CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1138-raw-cel-1432773130

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
249.9 100.0 35.6 At2g34440 818007 AGL29 (AGAMOUS-LIKE 29) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOB O.I. C.G. H.G.
224.5 100.0 42.1 At3g27650 822387 LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
154.1 99.9 62.9 At3g05820 819751 beta-fructofuranosidase/ catalytic F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB O.I. C.G. H.G.
154.0 99.9 144.9 At5g42490 834256 kinesin motor family protein F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVA O.I. C.G. H.G.
152.5 99.9 114.6 At1g79860 844325 ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. O.I. C.G. H.G.
152.2 99.9 261.4 At2g07040 815274 PRK2A Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. O.I. C.G. H.G.
151.2 99.9 110.1 At2g25600 817099 SPIK (Shaker Pollen Inward K+ channel) mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) family O.I. C.G. H.G.
149.6 99.9 264.5 At5g20390 832161 beta-1,3-glucanase, putative F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POB O.I. C.G. H.G.
149.3 99.9 408.0 At3g25165 822108 RALFL25 (ralf-like 25) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. O.I. C.G. H.G.
147.1 99.9 140.3 At4g16745 827378 exostosin family protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOBF O.I. C.G. H.G.
146.5 99.9 126.6 At2g28180 817364 ATCHX8 member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
144.9 99.9 209.2 At3g56600 824827 inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor F:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:unknown;PMOFB O.I. C.G. H.G.
144.7 99.9 312.7 At3g09530 820110 ATEXO70H3 (exocyst subunit EXO70 family protein H3) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
144.3 99.9 338.0 At1g68110 843139 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFO O.I. C.G. H.G.
142.6 99.9 247.4 At2g33100 817872 ATCSLD1 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
141.6 99.9 295.8 At1g23350 838944 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
140.2 99.9 351.0 At1g04540 839498 C2 domain-containing protein F:unknown;P:biological_process unknown;C:membrane;PMOFB O.I. C.G. H.G.
139.3 99.9 76.2 At1g10620 837605 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPBFVA O.I. C.G. H.G.
138.9 99.9 314.8 At2g05850 815137 scpl38 (serine carboxypeptidase-like 38) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
138.5 99.9 86.1 At1g50610 841483 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVA O.I. C.G. H.G.
137.2 99.9 325.9 At3g19020 821435 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
137.0 99.9 238.7 At1g03050 839416 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:N-terminal protein myristoylation, clathrin coat assembly;C:clathrin coat;MOPFBVA O.I. C.G. H.G.
136.5 99.9 328.6 At2g33420 817906 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
133.9 99.9 189.1 At1g17540 838328 kinase F:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
133.3 99.9 139.1 At4g33850 829527 glycosyl hydrolase family 10 protein Pseudogene of AT4G33850; glycosyl hydrolase family 10 protein O.I. C.G. H.G.
131.7 99.9 337.6 At2g23900 816922 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMA O.I. C.G. H.G.
130.7 99.9 246.0 At4g39110 830066 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
129.8 99.9 159.9 At1g01310 839333 allergen V5/Tpx-1-related family protein F:molecular_function unknown;P:biological_process unknown;C:extracellular region;MPFOB O.I. C.G. H.G.
128.5 99.9 113.1 At2g45310 819139 GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4) UDP-D-glucuronate 4-epimerase O.I. C.G. H.G.
128.1 99.9 444.6 At2g24450 816981 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR) F:molecular_function unknown;P:N-terminal protein myristoylation;C:anchored to membrane;PBMOFVA O.I. C.G. H.G.
128.1 99.9 273.7 At5g56750 835777 Ndr family protein F:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPBO O.I. C.G. H.G.
126.5 99.9 416.8 At3g20220 821566 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
125.9 99.9 247.3 At3g20190 821563 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOFBVA O.I. C.G. H.G.
125.7 99.9 375.9 At5g58170 835929 SVL5 (SHV3-LIKE 5) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF O.I. C.G. H.G.
125.2 99.9 668.0 At1g24520 839067 BCP1 Male fertility gene acting on tapetum and microspore O.I. C.G. H.G.
124.7 99.9 462.5 At3g04700 819628 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
124.6 99.9 191.5 At2g43230 818924 serine/threonine protein kinase, putative F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
124.5 99.9 326.7 At2g31500 817708 CPK24 member of Calcium Dependent Protein Kinase O.I. C.G. H.G.
124.1 99.9 47.4 At3g57140 824881 patatin-related F:GTP binding;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BFOPM O.I. C.G. H.G.
123.2 99.9 218.4 At2g33460 817911 RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis. O.I. C.G. H.G.
123.1 99.9 113.8 At4g33970 829543 protein binding / structural constituent of cell wall F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
122.6 99.9 284.7 At1g58120 842179 unknown protein F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
122.2 99.9 323.5 At1g04470 839512 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB O.I. C.G. H.G.
121.9 99.9 78.5 At4g14810 827137 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
121.2 99.9 464.0 At3g43860 823499 AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
120.8 99.9 277.5 At1g66210 842936 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOMFA O.I. C.G. H.G.
120.8 99.9 223.0 At2g36020 818175 HVA22J (HVA22-LIKE PROTEIN J) F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
120.7 99.9 385.1 At1g01980 839296 ATSEC1A member of Reticuline oxidase-like family O.I. C.G. H.G.
120.3 99.9 378.4 At3g62180 825391 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
120.3 99.9 265.4 At5g12000 831073 kinase F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
120.2 99.9 272.2 At3g02970 821168 EXL6 (EXORDIUM LIKE 6) F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
120.1 99.9 475.4 At5g50030 835067 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
119.8 99.9 378.6 At2g26450 817185 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
119.6 99.9 188.5 At5g27870 832850 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;BMOFPVA O.I. C.G. H.G.
119.3 99.9 98.0 At1g52240 841654 ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily . O.I. C.G. H.G.
119.0 99.9 503.9 At5g48140 834866 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
118.7 99.9 436.4 At3g25170 822109 RALFL26 (ralf-like 26) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. O.I. C.G. H.G.
118.4 99.9 414.5 At3g05930 819762 GLP8 (GERMIN-LIKE PROTEIN 8) germin-like protein (GLP8) O.I. C.G. H.G.
117.9 99.9 341.9 At2g27180 817260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
117.4 99.9 648.1 At5g07430 830634 pectinesterase family protein F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
116.7 99.9 345.9 At1g14420 838004 AT59 F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFO O.I. C.G. H.G.
116.4 99.9 330.0 At1g47270 841130 AtTLP6 (TUBBY LIKE PROTEIN 6) Member of TLP family O.I. C.G. H.G.
116.1 99.9 353.7 At1g64740 842782 TUA1 (ALPHA-1 TUBULIN) alpha-tubulin expressed primarily in stamens and mature pollen O.I. C.G. H.G.
115.4 99.9 71.6 At4g04980 825839 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVA O.I. C.G. H.G.
115.1 99.9 173.3 At4g39610 830115 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB O.I. C.G. H.G.
114.4 99.9 100.8 At2g32460 817807 MYB101 Member of the R2R3 factor gene family. O.I. C.G. H.G.
114.4 99.9 86.8 At2g38500 818432 - F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
114.2 99.9 433.1 At3g05610 819727 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;OBPFMVA O.I. C.G. H.G.
114.2 99.9 361.8 At4g24640 828566 APPB1 Encodes AppB protein (AppB1). O.I. C.G. H.G.
114.0 99.9 367.2 At2g46210 819228 delta-8 sphingolipid desaturase, putative F:oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding;P:fatty acid biosynthetic process, lipid metabolic process;C:unknown;FMOPBVA O.I. C.G. H.G.
113.5 99.9 211.5 At5g64510 836572 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
113.5 99.9 197.0 At3g20530 821599 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
113.3 99.9 195.4 At5g16500 831511 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPBFVA O.I. C.G. H.G.
111.6 99.9 134.5 At1g18990 838480 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOPFBVA O.I. C.G. H.G.
111.1 99.9 387.5 At5g54095 835496 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMFPVA O.I. C.G. H.G.
110.6 99.9 163.8 At5g25340 832606 unknown protein F:molecular_function unknown;P:unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
110.6 99.9 72.2 At2g46300 819238 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM O.I. C.G. H.G.
110.5 99.9 275.0 At3g20580 821605 COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
109.9 99.9 526.1 At3g26110 822209 - F:molecular_function unknown;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
109.5 99.9 226.3 At3g06260 819800 GATL4 (Galacturonosyltransferase-like 4) Encodes a protein with putative galacturonosyltransferase activity. O.I. C.G. H.G.
109.3 99.9 54.1 At4g38230 829980 CPK26 member of Calcium Dependent Protein Kinase O.I. C.G. H.G.
108.9 99.9 481.0 At3g61160 825288 shaggy-related protein kinase beta / ASK-beta (ASK2) F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA O.I. C.G. H.G.
108.9 99.9 372.6 At5g50830 835155 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
108.9 99.9 36.8 At5g09430 830802 hydrolase F:hydrolase activity;P:unknown;C:unknown;BOMPAF O.I. C.G. H.G.
108.7 99.9 241.0 At2g21540 816693 SFH3 (SEC14-LIKE 3) F:phosphatidylinositol transporter activity;P:flower development, transport;C:intracellular;MPFO O.I. C.G. H.G.
108.2 99.9 558.4 At5g26700 832719 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFOAM O.I. C.G. H.G.
107.8 99.9 324.4 At5g58050 835917 SVL4 (SHV3-LIKE 4) F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF O.I. C.G. H.G.
107.6 99.9 294.2 At1g13970 837957 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;POFM O.I. C.G. H.G.
107.2 99.9 418.8 At1g70790 843416 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
107.1 99.9 138.5 At5g12180 831091 CPK17 member of Calcium Dependent Protein Kinase O.I. C.G. H.G.
106.8 99.9 520.4 At1g28270 839721 RALFL4 (ralf-like 4) Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. O.I. C.G. H.G.
106.5 99.9 88.0 At4g39180 830073 SEC14 encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiae O.I. C.G. H.G.
106.2 99.9 250.4 At3g17980 821323 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
105.9 99.9 224.2 At2g26410 817181 Iqd4 (IQ-domain 4) F:calmodulin binding;P:unknown;C:unknown;PMOBVFA O.I. C.G. H.G.
105.5 99.9 138.1 At1g44160 841019 DNAJ chaperone C-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV O.I. C.G. H.G.
104.3 99.9 174.9 At4g01575 828124 serine protease inhibitor, Kazal-type family protein F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
104.2 99.9 126.4 At3g06830 819867 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAM O.I. C.G. H.G.
103.3 99.9 115.9 At3g24720 - - O.I. C.G. H.G.
103.3 99.9 94.8 At3g18810 821414 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;OMBPFVA O.I. C.G. H.G.
103.2 99.9 96.7 At2g24370 816973 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
249.9	100.0	35.6	At2g34440	818007	AGL29 (AGAMOUS-LIKE 29)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOB	O.I.	C.G.	H.G.
224.5	100.0	42.1	At3g27650	822387	LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
154.1	99.9	62.9	At3g05820	819751	beta-fructofuranosidase/ catalytic	F:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPB	O.I.	C.G.	H.G.
154.0	99.9	144.9	At5g42490	834256	kinesin motor family protein	F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVA	O.I.	C.G.	H.G.
152.5	99.9	114.6	At1g79860	844325	ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)	Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.	O.I.	C.G.	H.G.
152.2	99.9	261.4	At2g07040	815274	PRK2A	Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth.	O.I.	C.G.	H.G.
151.2	99.9	110.1	At2g25600	817099	SPIK (Shaker Pollen Inward K+ channel)	mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) family	O.I.	C.G.	H.G.
149.6	99.9	264.5	At5g20390	832161	beta-1,3-glucanase, putative	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POB	O.I.	C.G.	H.G.
149.3	99.9	408.0	At3g25165	822108	RALFL25 (ralf-like 25)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.	O.I.	C.G.	H.G.
147.1	99.9	140.3	At4g16745	827378	exostosin family protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOBF	O.I.	C.G.	H.G.
146.5	99.9	126.6	At2g28180	817364	ATCHX8	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
144.9	99.9	209.2	At3g56600	824827	inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptor	F:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:unknown;PMOFB	O.I.	C.G.	H.G.
144.7	99.9	312.7	At3g09530	820110	ATEXO70H3 (exocyst subunit EXO70 family protein H3)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
144.3	99.9	338.0	At1g68110	843139	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFO	O.I.	C.G.	H.G.
142.6	99.9	247.4	At2g33100	817872	ATCSLD1	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
141.6	99.9	295.8	At1g23350	838944	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
140.2	99.9	351.0	At1g04540	839498	C2 domain-containing protein	F:unknown;P:biological_process unknown;C:membrane;PMOFB	O.I.	C.G.	H.G.
139.3	99.9	76.2	At1g10620	837605	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPBFVA	O.I.	C.G.	H.G.
138.9	99.9	314.8	At2g05850	815137	scpl38 (serine carboxypeptidase-like 38)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
138.5	99.9	86.1	At1g50610	841483	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVA	O.I.	C.G.	H.G.
137.2	99.9	325.9	At3g19020	821435	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
137.0	99.9	238.7	At1g03050	839416	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:N-terminal protein myristoylation, clathrin coat assembly;C:clathrin coat;MOPFBVA	O.I.	C.G.	H.G.
136.5	99.9	328.6	At2g33420	817906	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
133.9	99.9	189.1	At1g17540	838328	kinase	F:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
133.3	99.9	139.1	At4g33850	829527	glycosyl hydrolase family 10 protein	Pseudogene of AT4G33850; glycosyl hydrolase family 10 protein	O.I.	C.G.	H.G.
131.7	99.9	337.6	At2g23900	816922	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMA	O.I.	C.G.	H.G.
130.7	99.9	246.0	At4g39110	830066	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
129.8	99.9	159.9	At1g01310	839333	allergen V5/Tpx-1-related family protein	F:molecular_function unknown;P:biological_process unknown;C:extracellular region;MPFOB	O.I.	C.G.	H.G.
128.5	99.9	113.1	At2g45310	819139	GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4)	UDP-D-glucuronate 4-epimerase	O.I.	C.G.	H.G.
128.1	99.9	444.6	At2g24450	816981	FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)	F:molecular_function unknown;P:N-terminal protein myristoylation;C:anchored to membrane;PBMOFVA	O.I.	C.G.	H.G.
128.1	99.9	273.7	At5g56750	835777	Ndr family protein	F:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPBO	O.I.	C.G.	H.G.
126.5	99.9	416.8	At3g20220	821566	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
125.9	99.9	247.3	At3g20190	821563	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOFBVA	O.I.	C.G.	H.G.
125.7	99.9	375.9	At5g58170	835929	SVL5 (SHV3-LIKE 5)	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF	O.I.	C.G.	H.G.
125.2	99.9	668.0	At1g24520	839067	BCP1	Male fertility gene acting on tapetum and microspore	O.I.	C.G.	H.G.
124.7	99.9	462.5	At3g04700	819628	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
124.6	99.9	191.5	At2g43230	818924	serine/threonine protein kinase, putative	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
124.5	99.9	326.7	At2g31500	817708	CPK24	member of Calcium Dependent Protein Kinase	O.I.	C.G.	H.G.
124.1	99.9	47.4	At3g57140	824881	patatin-related	F:GTP binding;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BFOPM	O.I.	C.G.	H.G.
123.2	99.9	218.4	At2g33460	817911	RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis.	O.I.	C.G.	H.G.
123.1	99.9	113.8	At4g33970	829543	protein binding / structural constituent of cell wall	F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
122.6	99.9	284.7	At1g58120	842179	unknown protein	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
122.2	99.9	323.5	At1g04470	839512	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB	O.I.	C.G.	H.G.
121.9	99.9	78.5	At4g14810	827137	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
121.2	99.9	464.0	At3g43860	823499	AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
120.8	99.9	277.5	At1g66210	842936	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOMFA	O.I.	C.G.	H.G.
120.8	99.9	223.0	At2g36020	818175	HVA22J (HVA22-LIKE PROTEIN J)	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
120.7	99.9	385.1	At1g01980	839296	ATSEC1A	member of Reticuline oxidase-like family	O.I.	C.G.	H.G.
120.3	99.9	378.4	At3g62180	825391	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
120.3	99.9	265.4	At5g12000	831073	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
120.2	99.9	272.2	At3g02970	821168	EXL6 (EXORDIUM LIKE 6)	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
120.1	99.9	475.4	At5g50030	835067	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
119.8	99.9	378.6	At2g26450	817185	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
119.6	99.9	188.5	At5g27870	832850	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;BMOFPVA	O.I.	C.G.	H.G.
119.3	99.9	98.0	At1g52240	841654	ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11)	Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .	O.I.	C.G.	H.G.
119.0	99.9	503.9	At5g48140	834866	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
118.7	99.9	436.4	At3g25170	822109	RALFL26 (ralf-like 26)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.	O.I.	C.G.	H.G.
118.4	99.9	414.5	At3g05930	819762	GLP8 (GERMIN-LIKE PROTEIN 8)	germin-like protein (GLP8)	O.I.	C.G.	H.G.
117.9	99.9	341.9	At2g27180	817260	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
117.4	99.9	648.1	At5g07430	830634	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
116.7	99.9	345.9	At1g14420	838004	AT59	F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFO	O.I.	C.G.	H.G.
116.4	99.9	330.0	At1g47270	841130	AtTLP6 (TUBBY LIKE PROTEIN 6)	Member of TLP family	O.I.	C.G.	H.G.
116.1	99.9	353.7	At1g64740	842782	TUA1 (ALPHA-1 TUBULIN)	alpha-tubulin expressed primarily in stamens and mature pollen	O.I.	C.G.	H.G.
115.4	99.9	71.6	At4g04980	825839	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
115.1	99.9	173.3	At4g39610	830115	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB	O.I.	C.G.	H.G.
114.4	99.9	100.8	At2g32460	817807	MYB101	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
114.4	99.9	86.8	At2g38500	818432	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
114.2	99.9	433.1	At3g05610	819727	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;OBPFMVA	O.I.	C.G.	H.G.
114.2	99.9	361.8	At4g24640	828566	APPB1	Encodes AppB protein (AppB1).	O.I.	C.G.	H.G.
114.0	99.9	367.2	At2g46210	819228	delta-8 sphingolipid desaturase, putative	F:oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, iron ion binding, heme binding;P:fatty acid biosynthetic process, lipid metabolic process;C:unknown;FMOPBVA	O.I.	C.G.	H.G.
113.5	99.9	211.5	At5g64510	836572	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
113.5	99.9	197.0	At3g20530	821599	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
113.3	99.9	195.4	At5g16500	831511	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPBFVA	O.I.	C.G.	H.G.
111.6	99.9	134.5	At1g18990	838480	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOPFBVA	O.I.	C.G.	H.G.
111.1	99.9	387.5	At5g54095	835496	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMFPVA	O.I.	C.G.	H.G.
110.6	99.9	163.8	At5g25340	832606	unknown protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
110.6	99.9	72.2	At2g46300	819238	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM	O.I.	C.G.	H.G.
110.5	99.9	275.0	At3g20580	821605	COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)	F:unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
109.9	99.9	526.1	At3g26110	822209	-	F:molecular_function unknown;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
109.5	99.9	226.3	At3g06260	819800	GATL4 (Galacturonosyltransferase-like 4)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	H.G.
109.3	99.9	54.1	At4g38230	829980	CPK26	member of Calcium Dependent Protein Kinase	O.I.	C.G.	H.G.
108.9	99.9	481.0	At3g61160	825288	shaggy-related protein kinase beta / ASK-beta (ASK2)	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA	O.I.	C.G.	H.G.
108.9	99.9	372.6	At5g50830	835155	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
108.9	99.9	36.8	At5g09430	830802	hydrolase	F:hydrolase activity;P:unknown;C:unknown;BOMPAF	O.I.	C.G.	H.G.
108.7	99.9	241.0	At2g21540	816693	SFH3 (SEC14-LIKE 3)	F:phosphatidylinositol transporter activity;P:flower development, transport;C:intracellular;MPFO	O.I.	C.G.	H.G.
108.2	99.9	558.4	At5g26700	832719	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFOAM	O.I.	C.G.	H.G.
107.8	99.9	324.4	At5g58050	835917	SVL4 (SHV3-LIKE 4)	F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF	O.I.	C.G.	H.G.
107.6	99.9	294.2	At1g13970	837957	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;POFM	O.I.	C.G.	H.G.
107.2	99.9	418.8	At1g70790	843416	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
107.1	99.9	138.5	At5g12180	831091	CPK17	member of Calcium Dependent Protein Kinase	O.I.	C.G.	H.G.
106.8	99.9	520.4	At1g28270	839721	RALFL4 (ralf-like 4)	Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.	O.I.	C.G.	H.G.
106.5	99.9	88.0	At4g39180	830073	SEC14	encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiae	O.I.	C.G.	H.G.
106.2	99.9	250.4	At3g17980	821323	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
105.9	99.9	224.2	At2g26410	817181	Iqd4 (IQ-domain 4)	F:calmodulin binding;P:unknown;C:unknown;PMOBVFA	O.I.	C.G.	H.G.
105.5	99.9	138.1	At1g44160	841019	DNAJ chaperone C-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
104.3	99.9	174.9	At4g01575	828124	serine protease inhibitor, Kazal-type family protein	F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
104.2	99.9	126.4	At3g06830	819867	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAM	O.I.	C.G.	H.G.
103.3	99.9	115.9	At3g24720		-	-	O.I.	C.G.	H.G.
103.3	99.9	94.8	At3g18810	821414	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;OMBPFVA	O.I.	C.G.	H.G.
103.2	99.9	96.7	At2g24370	816973	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	-
Assay name	E-MEXP-1138-raw-cel-1432773130
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1138-raw-cel-1432773130 GSE experiment -

GSM ID -

Assay name E-MEXP-1138-raw-cel-1432773130

GSE experiment -