CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1299-raw-cel-1519903415

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
63.0 99.8 114.9 At5g01740 831686 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
56.8 99.8 50.5 At2g42870 818887 PAR1 (PHY RAPIDLY REGULATED 1) Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510). O.I. C.G. H.G.
43.0 99.8 89.1 At5g02540 831913 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
39.8 99.8 159.4 At3g45300 823668 IVD (ISOVALERYL-COA-DEHYDROGENASE) Encodes isovaleryl-coenzyme a dehydrogenase. O.I. C.G. H.G.
36.9 99.7 80.1 At1g02340 839300 HFR1 (LONG HYPOCOTYL IN FAR-RED) Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1. O.I. C.G. H.G.
33.5 99.7 42.0 At1g34760 840380 GRF11 (GENERAL REGULATORY FACTOR 11) Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light. O.I. C.G. H.G.
32.2 99.7 90.7 At1g21400 838739 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
28.3 99.7 175.0 At1g03090 838362 MCCA MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. O.I. C.G. H.G.
25.7 99.7 361.9 At3g47340 823888 ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. C.G. H.G.
25.5 99.7 275.3 At2g39570 818542 ACT domain-containing protein F:amino acid binding;P:metabolic process;C:unknown;POB O.I. C.G. H.G.
23.6 99.6 65.6 At1g54740 841915 - F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBF O.I. C.G. H.G.
23.2 99.6 80.2 At4g38690 830025 1-phosphatidylinositol phosphodiesterase-related F:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, N-terminal protein myristoylation, lipid metabolic process;C:cellular_component unknown;BFMPO O.I. C.G. H.G.
22.9 99.6 229.6 At1g19530 838540 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
21.7 99.6 176.8 At5g02840 831766 LCL1 (LHY/CCA1-like 1) CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. O.I. C.G. H.G.
21.3 99.6 140.4 At3g06850 819869 BCE2 dihydrolipoamide branched chain acyltransferase O.I. C.G. H.G.
20.4 99.6 53.2 At1g22740 838880 RABG3B GTP-binding protein Rab7 O.I. C.G. H.G.
19.7 99.6 69.6 At3g05900 819759 neurofilament protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
18.7 99.5 18.6 At4g12690 826881 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.6 99.5 70.8 At5g01240 831866 amino acid permease, putative F:transporter activity;P:amino acid transport;C:membrane;PFMO O.I. C.G. H.G.
18.4 99.5 366.0 At2g05540 815103 glycine-rich protein F:unknown;P:unknown;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
18.2 99.5 68.6 At1g77210 844057 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BFMPOA O.I. C.G. H.G.
18.0 99.5 102.1 At5g07010 830592 ST2A (SULFOTRANSFERASE 2A) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). O.I. C.G. H.G.
18.0 99.5 64.6 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
18.0 99.5 53.6 At5g62280 836349 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
17.6 99.5 83.3 At4g28040 828919 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM O.I. C.G. H.G.
17.4 99.5 258.6 At4g14130 827051 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7) xyloglucan endotransglycosylase-related protein (XTR7) O.I. C.G. H.G.
17.2 99.5 45.6 At4g16780 827384 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. O.I. C.G. H.G.
16.6 99.5 62.3 At3g49790 824141 ATP binding F:ATP binding;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
16.4 99.5 8.4 At5g04190 830297 PKS4 (phytochrome kinase substrate 4) Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism. O.I. C.G. H.G.
16.3 99.5 60.2 At2g15695 816063 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
16.2 99.5 360.5 At5g49360 834996 BXL1 (BETA-XYLOSIDASE 1) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. O.I. C.G. H.G.
16.2 99.5 32.6 At4g32280 829361 IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29) Auxin inducible protein. O.I. C.G. H.G.
15.7 99.5 88.6 At5g56100 835709 glycine-rich protein / oleosin F:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PB O.I. C.G. H.G.
15.7 99.5 56.3 At1g76460 843979 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA O.I. C.G. H.G.
15.4 99.5 199.9 At1g58030 842170 CAT2 (CATIONIC AMINO ACID TRANSPORTER 2) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast. O.I. C.G. H.G.
15.2 99.4 32.5 At4g23870 828486 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.0 99.4 135.9 At1g06570 837168 PDS1 (PHYTOENE DESATURATION 1) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants. O.I. C.G. H.G.
15.0 99.4 130.5 At5g21170 832243 5'-AMP-activated protein kinase beta-2 subunit, putative F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB O.I. C.G. H.G.
14.9 99.4 269.7 At5g56870 835789 BGAL4 (beta-galactosidase 4) F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA O.I. C.G. H.G.
14.9 99.4 202.9 At3g62650 825439 unknown protein F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
14.5 99.4 459.9 At4g35770 829730 SEN1 (SENESCENCE 1) Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant. O.I. C.G. H.G.
14.4 99.4 132.6 At1g09570 837483 PHYA (PHYTOCHROME A) Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation. O.I. C.G. H.G.
14.2 99.4 211.0 At1g12780 837834 UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1) Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress. O.I. C.G. H.G.
14.0 99.4 116.5 At4g34030 829549 MCCB (3-METHYLCROTONYL-COA CARBOXYLASE) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. O.I. C.G. H.G.
13.9 99.4 93.1 At5g16340 831495 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
13.9 99.4 73.6 At1g14280 837989 PKS2 (PHYTOCHROME KINASE SUBSTRATE 2) Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. O.I. C.G. H.G.
13.6 99.4 120.6 At1g10070 837543 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. O.I. C.G. H.G.
13.4 99.4 214.9 At5g16110 831468 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
13.2 99.4 27.9 At5g44260 834449 zinc finger (CCCH-type) family protein F:transcription factor activity, nucleic acid binding;P:unknown;C:unknown;MOPFV O.I. C.G. H.G.
13.1 99.4 64.1 At2g45620 819170 nucleotidyltransferase family protein F:nucleotidyltransferase activity;P:biological_process unknown;C:cellular_component unknown;MOFPB O.I. C.G. H.G.
13.1 99.4 44.9 At3g19860 821523 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFBV O.I. C.G. H.G.
13.0 99.4 204.6 At5g05690 830453 CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses. O.I. C.G. H.G.
12.7 99.3 92.0 At4g17730 827494 SYP23 (SYNTAXIN OF PLANTS 23) member of SYP2 Gene Family O.I. C.G. H.G.
12.7 99.3 56.2 At2g47930 819405 AGP26 (ARABINOGALACTAN PROTEIN 26) F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OPMVBFA O.I. C.G. H.G.
12.6 99.3 24.2 At3g15070 820736 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVB O.I. C.G. H.G.
12.4 99.3 83.9 At5g60850 836206 OBP4 Encodes a zinc finger protein. O.I. C.G. H.G.
12.4 99.3 32.4 At5g66160 836748 JR700 Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. O.I. C.G. H.G.
12.3 99.3 141.6 At3g61060 825278 AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13) F:carbohydrate binding;P:N-terminal protein myristoylation, response to wounding;C:unknown;P O.I. C.G. H.G.
12.2 99.3 121.1 At5g49450 835005 AtbZIP1 (Arabidopsis thaliana basic leucine-zipper 1) F:transcription factor activity, protein heterodimerization activity, DNA binding;P:anther dehiscence, regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PMO O.I. C.G. H.G.
12.1 99.3 57.7 At3g17100 820967 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PM O.I. C.G. H.G.
12.0 99.3 159.9 At3g48530 824012 KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1) F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;BOMAFP O.I. C.G. H.G.
12.0 99.3 115.8 At5g57655 835871 xylose isomerase family protein F:xylose isomerase activity;P:carbohydrate metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPMF O.I. C.G. H.G.
12.0 99.3 78.6 At3g13450 820547 DIN4 (DARK INDUCIBLE 4) branched chain alpha-keto acid dehydrogenase E1 beta O.I. C.G. H.G.
12.0 99.3 47.8 At3g04350 819590 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMBO O.I. C.G. H.G.
11.9 99.3 231.2 At5g51970 835272 sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. O.I. C.G. H.G.
11.9 99.3 52.8 At2g40420 818635 amino acid transporter family protein Encodes a putative amino acid transporter. O.I. C.G. H.G.
11.8 99.3 43.1 At4g01330 828117 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
11.6 99.3 85.2 At5g02020 831782 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
11.6 99.3 42.4 At3g06080 819781 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
11.4 99.3 133.9 At1g52190 841649 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMFO O.I. C.G. H.G.
11.4 99.3 73.3 At1g03610 838961 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
11.4 99.3 28.6 At5g49700 835033 DNA-binding protein-related F:unknown;P:biological_process unknown;C:unknown;PMBF O.I. C.G. H.G.
11.4 99.3 15.2 At5g14470 831298 GHMP kinase-related F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM O.I. C.G. H.G.
11.3 99.3 103.4 At4g27260 828834 WES1 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. O.I. C.G. H.G.
11.3 99.3 99.1 At4g37220 829876 stress-responsive protein, putative F:molecular_function unknown;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus, response to stress;C:cellular_component unknown;P O.I. C.G. H.G.
11.3 99.3 67.3 At5g14240 831274 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB O.I. C.G. H.G.
11.3 99.3 30.1 At5g05710 830455 pleckstrin homology (PH) domain-containing protein F:molecular_function unknown;P:unknown;C:cellular_component unknown;MOPFV O.I. C.G. H.G.
11.2 99.2 71.0 At1g26665 839207 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
11.1 99.2 144.8 At5g03240 831899 UBQ3 (POLYUBIQUITIN 3) encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments. O.I. C.G. H.G.
11.1 99.2 103.9 At4g18710 827605 BIN2 (BRASSINOSTEROID-INSENSITIVE 2) ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. O.I. C.G. H.G.
11.0 99.2 47.0 At1g23870 838998 ATTPS9 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. O.I. C.G. H.G.
11.0 99.2 28.4 At1g28260 839720 - F:unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
11.0 99.2 22.8 At1g69160 843247 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMV O.I. C.G. H.G.
10.7 99.2 229.8 At3g13750 820584 BGAL1 (Beta galactosidase 1) beta-galactosidase, glycosyl hydrolase family 35 O.I. C.G. H.G.
10.7 99.2 34.6 At5g44250 834448 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
10.6 99.2 106.2 At2g18280 816344 AtTLP2 (TUBBY LIKE PROTEIN 2) Member of TLP family O.I. C.G. H.G.
10.6 99.2 63.9 At4g25910 828697 NFU3 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast. O.I. C.G. H.G.
10.4 99.2 86.3 At4g38470 830003 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation, metabolic process;C:cytosol;MPOBFVA O.I. C.G. H.G.
10.4 99.2 29.6 At3g57800 825530 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFB O.I. C.G. H.G.
10.3 99.2 45.0 At1g33050 840200 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFP O.I. C.G. H.G.
10.3 99.2 29.0 At3g09880 820146 ATB' BETA Encodes B' regulatory subunit of PP2A (AtB'beta). O.I. C.G. H.G.
10.2 99.2 52.4 At1g08630 837385 THA1 (Threonine Aldolase 1) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings. O.I. C.G. H.G.
10.1 99.2 129.1 At5g63190 836440 MA3 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
10.1 99.2 18.4 At4g24050 828505 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
10.1 99.2 12.5 At5g07000 830591 ST2B (SULFOTRANSFERASE 2B) Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates. O.I. C.G. H.G.
10.0 99.2 54.5 At2g42890 818890 AML2 (ARABIDOPSIS-MEI2-LIKE 2) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices. O.I. C.G. H.G.
10.0 99.2 44.6 At2g47700 819383 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOF O.I. C.G. H.G.
9.8 99.1 167.1 At1g80440 844383 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFA O.I. C.G. H.G.
9.8 99.1 43.5 At1g19540 838541 isoflavone reductase, putative F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:cellular_component unknown;BPFOVMA O.I. C.G. H.G.
9.7 99.1 178.0 At1g62510 842548 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
63.0	99.8	114.9	At5g01740	831686	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
56.8	99.8	50.5	At2g42870	818887	PAR1 (PHY RAPIDLY REGULATED 1)	Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510).	O.I.	C.G.	H.G.
43.0	99.8	89.1	At5g02540	831913	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
39.8	99.8	159.4	At3g45300	823668	IVD (ISOVALERYL-COA-DEHYDROGENASE)	Encodes isovaleryl-coenzyme a dehydrogenase.	O.I.	C.G.	H.G.
36.9	99.7	80.1	At1g02340	839300	HFR1 (LONG HYPOCOTYL IN FAR-RED)	Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1.	O.I.	C.G.	H.G.
33.5	99.7	42.0	At1g34760	840380	GRF11 (GENERAL REGULATORY FACTOR 11)	Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.	O.I.	C.G.	H.G.
32.2	99.7	90.7	At1g21400	838739	2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative	F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
28.3	99.7	175.0	At1g03090	838362	MCCA	MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.	O.I.	C.G.	H.G.
25.7	99.7	361.9	At3g47340	823888	ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)	encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.	O.I.	C.G.	H.G.
25.5	99.7	275.3	At2g39570	818542	ACT domain-containing protein	F:amino acid binding;P:metabolic process;C:unknown;POB	O.I.	C.G.	H.G.
23.6	99.6	65.6	At1g54740	841915	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBF	O.I.	C.G.	H.G.
23.2	99.6	80.2	At4g38690	830025	1-phosphatidylinositol phosphodiesterase-related	F:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, N-terminal protein myristoylation, lipid metabolic process;C:cellular_component unknown;BFMPO	O.I.	C.G.	H.G.
22.9	99.6	229.6	At1g19530	838540	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.7	99.6	176.8	At5g02840	831766	LCL1 (LHY/CCA1-like 1)	CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis.	O.I.	C.G.	H.G.
21.3	99.6	140.4	At3g06850	819869	BCE2	dihydrolipoamide branched chain acyltransferase	O.I.	C.G.	H.G.
20.4	99.6	53.2	At1g22740	838880	RABG3B	GTP-binding protein Rab7	O.I.	C.G.	H.G.
19.7	99.6	69.6	At3g05900	819759	neurofilament protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
18.7	99.5	18.6	At4g12690	826881	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.6	99.5	70.8	At5g01240	831866	amino acid permease, putative	F:transporter activity;P:amino acid transport;C:membrane;PFMO	O.I.	C.G.	H.G.
18.4	99.5	366.0	At2g05540	815103	glycine-rich protein	F:unknown;P:unknown;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
18.2	99.5	68.6	At1g77210	844057	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
18.0	99.5	102.1	At5g07010	830592	ST2A (SULFOTRANSFERASE 2A)	Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).	O.I.	C.G.	H.G.
18.0	99.5	64.6	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
18.0	99.5	53.6	At5g62280	836349	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.6	99.5	83.3	At4g28040	828919	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM	O.I.	C.G.	H.G.
17.4	99.5	258.6	At4g14130	827051	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	xyloglucan endotransglycosylase-related protein (XTR7)	O.I.	C.G.	H.G.
17.2	99.5	45.6	At4g16780	827384	ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)	Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.	O.I.	C.G.	H.G.
16.6	99.5	62.3	At3g49790	824141	ATP binding	F:ATP binding;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
16.4	99.5	8.4	At5g04190	830297	PKS4 (phytochrome kinase substrate 4)	Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.	O.I.	C.G.	H.G.
16.3	99.5	60.2	At2g15695	816063	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
16.2	99.5	360.5	At5g49360	834996	BXL1 (BETA-XYLOSIDASE 1)	Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.	O.I.	C.G.	H.G.
16.2	99.5	32.6	At4g32280	829361	IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29)	Auxin inducible protein.	O.I.	C.G.	H.G.
15.7	99.5	88.6	At5g56100	835709	glycine-rich protein / oleosin	F:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PB	O.I.	C.G.	H.G.
15.7	99.5	56.3	At1g76460	843979	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA	O.I.	C.G.	H.G.
15.4	99.5	199.9	At1g58030	842170	CAT2 (CATIONIC AMINO ACID TRANSPORTER 2)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.	O.I.	C.G.	H.G.
15.2	99.4	32.5	At4g23870	828486	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.0	99.4	135.9	At1g06570	837168	PDS1 (PHYTOENE DESATURATION 1)	Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.	O.I.	C.G.	H.G.
15.0	99.4	130.5	At5g21170	832243	5'-AMP-activated protein kinase beta-2 subunit, putative	F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
14.9	99.4	269.7	At5g56870	835789	BGAL4 (beta-galactosidase 4)	F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA	O.I.	C.G.	H.G.
14.9	99.4	202.9	At3g62650	825439	unknown protein	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
14.5	99.4	459.9	At4g35770	829730	SEN1 (SENESCENCE 1)	Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.	O.I.	C.G.	H.G.
14.4	99.4	132.6	At1g09570	837483	PHYA (PHYTOCHROME A)	Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.	O.I.	C.G.	H.G.
14.2	99.4	211.0	At1g12780	837834	UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1)	Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.	O.I.	C.G.	H.G.
14.0	99.4	116.5	At4g34030	829549	MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)	MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.	O.I.	C.G.	H.G.
13.9	99.4	93.1	At5g16340	831495	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
13.9	99.4	73.6	At1g14280	837989	PKS2 (PHYTOCHROME KINASE SUBSTRATE 2)	Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism.	O.I.	C.G.	H.G.
13.6	99.4	120.6	At1g10070	837543	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2)	Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.	O.I.	C.G.	H.G.
13.4	99.4	214.9	At5g16110	831468	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
13.2	99.4	27.9	At5g44260	834449	zinc finger (CCCH-type) family protein	F:transcription factor activity, nucleic acid binding;P:unknown;C:unknown;MOPFV	O.I.	C.G.	H.G.
13.1	99.4	64.1	At2g45620	819170	nucleotidyltransferase family protein	F:nucleotidyltransferase activity;P:biological_process unknown;C:cellular_component unknown;MOFPB	O.I.	C.G.	H.G.
13.1	99.4	44.9	At3g19860	821523	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFBV	O.I.	C.G.	H.G.
13.0	99.4	204.6	At5g05690	830453	CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)	Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.	O.I.	C.G.	H.G.
12.7	99.3	92.0	At4g17730	827494	SYP23 (SYNTAXIN OF PLANTS 23)	member of SYP2 Gene Family	O.I.	C.G.	H.G.
12.7	99.3	56.2	At2g47930	819405	AGP26 (ARABINOGALACTAN PROTEIN 26)	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OPMVBFA	O.I.	C.G.	H.G.
12.6	99.3	24.2	At3g15070	820736	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVB	O.I.	C.G.	H.G.
12.4	99.3	83.9	At5g60850	836206	OBP4	Encodes a zinc finger protein.	O.I.	C.G.	H.G.
12.4	99.3	32.4	At5g66160	836748	JR700	Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.	O.I.	C.G.	H.G.
12.3	99.3	141.6	At3g61060	825278	AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)	F:carbohydrate binding;P:N-terminal protein myristoylation, response to wounding;C:unknown;P	O.I.	C.G.	H.G.
12.2	99.3	121.1	At5g49450	835005	AtbZIP1 (Arabidopsis thaliana basic leucine-zipper 1)	F:transcription factor activity, protein heterodimerization activity, DNA binding;P:anther dehiscence, regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PMO	O.I.	C.G.	H.G.
12.1	99.3	57.7	At3g17100	820967	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PM	O.I.	C.G.	H.G.
12.0	99.3	159.9	At3g48530	824012	KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1)	F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;BOMAFP	O.I.	C.G.	H.G.
12.0	99.3	115.8	At5g57655	835871	xylose isomerase family protein	F:xylose isomerase activity;P:carbohydrate metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPMF	O.I.	C.G.	H.G.
12.0	99.3	78.6	At3g13450	820547	DIN4 (DARK INDUCIBLE 4)	branched chain alpha-keto acid dehydrogenase E1 beta	O.I.	C.G.	H.G.
12.0	99.3	47.8	At3g04350	819590	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMBO	O.I.	C.G.	H.G.
11.9	99.3	231.2	At5g51970	835272	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.	O.I.	C.G.	H.G.
11.9	99.3	52.8	At2g40420	818635	amino acid transporter family protein	Encodes a putative amino acid transporter.	O.I.	C.G.	H.G.
11.8	99.3	43.1	At4g01330	828117	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
11.6	99.3	85.2	At5g02020	831782	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
11.6	99.3	42.4	At3g06080	819781	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.4	99.3	133.9	At1g52190	841649	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PBMFO	O.I.	C.G.	H.G.
11.4	99.3	73.3	At1g03610	838961	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
11.4	99.3	28.6	At5g49700	835033	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:unknown;PMBF	O.I.	C.G.	H.G.
11.4	99.3	15.2	At5g14470	831298	GHMP kinase-related	F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM	O.I.	C.G.	H.G.
11.3	99.3	103.4	At4g27260	828834	WES1	encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.	O.I.	C.G.	H.G.
11.3	99.3	99.1	At4g37220	829876	stress-responsive protein, putative	F:molecular_function unknown;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus, response to stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.3	99.3	67.3	At5g14240	831274	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPB	O.I.	C.G.	H.G.
11.3	99.3	30.1	At5g05710	830455	pleckstrin homology (PH) domain-containing protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;MOPFV	O.I.	C.G.	H.G.
11.2	99.2	71.0	At1g26665	839207	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
11.1	99.2	144.8	At5g03240	831899	UBQ3 (POLYUBIQUITIN 3)	encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.	O.I.	C.G.	H.G.
11.1	99.2	103.9	At4g18710	827605	BIN2 (BRASSINOSTEROID-INSENSITIVE 2)	ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus.	O.I.	C.G.	H.G.
11.0	99.2	47.0	At1g23870	838998	ATTPS9	Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.	O.I.	C.G.	H.G.
11.0	99.2	28.4	At1g28260	839720	-	F:unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
11.0	99.2	22.8	At1g69160	843247	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMV	O.I.	C.G.	H.G.
10.7	99.2	229.8	At3g13750	820584	BGAL1 (Beta galactosidase 1)	beta-galactosidase, glycosyl hydrolase family 35	O.I.	C.G.	H.G.
10.7	99.2	34.6	At5g44250	834448	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
10.6	99.2	106.2	At2g18280	816344	AtTLP2 (TUBBY LIKE PROTEIN 2)	Member of TLP family	O.I.	C.G.	H.G.
10.6	99.2	63.9	At4g25910	828697	NFU3	Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast.	O.I.	C.G.	H.G.
10.4	99.2	86.3	At4g38470	830003	protein kinase family protein	F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation, metabolic process;C:cytosol;MPOBFVA	O.I.	C.G.	H.G.
10.4	99.2	29.6	At3g57800	825530	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFB	O.I.	C.G.	H.G.
10.3	99.2	45.0	At1g33050	840200	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFP	O.I.	C.G.	H.G.
10.3	99.2	29.0	At3g09880	820146	ATB' BETA	Encodes B' regulatory subunit of PP2A (AtB'beta).	O.I.	C.G.	H.G.
10.2	99.2	52.4	At1g08630	837385	THA1 (Threonine Aldolase 1)	Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.	O.I.	C.G.	H.G.
10.1	99.2	129.1	At5g63190	836440	MA3 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
10.1	99.2	18.4	At4g24050	828505	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
10.1	99.2	12.5	At5g07000	830591	ST2B (SULFOTRANSFERASE 2B)	Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates.	O.I.	C.G.	H.G.
10.0	99.2	54.5	At2g42890	818890	AML2 (ARABIDOPSIS-MEI2-LIKE 2)	A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.	O.I.	C.G.	H.G.
10.0	99.2	44.6	At2g47700	819383	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOF	O.I.	C.G.	H.G.
9.8	99.1	167.1	At1g80440	844383	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFA	O.I.	C.G.	H.G.
9.8	99.1	43.5	At1g19540	838541	isoflavone reductase, putative	F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:cellular_component unknown;BPFOVMA	O.I.	C.G.	H.G.
9.7	99.1	178.0	At1g62510	842548	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-1299-raw-cel-1519903415
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1299-raw-cel-1519903415 GSE experiment -

GSM ID -

Assay name E-MEXP-1299-raw-cel-1519903415

GSE experiment -