CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-MEXP-1100-raw-cel-1378752260

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
22.0 99.6 57.4 At1g31690 840056 amine oxidase/ copper ion binding / quinone binding F:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
15.6 99.5 42.0 At1g07050 837216 CONSTANS-like protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF O.I. C.G. H.G.
14.7 99.4 35.2 At1g23205 838929 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
14.6 99.4 129.4 At5g28500 832943 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;BPO O.I. C.G. H.G.
12.9 99.3 50.9 At5g66470 836779 GTP binding / RNA binding F:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPF O.I. C.G. H.G.
11.9 99.3 36.0 At5g20935 832218 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BPO O.I. C.G. H.G.
10.8 99.2 116.3 At1g14345 837996 oxidoreductase F:oxidoreductase activity;P:oxidation reduction;C:chloroplast thylakoid membrane, chloroplast, membrane;OBP O.I. C.G. H.G.
10.6 99.2 29.7 At5g62140 836334 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO O.I. C.G. H.G.
10.6 99.2 28.1 At5g20140 832136 SOUL heme-binding family protein F:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMA O.I. C.G. H.G.
10.6 99.2 24.3 At2g07695 815371 cytochrome c oxidase subunit II, putative F:electron carrier activity, cytochrome-c oxidase activity, copper ion binding, heme binding;P:electron transport chain, respiratory electron transport chain;C:integral to membrane, membrane;MOFBP O.I. C.G. H.G.
10.5 99.2 43.5 At5g39210 833917 CRR7 (CHLORORESPIRATORY REDUCTION 7) Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex. O.I. C.G. H.G.
10.4 99.2 66.1 At2g24060 816940 translation initiation factor 3 (IF-3) family protein F:translation initiation factor activity;P:translational initiation;C:chloroplast;OBMPFVA O.I. C.G. H.G.
9.9 99.1 95.7 At3g16250 820871 NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1) encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster. O.I. C.G. H.G.
9.9 99.1 70.6 At1g62780 842577 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast stroma;PMOBAF O.I. C.G. H.G.
9.9 99.1 66.4 At5g55220 835615 trigger factor type chaperone family protein F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding, protein transport;C:chloroplast, chloroplast stroma, chloroplast envelope;BOMPFV O.I. C.G. H.G.
9.7 99.1 34.1 At3g10840 820253 hydrolase, alpha/beta fold family protein F:hydrolase activity, catalytic activity;P:unknown;C:chloroplast envelope;BOMPFAV O.I. C.G. H.G.
9.7 99.1 22.6 At1g22590 838865 MADS-box family protein F:transcription factor activity;P:regulation of transcription;C:unknown;PO O.I. C.G. H.G.
9.5 99.1 49.9 At3g01440 821143 oxygen evolving enhancer 3 (PsbQ) family protein F:calcium ion binding;P:photosynthesis, light reaction;C:chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast, oxygen evolving complex;P O.I. C.G. H.G.
9.3 99.1 78.9 At2g03420 814871 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
9.2 99.1 209.6 At3g52960 824462 peroxiredoxin type 2, putative F:oxidoreductase activity, antioxidant activity;P:defense response to bacterium, peptidyl-cysteine S-nitrosylation;C:thylakoid, chloroplast stroma, chloroplast, plant-type cell wall;OBFPMA O.I. C.G. H.G.
9.1 99.1 45.8 At2g02500 814779 ISPD Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity). O.I. C.G. H.G.
9.1 99.1 42.2 At1g50450 841467 binding / catalytic F:binding, catalytic activity;P:metabolic process;C:chloroplast;BOFMPA O.I. C.G. H.G.
8.8 99.0 117.6 At3g47860 823942 apolipoprotein D-related F:transporter activity, binding;P:transport;C:chloroplast thylakoid membrane, chloroplast;MPOB O.I. C.G. H.G.
8.8 99.0 49.3 At3g45050 823640 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
22.0	99.6	57.4	At1g31690	840056	amine oxidase/ copper ion binding / quinone binding	F:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
15.6	99.5	42.0	At1g07050	837216	CONSTANS-like protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF	O.I.	C.G.	H.G.
14.7	99.4	35.2	At1g23205	838929	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
14.6	99.4	129.4	At5g28500	832943	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;BPO	O.I.	C.G.	H.G.
12.9	99.3	50.9	At5g66470	836779	GTP binding / RNA binding	F:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPF	O.I.	C.G.	H.G.
11.9	99.3	36.0	At5g20935	832218	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;BPO	O.I.	C.G.	H.G.
10.8	99.2	116.3	At1g14345	837996	oxidoreductase	F:oxidoreductase activity;P:oxidation reduction;C:chloroplast thylakoid membrane, chloroplast, membrane;OBP	O.I.	C.G.	H.G.
10.6	99.2	29.7	At5g62140	836334	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
10.6	99.2	28.1	At5g20140	832136	SOUL heme-binding family protein	F:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMA	O.I.	C.G.	H.G.
10.6	99.2	24.3	At2g07695	815371	cytochrome c oxidase subunit II, putative	F:electron carrier activity, cytochrome-c oxidase activity, copper ion binding, heme binding;P:electron transport chain, respiratory electron transport chain;C:integral to membrane, membrane;MOFBP	O.I.	C.G.	H.G.
10.5	99.2	43.5	At5g39210	833917	CRR7 (CHLORORESPIRATORY REDUCTION 7)	Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.	O.I.	C.G.	H.G.
10.4	99.2	66.1	At2g24060	816940	translation initiation factor 3 (IF-3) family protein	F:translation initiation factor activity;P:translational initiation;C:chloroplast;OBMPFVA	O.I.	C.G.	H.G.
9.9	99.1	95.7	At3g16250	820871	NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)	encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.	O.I.	C.G.	H.G.
9.9	99.1	70.6	At1g62780	842577	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast stroma;PMOBAF	O.I.	C.G.	H.G.
9.9	99.1	66.4	At5g55220	835615	trigger factor type chaperone family protein	F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding, protein transport;C:chloroplast, chloroplast stroma, chloroplast envelope;BOMPFV	O.I.	C.G.	H.G.
9.7	99.1	34.1	At3g10840	820253	hydrolase, alpha/beta fold family protein	F:hydrolase activity, catalytic activity;P:unknown;C:chloroplast envelope;BOMPFAV	O.I.	C.G.	H.G.
9.7	99.1	22.6	At1g22590	838865	MADS-box family protein	F:transcription factor activity;P:regulation of transcription;C:unknown;PO	O.I.	C.G.	H.G.
9.5	99.1	49.9	At3g01440	821143	oxygen evolving enhancer 3 (PsbQ) family protein	F:calcium ion binding;P:photosynthesis, light reaction;C:chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast, oxygen evolving complex;P	O.I.	C.G.	H.G.
9.3	99.1	78.9	At2g03420	814871	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
9.2	99.1	209.6	At3g52960	824462	peroxiredoxin type 2, putative	F:oxidoreductase activity, antioxidant activity;P:defense response to bacterium, peptidyl-cysteine S-nitrosylation;C:thylakoid, chloroplast stroma, chloroplast, plant-type cell wall;OBFPMA	O.I.	C.G.	H.G.
9.1	99.1	45.8	At2g02500	814779	ISPD	Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).	O.I.	C.G.	H.G.
9.1	99.1	42.2	At1g50450	841467	binding / catalytic	F:binding, catalytic activity;P:metabolic process;C:chloroplast;BOFMPA	O.I.	C.G.	H.G.
8.8	99.0	117.6	At3g47860	823942	apolipoprotein D-related	F:transporter activity, binding;P:transport;C:chloroplast thylakoid membrane, chloroplast;MPOB	O.I.	C.G.	H.G.
8.8	99.0	49.3	At3g45050	823640	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-MEXP-1100-raw-cel-1378752260
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-MEXP-1100-raw-cel-1378752260 GSE experiment -

GSM ID -

Assay name E-MEXP-1100-raw-cel-1378752260

GSE experiment -