Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-ATMX-33-raw-cel-1562596219
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
96.299.9125.7At2g28210817367ATACA2 (ALPHA CARBONIC ANHYDRASE 2)F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:cellular_component unknown;MBPOFVO.I.C.G.H.G.
75.099.94.4At1g430603767287transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
65.099.848.3At3g18170821344transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMBOFO.I.C.G.H.G.
54.099.843.9At5g40330834031MYB23 (MYB DOMAIN PROTEIN 23)Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1.O.I.C.G.H.G.
40.499.82.7At1g56530842106hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
35.399.713.6At4g17860827509unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
31.399.7104.6At1g21570838758zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFPOO.I.C.G.H.G.
30.599.737.0At1g06100837119fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPVO.I.C.G.H.G.
28.499.774.0At2g04032814931ZIP7 (ZINC TRANSPORTER 7 PRECURSOR)F:cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity;P:cation transport, zinc ion transport, metal ion transport;C:endomembrane system, integral to membrane, membrane;FMPOBO.I.C.G.H.G.
26.899.7246.2At2g04780815021FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN 7)fasciclin-like arabinogalactan-protein 7 (Fla7)O.I.C.G.H.G.
25.599.716.8At1g66460842964protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
24.799.6111.7At5g06700830559unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAO.I.C.G.H.G.
22.899.61765.1At2g05070815055LHCB2.2Encodes Lhcb2.2. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.O.I.C.G.H.G.
21.599.61320.2At4g05320825880UBQ10 (POLYUBIQUITIN 10)One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.O.I.C.G.H.G.
21.599.610.9At2g28440817392proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MBOFPVAO.I.C.G.H.G.
20.299.619.9At5g20820832205auxin-responsive protein-relatedF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO.I.C.G.H.G.
18.899.549.9At1g16610838230SR45SR spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP.O.I.C.G.H.G.
16.999.56.2At2g35870--O.I.C.G.H.G.
16.599.5882.0At2g30570817606PSBW (PHOTOSYSTEM II REACTION CENTER W)Encodes a protein similar to photosystem II reaction center subunit W.O.I.C.G.H.G.
16.599.525.0At5g07700830663MYB76 (myb domain protein 76)Encodes a putative transcription factor (MYB76).O.I.C.G.H.G.
16.599.51.4At3g19780821515-F:unknown;P:unknown;C:endomembrane system;OMBPFO.I.C.G.H.G.
16.499.562.0At3g59010825070pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOO.I.C.G.H.G.
15.299.473.0At5g26820832740ATIREG3 (IRON-REGULATED PROTEIN 3)F:unknown;P:unknown;C:membrane;MPFOBO.I.C.G.H.G.
15.199.460.6At3g23410821922alcohol oxidase-relatedEncodes a fatty alcohol oxidase.O.I.C.G.H.G.
14.799.462.7At5g53870835468plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVAO.I.C.G.H.G.
14.599.41877.4At1g67090843029RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)F:ribulose-bisphosphate carboxylase activity, copper ion binding;P:response to blue light, response to cold, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 10 components;POBO.I.C.G.H.G.
14.199.458.9At1g66500842968zinc finger (C2H2-type) family proteinF:zinc ion binding;P:biological_process unknown;C:intracellular;MFOPO.I.C.G.H.G.
13.499.433.4At5g56850835787unknown proteinF:unknown;P:unknown;C:unknown;OMBFPAVO.I.C.G.H.G.
13.099.41399.8At3g61470825320LHCA2Encodes a component of the light harvesting antenna complex of photosystem I.O.I.C.G.H.G.
12.599.33.6At4g121803769991transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
12.399.38.0At1g01130839359unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.999.3418.1At1g53210841755sodium/calcium exchanger family protein / calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole;PFBOMAO.I.C.G.H.G.
11.499.310.4At5g26080832677proline-rich family proteinF:unknown;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
11.499.32.5At3g42350823228transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
11.399.387.1At2g45990819207unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast stroma;OBPO.I.C.G.H.G.
10.799.235.1At2g30150817567UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOFO.I.C.G.H.G.
10.599.210.8At2g36090818182F-box family proteinF:unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
10.399.216.7At5g46240834666KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.50.6 μm diameter microdomains at the plasma membrane surface.O.I.C.G.H.G.
10.399.23.9At1g340803766908transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
9.899.1126.6At5g16030831460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.H.G.
9.899.122.9At5g01780831672oxidoreductaseF:oxidoreductase activity;P:unknown;C:cellular_component unknown;BOMPFO.I.C.G.H.G.
9.899.111.1At1g55940842045CYP708A1member of CYP708AO.I.C.G.H.G.
9.599.125.0At4g32280829361IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29)Auxin inducible protein.O.I.C.G.H.G.
9.599.18.1At4g03340827969glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:mitochondrion, membrane;MPBVOO.I.C.G.H.G.
9.599.13.8At1g60350842330anac024 (Arabidopsis NAC domain containing protein 24)F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PO.I.C.G.H.G.
9.499.14.7At3g09750820133unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.499.14.6At1g35570840453transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
9.399.1682.0At3g62030825376peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.O.I.C.G.H.G.
9.399.194.3At2g33850817954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAVO.I.C.G.H.G.
9.299.14.5At1g28690839769pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAO.I.C.G.H.G.
9.099.115.8At1g11350837677SD1-13 (S-DOMAIN-1 13)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
8.999.03.1At3g323003769265transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
8.899.01.9At1g348423766925transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
8.799.0524.0At3g05880819757RCI2A (RARE-COLD-INDUCIBLE 2A)Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains.O.I.C.G.H.G.



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