
80.299.9369.8At4g24380828540unknown proteinF:unknown;P:10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process;C:unknown;FMPOBO.I.C.G.H.G.
79.399.9172.6At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
78.699.9149.6At5g62520836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.O.I.C.G.H.G.
78.099.941.7At2g25460817084-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
77.099.996.6At3g28850822517glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:plasma membrane;PMOBFO.I.C.G.H.G.
75.999.9162.2At5g42380834244CML37 (CALMODULIN LIKE 37)F:calcium ion binding;P:response to ozone;C:chloroplast;MPOFBVO.I.C.G.H.G.
75.799.930.6At5g44210834444ERF9 (ERF DOMAIN PROTEIN 9)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.O.I.C.G.H.G.
75.399.9182.9At1g07000837210ATEXO70B2 (exocyst subunit EXO70 family protein B2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
74.899.9215.0At3g25780822169AOC3 (ALLENE OXIDE CYCLASE 3)Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.O.I.C.G.H.G.
72.999.9290.5At3g47960823951proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFOO.I.C.G.H.G.
72.399.9232.7At1g22400838846UGT85A1F:in 6 functions;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
72.399.9206.9At2g30040817555MAPKKK14member of MEKK subfamilyO.I.C.G.H.G.
72.299.9570.0At4g01870828228tolB protein-relatedF:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;OBPFAMO.I.C.G.H.G.
72.199.950.9At4g28350828950lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
70.499.9187.5At3g04010819556glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOBO.I.C.G.H.G.
69.299.9160.6At4g31550829282WRKY11member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.O.I.C.G.H.G.
68.799.9206.0At1g15010838066unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO.I.C.G.H.G.
67.599.854.8At5g63450836464CYP94B1member of CYP94BO.I.C.G.H.G.
65.799.8336.2At1g10370837576ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)F:glutathione transferase activity;P:response to water deprivation, toxin catabolic process;C:chloroplast, cytoplasm;BPOMFO.I.C.G.H.G.
65.599.899.8At1g78070844142-F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;PFOO.I.C.G.H.G.
64.799.830.5At4g22980828397-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBAO.I.C.G.H.G.
63.099.8148.7At4g18880827622AT-HSFA4Amember of Heat Stress Transcription Factor (Hsf) familyO.I.C.G.H.G.
62.599.825.4At5g40460834044unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
61.999.837.0At1g07590837272pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:response to cadmium ion;C:mitochondrion;POMFBO.I.C.G.H.G.
61.399.8127.5At3g04620819620nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
60.399.881.5At1g79410844279AtOCT5 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER5)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:integral to membrane, membrane;MBFPOAO.I.C.G.H.G.
60.099.8318.8At3g23920821975BAM1 (BETA-AMYLASE 1)Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.O.I.C.G.H.G.
59.999.834.9At2g40180818609ATHPP2C5F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVAO.I.C.G.H.G.
59.899.851.2At3g55740824740PROT2 (PROLINE TRANSPORTER 2)Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.O.I.C.G.H.G.
59.399.8239.6At2g46370819244JAR1 (JASMONATE RESISTANT 1)Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.O.I.C.G.H.G.
58.199.8141.7At1g73080843639PEPR1 (PEP1 receptor 1)Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks.O.I.C.G.H.G.
57.999.8148.0At2g01180814646ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.O.I.C.G.H.G.
57.599.8152.2At3g10300820192calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBVO.I.C.G.H.G.
57.499.868.1At4g33930829538glycine-rich proteinEncodes a protein with 14.6% glycine residues, similar to hyphally regulated protein from Candida albicans, PIR2:S58135O.I.C.G.H.G.
57.099.860.7At1g74360843777leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVAO.I.C.G.H.G.
54.599.852.9At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
53.999.837.8At1g07160837227protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:chloroplast, protein serine/threonine phosphatase complex;MPOFBVAO.I.C.G.H.G.
53.599.8226.1At3g04640819622glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAO.I.C.G.H.G.
53.299.8355.0At1g76600843993unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:nucleolus, nucleus;PO.I.C.G.H.G.
51.699.8586.1At5g160108314583-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family proteinF:oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity;P:lipid metabolic process;C:chloroplast, chloroplast envelope;MOFPBO.I.C.G.H.G.
51.499.8425.7At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.O.I.C.G.H.G.
50.799.8367.6At3g05500819715rubber elongation factor (REF) family proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
49.699.8106.1At4g02410828032lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
48.899.8279.0At3g02880821198leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall;PMOBFVAO.I.C.G.H.G.
48.599.8237.7At4g39670830121glycolipid binding / glycolipid transporterF:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MPOFO.I.C.G.H.G.
48.099.8287.3At2g29450817494ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002)O.I.C.G.H.G.
47.699.895.4At5g56980835800unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
47.699.879.8At4g35600829712CONNEXIN 32plant-type connexin (gap junction-type protein), a component of plasmodesmataO.I.C.G.H.G.
47.599.8104.4At4g17615827481CBL1 (CALCINEURIN B-LIKE PROTEIN 1)Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.O.I.C.G.H.G.



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