Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-ATMX-33-raw-cel-1562596241
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1377.0100.0515.4At2g04032814931ZIP7 (ZINC TRANSPORTER 7 PRECURSOR)F:cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity;P:cation transport, zinc ion transport, metal ion transport;C:endomembrane system, integral to membrane, membrane;FMPOBO.I.C.G.H.G.
1303.5100.018.5At1g430603767287transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
1124.6100.0548.1At5g53870835468plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVAO.I.C.G.H.G.
1027.0100.0191.5At5g40330834031MYB23 (MYB DOMAIN PROTEIN 23)Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1.O.I.C.G.H.G.
828.2100.0420.1At2g24540816990AFR (ATTENUATED FAR-RED RESPONSE)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFVAO.I.C.G.H.G.
583.3100.02119.7At2g38870818471protease inhibitor, putativePredicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.O.I.C.G.H.G.
556.5100.0130.4At3g09520820109ATEXO70H4 (exocyst subunit EXO70 family protein H4)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
524.6100.0293.7At2g28210817367ATACA2 (ALPHA CARBONIC ANHYDRASE 2)F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:cellular_component unknown;MBPOFVO.I.C.G.H.G.
427.0100.0123.7At3g18170821344transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMBOFO.I.C.G.H.G.
319.9100.06.1At3g19780821515-F:unknown;P:unknown;C:endomembrane system;OMBPFO.I.C.G.H.G.
317.5100.0130.1At5g01780831672oxidoreductaseF:oxidoreductase activity;P:unknown;C:cellular_component unknown;BOMPFO.I.C.G.H.G.
290.4100.056.7At2g36090818182F-box family proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
277.7100.055.4At1g66460842964protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
270.5100.0378.8At2g41250818724haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity, phosphoglycolate phosphatase activity;P:metabolic process;C:mitochondrion;BOMAPFO.I.C.G.H.G.
258.1100.097.6At1g11410837683S-locus protein kinase, putativeF:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
236.6100.095.7At1g74810843820BOR5F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVO.I.C.G.H.G.
231.4100.08.7At3g322203769256transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
204.1100.054.8At2g28260817372ATCNGC15member of Cyclic nucleotide gated channel familyO.I.C.G.H.G.
195.5100.08.8At1g373403767070transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
175.3100.07.1At4g076203770532transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
144.199.9207.6At4g35985829753senescence/dehydration-associated protein-relatedF:unknown;P:unknown;C:chloroplast;MPFOO.I.C.G.H.G.
142.399.951.0At3g13540820556ATMYB5 (MYB DOMAIN PROTEIN 5)Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).O.I.C.G.H.G.
139.199.920.3At4g05280825876transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
136.799.927.6At2g28440817392proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MBOFPVAO.I.C.G.H.G.
131.899.957.3At5g26010832670catalytic/ protein serine/threonine phosphataseF:protein serine/threonine phosphatase activity, catalytic activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PMOFBVO.I.C.G.H.G.
124.299.9250.8At5g06700830559unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAO.I.C.G.H.G.
121.599.914.8At3g21620821716early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOO.I.C.G.H.G.
114.999.9171.6At5g58670835981PLC1 (PHOSPHOLIPASE C 1)phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).O.I.C.G.H.G.
112.899.963.6At5g46350834678WRKY8member of WRKY Transcription Factor; Group II-cO.I.C.G.H.G.
112.699.95.6At4g075503770366transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
108.499.986.0At1g79840844323GL2 (GLABRA 2)Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.O.I.C.G.H.G.
108.399.946.2At5g20820832205auxin-responsive protein-relatedF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO.I.C.G.H.G.
94.899.99.6At3g42340823227transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
94.299.969.6At4g22270828322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
90.899.9178.3At1g21570838758zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFPOO.I.C.G.H.G.
90.099.917.1At4g01110827897-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
86.799.91130.9At1g53210841755sodium/calcium exchanger family protein / calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole;PFBOMAO.I.C.G.H.G.
84.399.9108.5At1g64500842758glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;PMBOFO.I.C.G.H.G.
82.899.996.7At1g80170844357polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMAO.I.C.G.H.G.
80.399.917.0At1g24420839058transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
79.299.9131.7At5g12420831117unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFO.I.C.G.H.G.
79.099.926.1At1g01380838096ETC1 (ENHANCER OF TRY AND CPC 1)ETC1 is involved in trichome and root hair patterning in Arabidopsis.O.I.C.G.H.G.
77.399.98.2At1g67780843103-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
76.899.9131.5At2g33050817867AtRLP26 (Receptor Like Protein 26)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.C.G.H.G.
75.499.919.3At1g09170837437kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBO.I.C.G.H.G.
74.399.9310.3At5g43150834332unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
71.899.9259.0At3g61220825294short-chain dehydrogenase/reductase (SDR) family proteinF:(-)-menthol dehydrogenase activity, oxidoreductase activity, (+)-neomenthol dehydrogenase activity;P:defense response;C:plasma membrane;BOMFPAO.I.C.G.H.G.
71.099.98.4At2g174903768408transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
69.899.9188.5At5g17050831568UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.O.I.C.G.H.G.
65.899.821.4At5g02390830266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAO.I.C.G.H.G.
59.099.815.8At2g25820817124transcription factorencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.O.I.C.G.H.G.
58.099.847.2At1g29720839850protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
57.099.8181.8At3g03640821201BGLU25 (BETA GLUCOSIDASE 25)Encodes beta-glucosidase (GLUC).O.I.C.G.H.G.
57.099.811.6At3g46910823844ubiquitin protein ligase bindingF:ubiquitin protein ligase binding;P:ubiquitin-dependent protein catabolic process;C:cullin-RING ubiquitin ligase complex;MPFOO.I.C.G.H.G.
56.499.859.4At1g22180838823SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
56.099.88.4At5g56070835705unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
55.999.836.4At1g12550837811oxidoreductase family proteinF:in 6 functions;P:metabolic process;C:cellular_component unknown;BOFMPAVO.I.C.G.H.G.
55.899.87.1At3g44080823526F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
55.199.814.8At3g06280819802-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
54.999.813.6At3g08700820017UBC12 (ubiquitin-conjugating enzyme 12)F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:regulation of protein metabolic process, post-translational protein modification;C:cellular_component unknown;MFOPVO.I.C.G.H.G.
54.999.85.5At1g39430840698transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
54.899.816.6At5g15900831447unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
54.599.816.9At4g17860827509unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
54.299.811.1At1g30800839962-F:molecular_function unknown;P:unknown;C:anchored to membrane;POO.I.C.G.H.G.
54.099.821.1At4g24170828517kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFBPVAO.I.C.G.H.G.
53.799.812.7At3g11080820279AtRLP35 (Receptor Like Protein 35)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAVO.I.C.G.H.G.
53.599.87.5At3g42980823354transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
52.599.817.8At4g01190828066ATPIPK10 (Arabidopsis phosphatidylinositol phosphate kinase 10)Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. Preferentially phosphorylates PtdIns4P. Expressed in flowers and inflorescence stems.O.I.C.G.H.G.
52.499.84.5At1g79100844251arginine/serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
52.399.8853.6At5g39570833953unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus;POO.I.C.G.H.G.
52.199.8149.6At3g44450823570unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
51.899.811.8At1g27940839687PGP13 (P-GLYCOPROTEIN 13)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVO.I.C.G.H.G.
51.499.86.4At5g35280833482transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
50.999.812.7At1g30450839924CCC1 (CATION-CHLORIDE CO-TRANSPORTER 1)member of Cation-chloride co-transporter familyO.I.C.G.H.G.
50.499.819.5At2g07070815276transposable element genepseudogene of unknown proteinO.I.C.G.H.G.
50.499.88.8At5g30520833141unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
50.399.834.2At3g22260821796OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:plasma membrane;MPOFVO.I.C.G.H.G.
50.199.816.0At3g26930822309-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBO.I.C.G.H.G.
49.499.86.8At1g34590840363transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
49.099.83.1At5g49590835021unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
48.599.810.2At5g42120834217lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
48.499.824.2At1g615103767597transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
47.799.810.3At2g15640816057F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
47.699.871.7At2g35290818096unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
47.699.87.5At2g18640816379GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4)Encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthaseO.I.C.G.H.G.
47.099.836.5At2g46410819249CPC (CAPRICE)Nuclear-localized R3-type MYB transcription factor. Positive regulator of hair-cell differentiation. Preferentially transcribed in hairless cells. Moves from atrichoblasts into trichoblast via plasmodesmata in a tissue-specific mode. N-terminus and part of the Myb domain are required for this movement, with W76 playing a crucial role. Capability to increase the size-exclusion limit of plasmodesmata. Regulated by WEREWOLF.O.I.C.G.H.G.
45.799.87.4At2g050203768268transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
45.199.841.4At5g07700830663MYB76 (myb domain protein 76)Encodes a putative transcription factor (MYB76).O.I.C.G.H.G.
44.899.85.4At4g078403770284transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
44.699.87.8At3g18180821345transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMOBFO.I.C.G.H.G.
44.499.89.1At4g22370828332unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
44.399.86.8At3g323003769265transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
43.999.839.4At2g42270818828U5 small nuclear ribonucleoprotein helicase, putativeF:in 6 functions;P:unknown;C:unknown;BOMFAPVO.I.C.G.H.G.
43.099.86.5At2g10440815503unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVO.I.C.G.H.G.
42.899.831.0At2g34850818050MEE25 (maternal effect embryo arrest 25)F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy, pollen tube development, nucleotide-sugar metabolic process;C:cellular_component unknown;BOPMAFVO.I.C.G.H.G.
42.899.87.1At2g20805816610-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
42.799.8347.8At2g01450814673ATMPK17member of MAP KinaseO.I.C.G.H.G.
42.699.811.6At4g13320826962unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
42.599.88.4At4g35820829736oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFVO.I.C.G.H.G.
42.599.83.4At2g30925817643unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage