CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1246-raw-cel-1504120231

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
273.6 100.0 261.2 At1g72290 843561 trypsin and protease inhibitor family protein / Kunitz family protein F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
177.4 100.0 104.6 At2g12480 815721 serine carboxypeptidase S10 family protein F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
166.7 100.0 97.8 At3g26140 822214 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BFPOA O.I. C.G. H.G.
143.1 99.9 206.5 At5g44630 834491 terpene synthase/cyclase family protein Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries. O.I. C.G. H.G.
118.9 99.9 51.4 At5g23960 832461 TPS21 (TERPENE SYNTHASE 21) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. O.I. C.G. H.G.
117.3 99.9 118.1 At3g12000 820374 S-locus related protein SLR1, putative (S1) F:sugar binding;P:recognition of pollen;C:endomembrane system;PO O.I. C.G. H.G.
111.1 99.9 231.5 At1g44970 841062 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
109.4 99.9 100.0 At1g25330 839117 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF O.I. C.G. H.G.
99.0 99.9 23.2 At5g20330 832155 BETAG4 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PO O.I. C.G. H.G.
90.6 99.9 173.4 At5g44620 834490 CYP706A3 member of CYP706A O.I. C.G. H.G.
86.5 99.9 332.2 At5g24420 832513 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
84.5 99.9 82.9 At1g28710 839771 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
83.9 99.9 66.8 At1g30795 839961 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV O.I. C.G. H.G.
83.2 99.9 134.7 At2g34870 818052 MEE26 (maternal effect embryo arrest 26) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MPOVFBA O.I. C.G. H.G.
79.9 99.9 36.7 At5g58400 835953 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
79.4 99.9 25.9 At5g17540 831620 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
77.4 99.9 100.3 At2g21650 816703 MEE3 (MATERNAL EFFECT EMBRYO ARREST 3) F:transcription factor activity, DNA binding;P:embryonic development ending in seed dormancy, regulation of transcription, DNA-dependent;C:unknown;PMO O.I. C.G. H.G.
73.9 99.9 233.9 At2g02850 814816 ARPN (PLANTACYANIN) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil. O.I. C.G. H.G.
65.0 99.8 42.4 At5g02190 831845 PCS1 (PROMOTION OF CELL SURVIVAL 1) encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. O.I. C.G. H.G.
64.6 99.8 495.7 At1g72260 843558 THI2.1 (THIONIN 2.1) Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
61.1 99.8 91.0 At5g21150 832241 PAZ domain-containing protein / piwi domain-containing protein F:nucleic acid binding;P:unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
61.1 99.8 87.0 At4g21590 828245 ENDO3 (endonuclease 3) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development. O.I. C.G. H.G.
60.3 99.8 67.0 At4g28680 828986 tyrosine decarboxylase, putative Encodes a stress-induced tyrosine decarboxylase (TyrDC). Recombinant (His)6-TyrDC expressed in E. coli catalyzes the conversion of L-tyrosine to tyramine. Recombinant TyrDC forms tetramers. O.I. C.G. H.G.
60.3 99.8 56.8 At4g21480 828233 carbohydrate transmembrane transporter/ sugar:hydrogen symporter F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAV O.I. C.G. H.G.
55.9 99.8 65.7 At2g27880 817334 AGO5 (ARGONAUTE 5) F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV O.I. C.G. H.G.
54.7 99.8 43.6 At1g27360 839625 squamosa promoter-binding protein-like 11 (SPL11) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
52.0 99.8 32.2 At5g03390 831852 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
51.0 99.8 37.4 At5g23970 832462 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
49.8 99.8 58.0 At3g60160 825186 ATMRP9 member of MRP subfamily O.I. C.G. H.G.
48.8 99.8 80.5 At2g42200 818820 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b. O.I. C.G. H.G.
48.8 99.8 78.7 At4g20320 827780 CTP synthase/ catalytic F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:cellular_component unknown;OBMFAP O.I. C.G. H.G.
48.6 99.8 91.0 At1g54020 841840 myrosinase-associated protein, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM O.I. C.G. H.G.
47.6 99.8 28.9 At1g65445 842856 transferase-related F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
44.6 99.8 93.1 At3g11480 820321 BSMT1 The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. O.I. C.G. H.G.
43.8 99.8 63.9 At1g51460 841571 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV O.I. C.G. H.G.
43.1 99.8 90.8 At5g60910 836212 AGL8 (agamous-like 8) MADS box gene negatively regulated by APETALA1 O.I. C.G. H.G.
42.6 99.8 23.2 At4g00870 827990 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
41.9 99.8 9.3 At3g45940 823737 alpha-xylosidase, putative F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BMFOPAV O.I. C.G. H.G.
40.2 99.8 29.6 At3g50280 824190 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
39.5 99.8 19.9 At1g23420 838950 INO (INNER NO OUTER) Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule. O.I. C.G. H.G.
39.0 99.8 146.6 At1g57750 842150 CYP96A15 (CYTOCHROME P450 96 A1) Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis. O.I. C.G. H.G.
38.9 99.8 45.0 At1g27370 839626 squamosa promoter-binding protein-like 10 (SPL10) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM O.I. C.G. H.G.
36.9 99.7 43.3 At1g03170 839563 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
36.5 99.7 45.1 At1g06520 837163 GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels. O.I. C.G. H.G.
35.9 99.7 50.3 At5g07280 830619 EMS1 (EXCESS MICROSPOROCYTES1) Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ems1 mutants lack the tapetum. Acts as regulator of anther cell differentiation O.I. C.G. H.G.
35.3 99.7 64.1 At3g27810 822401 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
35.0 99.7 27.1 At3g04960 819656 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
32.6 99.7 86.6 At3g06450 819821 anion exchange family protein F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV O.I. C.G. H.G.
32.3 99.7 70.2 At1g65450 842857 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
31.5 99.7 18.4 At4g36770 829830 UDP-glycosyltransferase/ transferase, transferring glycosyl groups F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
31.0 99.7 156.2 At5g09730 830833 BXL3 (beta-xylosidase 3) encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. O.I. C.G. H.G.
30.9 99.7 131.4 At1g52410 841671 TSA1 (TSK-ASSOCIATING PROTEIN 1) Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers. O.I. C.G. H.G.
30.5 99.7 85.0 At4g09960 826586 STK (SEEDSTICK) a MADS box transcription factor expressed in the carpel and ovules O.I. C.G. H.G.
30.3 99.7 23.9 At1g75050 843843 - F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV O.I. C.G. H.G.
29.9 99.7 27.7 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A O.I. C.G. H.G.
29.5 99.7 59.1 At1g02800 839385 ATCEL2 Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia. O.I. C.G. H.G.
29.4 99.7 38.2 At3g17070 820964 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
29.3 99.7 58.3 At4g21630 828250 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM O.I. C.G. H.G.
29.2 99.7 34.5 At1g03710 839427 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
28.6 99.7 18.5 At1g70270 843363 ATP binding / DNA binding F:DNA binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.1 99.7 352.1 At4g12960 826908 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
26.9 99.7 43.6 At1g56210 842074 copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;MPOFBVA O.I. C.G. H.G.
26.7 99.7 41.3 At3g46770 823830 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
26.6 99.7 94.7 At4g12890 826901 gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
26.6 99.7 50.9 At4g26590 828766 OPT5 (OLIGOPEPTIDE TRANSPORTER 5) oligopeptide transporter O.I. C.G. H.G.
26.1 99.7 109.6 At3g02310 821151 SEP2 (SEPALLATA 2) MADS-box protein, binds K domain of AG in vivo O.I. C.G. H.G.
26.1 99.7 19.4 At5g22980 832362 scpl47 (serine carboxypeptidase-like 47) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
25.5 99.7 11.2 At3g13662 820571 - F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
25.4 99.6 68.0 At3g55110 824677 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV O.I. C.G. H.G.
25.4 99.6 40.1 At1g70560 843393 TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1) TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln. O.I. C.G. H.G.
25.3 99.6 26.2 At5g04660 830343 CYP77A4 encodes a protein with cytochrome P450 domain O.I. C.G. H.G.
25.0 99.6 33.7 At4g14695 827120 unknown protein F:unknown;P:biological_process unknown;C:mitochondrion;MFPO O.I. C.G. H.G.
24.9 99.6 15.0 At5g42230 834228 scpl41 (serine carboxypeptidase-like 41) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
24.8 99.6 35.1 At5g62230 836344 ERL1 (ERECTA-LIKE 1) Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. O.I. C.G. H.G.
24.8 99.6 27.9 At4g32710 3770575 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
24.7 99.6 74.6 At4g21900 828279 antiporter/ drug transporter/ transporter F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;MPO O.I. C.G. H.G.
23.8 99.6 24.1 At5g45960 834636 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
23.4 99.6 413.1 At1g48750 841297 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
22.6 99.6 123.6 At4g01080 827902 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
22.6 99.6 75.0 At4g33790 829521 CER4 (ECERIFERUM 4) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. O.I. C.G. H.G.
22.6 99.6 51.6 At5g15800 831436 SEP1 (SEPALLATA1) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. O.I. C.G. H.G.
21.6 99.6 58.5 At5g37300 833704 WSD1 Encodes a bifunctional enzyme, wax ester synthase (WS) and diacylglycerol acyltransferase (DGAT). In vitro assay indicated a ratio of 10.9 between its WS and DGAT activities. Both mutant and in vivo expression/analysis in yeast studies indicated a role in wax biosynthesis. O.I. C.G. H.G.
21.1 99.6 168.6 At2g28470 817395 BGAL8 (beta-galactosidase 8) putative beta-galactosidase (BGAL8 gene) O.I. C.G. H.G.
20.9 99.6 100.6 At3g54820 824647 PIP2 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV O.I. C.G. H.G.
20.9 99.6 63.3 At3g15680 820811 zinc finger (Ran-binding) family protein F:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOFB O.I. C.G. H.G.
20.9 99.6 34.0 At2g41820 818781 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
20.6 99.6 284.6 At1g70370 843373 BURP domain-containing protein / polygalacturonase, putative F:polygalacturonase activity;P:biological_process unknown;C:endomembrane system;OBMPFAV O.I. C.G. H.G.
20.6 99.6 75.1 At2g39330 818518 JAL23 (JACALIN-RELATED LECTIN 23) F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF O.I. C.G. H.G.
20.5 99.6 15.8 At5g23260 832390 TT16 (TRANSPARENT TESTA16) Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. O.I. C.G. H.G.
20.3 99.6 50.9 At5g67110 836846 ALC (ALCATRAZ) encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. O.I. C.G. H.G.
20.1 99.6 37.4 At5g60140 836136 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;BOMFPVA O.I. C.G. H.G.
20.0 99.6 121.2 At4g15440 827215 HPL1 (HYDROPEROXIDE LYASE 1) Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase. O.I. C.G. H.G.
19.9 99.6 21.2 At5g15720 831427 GLIP7 Contains lipase signature motif and GDSL domain. O.I. C.G. H.G.
19.7 99.6 76.0 At3g13510 820553 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB O.I. C.G. H.G.
19.6 99.6 19.9 At4g30130 829136 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMF O.I. C.G. H.G.
19.5 99.6 94.9 At5g26850 832743 - F:unknown;P:biological_process unknown;C:chloroplast;MPFO O.I. C.G. H.G.
19.3 99.6 170.6 At5g53120 835392 SPDS3 (SPERMIDINE SYNTHASE 3) encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. O.I. C.G. H.G.
19.2 99.6 30.4 At1g05450 837046 protease inhibitor/seed storage/lipid transfer protein (LTP)-related Encodes a Protease inhibitor/seed storage/LTP family protein O.I. C.G. H.G.
19.1 99.6 53.3 At1g02190 839541 CER1 protein, putative F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV O.I. C.G. H.G.
19.0 99.5 83.7 At3g20520 821598 SVL3 (SHV3-LIKE 3) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOM O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
273.6	100.0	261.2	At1g72290	843561	trypsin and protease inhibitor family protein / Kunitz family protein	F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
177.4	100.0	104.6	At2g12480	815721	serine carboxypeptidase S10 family protein	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
166.7	100.0	97.8	At3g26140	822214	glycosyl hydrolase family 5 protein / cellulase family protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BFPOA	O.I.	C.G.	H.G.
143.1	99.9	206.5	At5g44630	834491	terpene synthase/cyclase family protein	Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.	O.I.	C.G.	H.G.
118.9	99.9	51.4	At5g23960	832461	TPS21 (TERPENE SYNTHASE 21)	Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.	O.I.	C.G.	H.G.
117.3	99.9	118.1	At3g12000	820374	S-locus related protein SLR1, putative (S1)	F:sugar binding;P:recognition of pollen;C:endomembrane system;PO	O.I.	C.G.	H.G.
111.1	99.9	231.5	At1g44970	841062	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
109.4	99.9	100.0	At1g25330	839117	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF	O.I.	C.G.	H.G.
99.0	99.9	23.2	At5g20330	832155	BETAG4	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PO	O.I.	C.G.	H.G.
90.6	99.9	173.4	At5g44620	834490	CYP706A3	member of CYP706A	O.I.	C.G.	H.G.
86.5	99.9	332.2	At5g24420	832513	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
84.5	99.9	82.9	At1g28710	839771	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
83.9	99.9	66.8	At1g30795	839961	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV	O.I.	C.G.	H.G.
83.2	99.9	134.7	At2g34870	818052	MEE26 (maternal effect embryo arrest 26)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MPOVFBA	O.I.	C.G.	H.G.
79.9	99.9	36.7	At5g58400	835953	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
79.4	99.9	25.9	At5g17540	831620	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
77.4	99.9	100.3	At2g21650	816703	MEE3 (MATERNAL EFFECT EMBRYO ARREST 3)	F:transcription factor activity, DNA binding;P:embryonic development ending in seed dormancy, regulation of transcription, DNA-dependent;C:unknown;PMO	O.I.	C.G.	H.G.
73.9	99.9	233.9	At2g02850	814816	ARPN (PLANTACYANIN)	Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.	O.I.	C.G.	H.G.
65.0	99.8	42.4	At5g02190	831845	PCS1 (PROMOTION OF CELL SURVIVAL 1)	encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.	O.I.	C.G.	H.G.
64.6	99.8	495.7	At1g72260	843558	THI2.1 (THIONIN 2.1)	Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.	O.I.	C.G.	H.G.
61.1	99.8	91.0	At5g21150	832241	PAZ domain-containing protein / piwi domain-containing protein	F:nucleic acid binding;P:unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
61.1	99.8	87.0	At4g21590	828245	ENDO3 (endonuclease 3)	Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.	O.I.	C.G.	H.G.
60.3	99.8	67.0	At4g28680	828986	tyrosine decarboxylase, putative	Encodes a stress-induced tyrosine decarboxylase (TyrDC). Recombinant (His)6-TyrDC expressed in E. coli catalyzes the conversion of L-tyrosine to tyramine. Recombinant TyrDC forms tetramers.	O.I.	C.G.	H.G.
60.3	99.8	56.8	At4g21480	828233	carbohydrate transmembrane transporter/ sugar:hydrogen symporter	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAV	O.I.	C.G.	H.G.
55.9	99.8	65.7	At2g27880	817334	AGO5 (ARGONAUTE 5)	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV	O.I.	C.G.	H.G.
54.7	99.8	43.6	At1g27360	839625	squamosa promoter-binding protein-like 11 (SPL11)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
52.0	99.8	32.2	At5g03390	831852	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
51.0	99.8	37.4	At5g23970	832462	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
49.8	99.8	58.0	At3g60160	825186	ATMRP9	member of MRP subfamily	O.I.	C.G.	H.G.
48.8	99.8	80.5	At2g42200	818820	SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)	Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.	O.I.	C.G.	H.G.
48.8	99.8	78.7	At4g20320	827780	CTP synthase/ catalytic	F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:cellular_component unknown;OBMFAP	O.I.	C.G.	H.G.
48.6	99.8	91.0	At1g54020	841840	myrosinase-associated protein, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM	O.I.	C.G.	H.G.
47.6	99.8	28.9	At1g65445	842856	transferase-related	F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
44.6	99.8	93.1	At3g11480	820321	BSMT1	The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.	O.I.	C.G.	H.G.
43.8	99.8	63.9	At1g51460	841571	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV	O.I.	C.G.	H.G.
43.1	99.8	90.8	At5g60910	836212	AGL8 (agamous-like 8)	MADS box gene negatively regulated by APETALA1	O.I.	C.G.	H.G.
42.6	99.8	23.2	At4g00870	827990	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
41.9	99.8	9.3	At3g45940	823737	alpha-xylosidase, putative	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BMFOPAV	O.I.	C.G.	H.G.
40.2	99.8	29.6	At3g50280	824190	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
39.5	99.8	19.9	At1g23420	838950	INO (INNER NO OUTER)	Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule.	O.I.	C.G.	H.G.
39.0	99.8	146.6	At1g57750	842150	CYP96A15 (CYTOCHROME P450 96 A1)	Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.	O.I.	C.G.	H.G.
38.9	99.8	45.0	At1g27370	839626	squamosa promoter-binding protein-like 10 (SPL10)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PM	O.I.	C.G.	H.G.
36.9	99.7	43.3	At1g03170	839563	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
36.5	99.7	45.1	At1g06520	837163	GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1)	Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.	O.I.	C.G.	H.G.
35.9	99.7	50.3	At5g07280	830619	EMS1 (EXCESS MICROSPOROCYTES1)	Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. ems1 mutants lack the tapetum. Acts as regulator of anther cell differentiation	O.I.	C.G.	H.G.
35.3	99.7	64.1	At3g27810	822401	ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)	Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
35.0	99.7	27.1	At3g04960	819656	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
32.6	99.7	86.6	At3g06450	819821	anion exchange family protein	F:anion exchanger activity;P:anion transport;C:plasma membrane;MFPOBV	O.I.	C.G.	H.G.
32.3	99.7	70.2	At1g65450	842857	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
31.5	99.7	18.4	At4g36770	829830	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
31.0	99.7	156.2	At5g09730	830833	BXL3 (beta-xylosidase 3)	encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.	O.I.	C.G.	H.G.
30.9	99.7	131.4	At1g52410	841671	TSA1 (TSK-ASSOCIATING PROTEIN 1)	Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers.	O.I.	C.G.	H.G.
30.5	99.7	85.0	At4g09960	826586	STK (SEEDSTICK)	a MADS box transcription factor expressed in the carpel and ovules	O.I.	C.G.	H.G.
30.3	99.7	23.9	At1g75050	843843	-	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV	O.I.	C.G.	H.G.
29.9	99.7	27.7	At4g39480	830103	CYP96A9 (CYTOCHROME P450 96 A9)	member of CYP96A	O.I.	C.G.	H.G.
29.5	99.7	59.1	At1g02800	839385	ATCEL2	Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia.	O.I.	C.G.	H.G.
29.4	99.7	38.2	At3g17070	820964	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
29.3	99.7	58.3	At4g21630	828250	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM	O.I.	C.G.	H.G.
29.2	99.7	34.5	At1g03710	839427	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
28.6	99.7	18.5	At1g70270	843363	ATP binding / DNA binding	F:DNA binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.1	99.7	352.1	At4g12960	826908	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
26.9	99.7	43.6	At1g56210	842074	copper chaperone (CCH)-related	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;MPOFBVA	O.I.	C.G.	H.G.
26.7	99.7	41.3	At3g46770	823830	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.6	99.7	94.7	At4g12890	826901	gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
26.6	99.7	50.9	At4g26590	828766	OPT5 (OLIGOPEPTIDE TRANSPORTER 5)	oligopeptide transporter	O.I.	C.G.	H.G.
26.1	99.7	109.6	At3g02310	821151	SEP2 (SEPALLATA 2)	MADS-box protein, binds K domain of AG in vivo	O.I.	C.G.	H.G.
26.1	99.7	19.4	At5g22980	832362	scpl47 (serine carboxypeptidase-like 47)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
25.5	99.7	11.2	At3g13662	820571	-	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
25.4	99.6	68.0	At3g55110	824677	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
25.4	99.6	40.1	At1g70560	843393	TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1)	TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.	O.I.	C.G.	H.G.
25.3	99.6	26.2	At5g04660	830343	CYP77A4	encodes a protein with cytochrome P450 domain	O.I.	C.G.	H.G.
25.0	99.6	33.7	At4g14695	827120	unknown protein	F:unknown;P:biological_process unknown;C:mitochondrion;MFPO	O.I.	C.G.	H.G.
24.9	99.6	15.0	At5g42230	834228	scpl41 (serine carboxypeptidase-like 41)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
24.8	99.6	35.1	At5g62230	836344	ERL1 (ERECTA-LIKE 1)	Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development.	O.I.	C.G.	H.G.
24.8	99.6	27.9	At4g32710	3770575	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
24.7	99.6	74.6	At4g21900	828279	antiporter/ drug transporter/ transporter	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;MPO	O.I.	C.G.	H.G.
23.8	99.6	24.1	At5g45960	834636	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
23.4	99.6	413.1	At1g48750	841297	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
22.6	99.6	123.6	At4g01080	827902	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
22.6	99.6	75.0	At4g33790	829521	CER4 (ECERIFERUM 4)	Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.	O.I.	C.G.	H.G.
22.6	99.6	51.6	At5g15800	831436	SEP1 (SEPALLATA1)	Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.	O.I.	C.G.	H.G.
21.6	99.6	58.5	At5g37300	833704	WSD1	Encodes a bifunctional enzyme, wax ester synthase (WS) and diacylglycerol acyltransferase (DGAT). In vitro assay indicated a ratio of 10.9 between its WS and DGAT activities. Both mutant and in vivo expression/analysis in yeast studies indicated a role in wax biosynthesis.	O.I.	C.G.	H.G.
21.1	99.6	168.6	At2g28470	817395	BGAL8 (beta-galactosidase 8)	putative beta-galactosidase (BGAL8 gene)	O.I.	C.G.	H.G.
20.9	99.6	100.6	At3g54820	824647	PIP2	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAV	O.I.	C.G.	H.G.
20.9	99.6	63.3	At3g15680	820811	zinc finger (Ran-binding) family protein	F:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOFB	O.I.	C.G.	H.G.
20.9	99.6	34.0	At2g41820	818781	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
20.6	99.6	284.6	At1g70370	843373	BURP domain-containing protein / polygalacturonase, putative	F:polygalacturonase activity;P:biological_process unknown;C:endomembrane system;OBMPFAV	O.I.	C.G.	H.G.
20.6	99.6	75.1	At2g39330	818518	JAL23 (JACALIN-RELATED LECTIN 23)	F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF	O.I.	C.G.	H.G.
20.5	99.6	15.8	At5g23260	832390	TT16 (TRANSPARENT TESTA16)	Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule.	O.I.	C.G.	H.G.
20.3	99.6	50.9	At5g67110	836846	ALC (ALCATRAZ)	encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce.	O.I.	C.G.	H.G.
20.1	99.6	37.4	At5g60140	836136	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;BOMFPVA	O.I.	C.G.	H.G.
20.0	99.6	121.2	At4g15440	827215	HPL1 (HYDROPEROXIDE LYASE 1)	Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase.	O.I.	C.G.	H.G.
19.9	99.6	21.2	At5g15720	831427	GLIP7	Contains lipase signature motif and GDSL domain.	O.I.	C.G.	H.G.
19.7	99.6	76.0	At3g13510	820553	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	O.I.	C.G.	H.G.
19.6	99.6	19.9	At4g30130	829136	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
19.5	99.6	94.9	At5g26850	832743	-	F:unknown;P:biological_process unknown;C:chloroplast;MPFO	O.I.	C.G.	H.G.
19.3	99.6	170.6	At5g53120	835392	SPDS3 (SPERMIDINE SYNTHASE 3)	encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.	O.I.	C.G.	H.G.
19.2	99.6	30.4	At1g05450	837046	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	Encodes a Protease inhibitor/seed storage/LTP family protein	O.I.	C.G.	H.G.
19.1	99.6	53.3	At1g02190	839541	CER1 protein, putative	F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV	O.I.	C.G.	H.G.
19.0	99.5	83.7	At3g20520	821598	SVL3 (SHV3-LIKE 3)	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOM	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-1246-raw-cel-1504120231
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1246-raw-cel-1504120231 GSE experiment -

GSM ID -

Assay name E-MEXP-1246-raw-cel-1504120231

GSE experiment -