Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1138-raw-cel-1432773258
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
842.5100.0115.1At3g28770822509unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOBFPVAO.I.C.G.H.G.
822.6100.0206.9At5g39310833927ATEXPA24 (ARABIDOPSIS THALIANA EXPANSIN A24)member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
772.9100.0238.7At4g15980827282pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:apoplast, plant-type cell wall;BMOPFAVO.I.C.G.H.G.
518.9100.0322.4At4g28000828913ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAVO.I.C.G.H.G.
501.1100.0327.5At4g18395827569unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
481.7100.098.9At5g01690830460ATCHX27member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
449.7100.035.6At2g30240817574ATCHX13Encodes a plasma membrane localized potassium transporter.O.I.C.G.H.G.
439.1100.043.9At5g37060833677ATCHX24member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
415.2100.096.5At5g39870833984unknown proteinF:unknown;P:unknown;C:endomembrane system;POBMAO.I.C.G.H.G.
407.4100.059.7At1g79250844265AGC1.7 (AGC KINASE 1.7)F:kinase activity;P:pollen tube growth, unidimensional cell growth;C:unknown;MOPFBVAO.I.C.G.H.G.
389.1100.0200.9At3g10460820210self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
377.9100.0492.3At2g19000816417-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
343.3100.0127.0At2g35210818088RPA (ROOT AND POLLEN ARFGAP)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.O.I.C.G.H.G.
337.7100.0103.8At5g20810832204auxin-responsive protein, putative / small auxin up RNA (SAUR_B)F:calmodulin binding;P:response to auxin stimulus;C:peroxisome;POO.I.C.G.H.G.
329.1100.0245.2At4g00350827306MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
325.5100.069.6At1g23540838963protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOBFPVAO.I.C.G.H.G.
314.7100.037.6At5g60260836148unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
313.9100.0108.6At2g41210818720PIP5K5 (PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5)Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.O.I.C.G.H.G.
313.4100.0174.6At1g24620839076polcalcin, putative / calcium-binding pollen allergen, putativeF:calcium ion binding;P:response to cold;C:nucleus;MFPOBVO.I.C.G.H.G.
308.7100.0111.0At4g27110828819COBL11 (COBRA-LIKE PROTEIN 11 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
307.0100.090.0At4g32630829398ARF GTPase activator/ zinc ion bindingF:ARF GTPase activator activity, zinc ion binding;P:regulation of ARF GTPase activity;C:cellular_component unknown;MOFPBO.I.C.G.H.G.
306.1100.0296.8At5g03690831759fructose-bisphosphate aldolase, putativeF:fructose-bisphosphate aldolase activity, catalytic activity;P:pentose-phosphate shunt;C:unknown;OMBPFO.I.C.G.H.G.
305.1100.037.0At1g68090843137ANN5Encodes a calcium-binding protein annexin (AnnAt5).O.I.C.G.H.G.
296.9100.058.6At5g10090830873tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAO.I.C.G.H.G.
293.1100.0348.5At5g27980832868seed maturation family proteinF:molecular_function unknown;P:multicellular organismal development;C:cellular_component unknown;PBMOO.I.C.G.H.G.
286.5100.048.6At5g19610832081sec7 domain-containing proteinF:ARF guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBO.I.C.G.H.G.
280.9100.0128.5At5g36260833623aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOO.I.C.G.H.G.
276.7100.0453.6At1g67290843049glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOMO.I.C.G.H.G.
265.0100.0157.5At3g46520823805ACT12 (ACTIN-12)Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development.O.I.C.G.H.G.
251.5100.063.0At3g42880823335leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
250.7100.0415.0At3g28780822510unknown proteinF:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVAO.I.C.G.H.G.
248.7100.049.3At1g51915841619cryptdin protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
241.4100.094.6At5g42340834240binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;MPOFBVO.I.C.G.H.G.
236.6100.082.3At2g48150819427ATGPX4 (GLUTATHIONE PEROXIDASE 4)Encodes glutathione peroxidase.O.I.C.G.H.G.
230.9100.072.2At5g02430831780WD-40 repeat family proteinF:signal transducer activity;P:signal transduction;C:heterotrimeric G-protein complex;MFBOPAVO.I.C.G.H.G.
224.5100.062.0At2g19010816418GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
220.9100.056.4At2g03060814835DNA binding / transcription factorEncodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.O.I.C.G.H.G.
220.4100.0448.7At5g07420830633pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
219.6100.040.9At1g67540843075unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
218.9100.094.1At1g13890837948SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.O.I.C.G.H.G.
213.5100.055.7At4g13450826977universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PO.I.C.G.H.G.
213.1100.0231.3At3g61230825295LIM domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
206.8100.0365.7At2g19770816496PRF5 (PROFILIN5)Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes.O.I.C.G.H.G.
195.2100.096.0At2g46300819238-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO.I.C.G.H.G.
192.0100.060.1At2g13620815847ATCHX15member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
185.9100.063.3At3g56960824863PIP5K4 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4)Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.O.I.C.G.H.G.
182.1100.080.5At5g57320835837villin, putativeF:actin binding;P:cytoskeleton organization;C:cellular_component unknown;MOPFBO.I.C.G.H.G.
182.0100.0324.9At2g46860819299AtPPa3 (Arabidopsis thaliana pyrophosphorylase 3)Encodes a protein that might have inorganic pyrophosphatase activity.O.I.C.G.H.G.
181.8100.083.0At3g12690820450AGC1.5 (AGC KINASE 1.5)Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes.O.I.C.G.H.G.
180.1100.023.7At3g52080824371chx28 (cation/hydrogen exchanger 28)encodes a cation:proton exchanger expressed in pollenO.I.C.G.H.G.
179.6100.057.9At1g07330837244unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBAO.I.C.G.H.G.
179.1100.0280.5At5g59370836056ACT4 (ACTIN 4)Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen.O.I.C.G.H.G.
179.1100.071.4At3g46750823828unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
178.0100.097.6At5g14670831319ATARFA1B (ADP-ribosylation factor A1B)A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.O.I.C.G.H.G.
177.7100.079.0At3g20200821564protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
174.9100.059.9At5g41780834183myosin heavy chain-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPAVO.I.C.G.H.G.
172.6100.031.0At2g28440817392proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MBOFPVAO.I.C.G.H.G.
171.8100.025.5At4g31230829250protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
169.0100.054.9At1g63930842696unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMFOO.I.C.G.H.G.
162.599.940.0At1g75160843853unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
162.199.9367.0At2g16730816174BGAL13putative beta-galactosidase (BGAL13 gene)O.I.C.G.H.G.
161.999.9136.3At1g79910844330unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBO.I.C.G.H.G.
161.799.9322.6At3g03430821255polcalcin, putative / calcium-binding pollen allergen, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.C.G.H.G.
159.699.9358.3At1g13970837957unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;POFMO.I.C.G.H.G.
158.899.9150.7At4g00110828145GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.O.I.C.G.H.G.
155.699.994.3At1g31750840062proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
155.499.966.7At5g05070830389zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPO.I.C.G.H.G.
149.599.932.9At2g20470816567kinaseF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MOPFBVAO.I.C.G.H.G.
148.399.929.7At3g23270821906regulator of chromosome condensation (RCC1) family proteinF:chromatin binding, phosphoinositide binding, Ran GTPase binding;P:signal transduction;C:cellular_component unknown;MOPBFAVO.I.C.G.H.G.
148.299.937.1At5g10500830914kinase interacting family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVO.I.C.G.H.G.
148.199.9174.2At3g01250821184unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPO.I.C.G.H.G.
147.999.935.2At1g11990837751unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
146.799.9138.1At3g24720--O.I.C.G.H.G.
144.599.993.6At2g20440816563RabGAP/TBC domain-containing proteinF:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular;MFOPO.I.C.G.H.G.
144.199.9298.9At4g29340829055PRF4 (PROFILIN 4)Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining.O.I.C.G.H.G.
143.499.931.7At2g18080816320EDA2 (embryo sac development arrest 2)F:serine-type peptidase activity;P:proteolysis, megagametogenesis;C:endomembrane system;MOFPBO.I.C.G.H.G.
142.999.955.3At2g33670817932MLO5 (MILDEW RESISTANCE LOCUS O 5)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).O.I.C.G.H.G.
141.099.9115.9At1g63060842609unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
139.499.9268.7At3g62640825438unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
138.299.955.0At1g09600837487protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
137.099.934.1At4g30770829200unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
136.199.9178.9At3g54240824591hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BPOFAMO.I.C.G.H.G.
136.199.983.4At5g13990831247ATEXO70C2 (exocyst subunit EXO70 family protein C2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
134.299.931.4At1g16380838208ATCHX1member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
133.999.9114.7At3g24530822048AAA-type ATPase family protein / ankyrin repeat family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:chloroplast;MOBFPVAO.I.C.G.H.G.
133.499.9369.2At2g02720814801pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
132.899.960.3At4g18790827613NRAMP5member of Nramp2 familyO.I.C.G.H.G.
132.499.938.3At3g22650821836CEG (CEGENDUO)F:molecular_function unknown;P:response to auxin stimulus, lateral root formation;C:cellular_component unknown;POO.I.C.G.H.G.
131.599.9198.0At4g25590828664ADF7 (actin depolymerizing factor 7)F:actin binding;P:biological_process unknown;C:intracellular;MPOFO.I.C.G.H.G.
131.499.9252.3At5g09550830814RAB GDP-dissociation inhibitorF:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
130.799.9233.2At1g03050839416epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:N-terminal protein myristoylation, clathrin coat assembly;C:clathrin coat;MOPFBVAO.I.C.G.H.G.
130.099.9135.7At1g64630842771WNK10 (WITH NO LYSINE KINASE 10)F:transcription factor activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
129.699.9171.8At1g52580841690ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFAO.I.C.G.H.G.
129.699.950.8At5g60740836195ATPase, coupled to transmembrane movement of substancesF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:endomembrane system, membrane;BOMFAPVO.I.C.G.H.G.
129.299.9373.8At2g02140814745LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
129.199.9331.2At4g11760826782LCR17 (Low-molecular-weight cysteine-rich 17)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.O.I.C.G.H.G.
128.799.953.9At3g07960819987phosphatidylinositol-4-phosphate 5-kinase family proteinF:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:cellular_component unknown;OMBPFO.I.C.G.H.G.
128.799.937.2At1g19780838566ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8)member of Cyclic nucleotide gated channel familyO.I.C.G.H.G.
125.799.977.1At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
125.699.9618.8At5g38760833867unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFO.I.C.G.H.G.



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