Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-MEXP-1094-raw-cel-1379507553
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
146.799.9309.8At2g17740816283DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POO.I.C.G.H.G.
118.799.993.6At5g40590834057DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;POFO.I.C.G.H.G.
89.099.966.1At1g49000841322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
84.199.976.0At3g55150824681ATEXO70H1 (exocyst subunit EXO70 family protein H1)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
71.199.9135.9At2g44370819044DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;POMFO.I.C.G.H.G.
70.099.9243.1At5g48430834898aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PO.I.C.G.H.G.
66.799.8253.3At5g39580833954peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus, N-terminal protein myristoylation;C:endomembrane system;PFOO.I.C.G.H.G.
65.099.8299.9At4g22470828342protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVAO.I.C.G.H.G.
63.099.877.3At3g21080821660ABC transporter-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
61.799.851.3At5g44910834521Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
61.099.8118.7At1g51800841606leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
58.899.8148.6At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
53.899.8163.3At1g30720839952FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAO.I.C.G.H.G.
46.899.8474.2At5g64120836533peroxidase, putativeencodes a cell wall bound peroxidase that is induced by hypo-osmolarityO.I.C.G.H.G.
44.499.883.4At4g28085828924unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
43.599.8110.6At5g43190834337F-box family protein (FBX6)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;PFOO.I.C.G.H.G.
43.199.8388.1At1g15670838136kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOAFVO.I.C.G.H.G.
43.199.8135.6At3g22060821768receptor protein kinase-relatedcontains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domainO.I.C.G.H.G.
42.299.8374.3At2g43620818964chitinase, putativeF:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVMO.I.C.G.H.G.
42.299.826.7At1g16150838184WAKL4 (WALL ASSOCIATED KINASE-LIKE 4)Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily. Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+.O.I.C.G.H.G.
39.899.8124.4At2g39400818525hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BOPMFVAO.I.C.G.H.G.
38.899.8407.8At1g52200841650unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PFMOO.I.C.G.H.G.
37.999.830.9At1g31350840024F-box family proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PMBOO.I.C.G.H.G.
37.799.726.7At4g09420826524disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMOO.I.C.G.H.G.
36.599.7137.1At2g39200818505MLO12 (MILDEW RESISTANCE LOCUS O 12)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).O.I.C.G.H.G.
36.099.763.9At5g25250832596-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAVO.I.C.G.H.G.
35.999.7200.6At4g12500826862protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:unknown;POBMVFAO.I.C.G.H.G.
31.799.7106.4At1g26380839180FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMO.I.C.G.H.G.
30.699.7356.0At5g44130834436FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)F:molecular_function unknown;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall;PBOMAO.I.C.G.H.G.
30.299.7138.0At1g72060843537serine-type endopeptidase inhibitorF:serine-type endopeptidase inhibitor activity;P:response to oxidative stress;C:endomembrane system;PO.I.C.G.H.G.
30.199.7114.3At1g65390842851ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBO.I.C.G.H.G.
29.399.7104.4At1g19610838548PDF1.4Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
29.299.7652.9At4g35770829730SEN1 (SENESCENCE 1)Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.O.I.C.G.H.G.
29.099.739.4At1g07135837224glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAO.I.C.G.H.G.
28.799.744.3At5g61560836277protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVAO.I.C.G.H.G.
28.199.786.0At4g00330828125CRCK2high overall homology to CRCK1O.I.C.G.H.G.
27.599.738.2At5g07100830601WRKY26Encodes WRKY DNA-binding protein 26 (WRKY26).O.I.C.G.H.G.
27.499.762.4At4g01250827896WRKY22member of WRKY Transcription Factor; Group II-eO.I.C.G.H.G.
27.399.7273.4At3g109852745879SAG20 (SENESCENCE ASSOCIATED GENE 20)A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.O.I.C.G.H.G.
27.399.783.2At5g64440836565AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase)AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.O.I.C.G.H.G.
27.099.739.2At1g26420839184FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAO.I.C.G.H.G.
26.999.767.0At1g25390839125protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
26.899.724.2At5g04310830310pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFOO.I.C.G.H.G.
26.199.733.1At1g05300837029ZIP5member of Fe(II) transporter isolog familyO.I.C.G.H.G.
25.799.7151.6At2g19800816499MIOX2 (MYO-INOSITOL OXYGENASE 2)Encodes a myo-inositol oxygenase family gene.O.I.C.G.H.G.
25.799.771.5At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.O.I.C.G.H.G.
25.399.653.4At3g62150825388PGP21 (P-GLYCOPROTEIN 21)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPVO.I.C.G.H.G.
25.299.6100.3At2g42580818858TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3)Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling.O.I.C.G.H.G.
24.899.6167.1At5g05440830427unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
24.599.658.3At1g22740838880RABG3BGTP-binding protein Rab7O.I.C.G.H.G.
24.399.691.9At1g10340837573ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAO.I.C.G.H.G.
23.199.6161.9At5g211708322435'-AMP-activated protein kinase beta-2 subunit, putativeF:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOBO.I.C.G.H.G.
22.799.679.4At5g28770832990BZO2H3bZIP protein BZO2H3 mRNA, partial cdsO.I.C.G.H.G.
22.799.677.6At3g63380825513calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVO.I.C.G.H.G.
22.699.6100.1At2g19190816436FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)Receptor-like protein kinase. Involved in early defense signaling.O.I.C.G.H.G.
22.299.611.2At3g21780821732UGT71B6 (UDP-glucosyl transferase 71B6)Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.O.I.C.G.H.G.
22.099.6203.0At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOO.I.C.G.H.G.
21.899.6109.9At5g01810830556CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)Encodes a CBL-interacting serine/threonine protein kinase, also has similarities to SOS2 kinase.O.I.C.G.H.G.
21.599.6117.3At3g45300823668IVD (ISOVALERYL-COA-DEHYDROGENASE)Encodes isovaleryl-coenzyme a dehydrogenase.O.I.C.G.H.G.
21.399.6154.1At4g38550830012-F:unknown;P:unknown;C:chloroplast;MFPOBVAO.I.C.G.H.G.
21.199.6167.2At1g68840843216RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)O.I.C.G.H.G.
21.199.642.9At4g36410829793UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)ubiquitin-conjugating enzymeO.I.C.G.H.G.
21.099.633.8At2g42280818829basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMO.I.C.G.H.G.
20.699.6201.8At4g15530827226PPDK (pyruvate orthophosphate dikinase)The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.O.I.C.G.H.G.
20.699.6110.1At2g35930818166PUB23 (PLANT U-BOX 23)Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.O.I.C.G.H.G.
20.599.639.2At3g19850821522phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:endomembrane system;PO.I.C.G.H.G.
20.499.645.5At1g51790841605kinaseF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
20.399.637.7At3g15060820735AtRABA1g (Arabidopsis Rab GTPase homolog A1g)F:GTP binding;P:response to cadmium ion;C:unknown;MOFPBAVO.I.C.G.H.G.
20.299.660.7At1g54740841915-F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBFO.I.C.G.H.G.
20.299.638.6At4g01720828001WRKY47member of WRKY Transcription Factor; Group II-bO.I.C.G.H.G.
20.199.664.3At5g08520830751myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFBO.I.C.G.H.G.
19.999.6350.3At3g30775822833ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5)Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.O.I.C.G.H.G.
19.499.642.3At1g09420837465G6PD4 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4)Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.O.I.C.G.H.G.
19.399.6313.4At3g47340823888ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
19.099.524.4At3g02240820386unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
18.999.597.1At5g56100835709glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PBO.I.C.G.H.G.
18.899.574.8At5g41080834110glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAVO.I.C.G.H.G.
18.899.525.3At1g18380--O.I.C.G.H.G.
18.699.550.2At5g03730831748CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.O.I.C.G.H.G.
18.599.5140.8At1g10070837543ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2)Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.O.I.C.G.H.G.
18.499.5162.6At2g39210818506nodulin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMAO.I.C.G.H.G.
18.499.550.2At4g17070827415peptidyl-prolyl cis-trans isomeraseF:peptidyl-prolyl cis-trans isomerase activity;P:response to oxidative stress;C:unknown;PBMOO.I.C.G.H.G.
18.299.5135.0At4g08850826456kinaseF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVAO.I.C.G.H.G.
18.199.5103.2At4g20860827834FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAMO.I.C.G.H.G.
17.999.5172.5At4g25030828606unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFO.I.C.G.H.G.
17.899.522.9At2g28710817420zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMOO.I.C.G.H.G.
17.799.527.3At4g23190828418CRK11 (CYSTEINE-RICH RLK11)Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)O.I.C.G.H.G.
17.699.5294.2At3g13750820584BGAL1 (Beta galactosidase 1)beta-galactosidase, glycosyl hydrolase family 35O.I.C.G.H.G.
17.699.578.2At4g17245827437zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
17.499.5487.5At4g12470826859protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:defense response to fungus, lipid transport;C:endomembrane system;PBOVMFAO.I.C.G.H.G.
17.499.554.3At4g21410827893protein kinase family proteinF:kinase activity;P:response to abscisic acid stimulus;C:plasma membrane, vacuole;MPOBFVAO.I.C.G.H.G.
17.399.5140.8At3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFOO.I.C.G.H.G.
17.399.5100.8At2g22860816817ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.O.I.C.G.H.G.
17.099.5100.3At3g46280823773protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBOO.I.C.G.H.G.
16.999.5201.5At1g19380838521unknown proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
16.699.530.7At2g02220814753PSKR1 (PHYTOSULFOKIN RECEPTOR 1)Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).O.I.C.G.H.G.
16.699.525.2At4g39070830062zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:response to chitin, regulation of transcription;C:intracellular;POMO.I.C.G.H.G.
16.399.5354.9At3g01290821309band 7 family proteinF:unknown;P:N-terminal protein myristoylation;C:mitochondrion, plasma membrane, vacuole, membrane;BOMFPAVO.I.C.G.H.G.
16.399.546.5At3g07870819978F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
16.299.5219.2At2g39570818542ACT domain-containing proteinF:amino acid binding;P:metabolic process;C:unknown;POBO.I.C.G.H.G.



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