Microarray experiments to specifically-expressed genes

GSM ID -
Assay name E-ATMX-31-raw-cel-1516947882
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
416.0100.0132.5At2g44690819077ARAC9A member of ROP GTPase gene family.O.I.C.G.H.G.
349.6100.0338.9At5g22460832307esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cell wall, vacuole, plant-type cell wall;BPOFO.I.C.G.H.G.
336.6100.067.6At1g07880837303ATMPK13member of MAP KinaseO.I.C.G.H.G.
335.5100.0119.8At2g19850816504-F:molecular_function unknown;P:biological_process unknown;C:unknown;PMVOO.I.C.G.H.G.
286.2100.0500.7At2g27970817341CKS2 (CDK-subunit 2)F:cyclin-dependent protein kinase regulator activity, cyclin-dependent protein kinase activity;P:cell cycle;C:cellular_component unknown;MFOPO.I.C.G.H.G.
259.1100.057.2At3g50610824224unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
231.5100.0262.1At2g11810815657MGDCMGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.O.I.C.G.H.G.
197.6100.087.3At1g45180841086zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBO.I.C.G.H.G.
191.9100.0107.9At1g52940841727PAP5 (PURPLE ACID PHOSPHATASE 5)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFAO.I.C.G.H.G.
179.0100.0331.1At1g69880843324ATH8 (thioredoxin H-type 8)F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
176.5100.082.9At1g19200838503senescence-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
171.3100.0211.0At5g50790835151nodulin MtN3 family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
166.6100.0225.7At1g71380843479ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOFO.I.C.G.H.G.
165.2100.045.6At1g52470841678hydrolaseF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
165.0100.0147.0At1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
164.4100.0136.3At5g18690831987AGP25 (ARABINOGALACTAN PROTEINS 25)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PMOVFBO.I.C.G.H.G.
159.099.9192.6At1g44110841014CYCA1F:cyclin-dependent protein kinase regulator activity;P:response to cyclopentenone, regulation of cell cycle;C:nucleus;MPOFVBO.I.C.G.H.G.
146.899.9331.2At2g04040814938TX1AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.O.I.C.G.H.G.
145.799.942.2At2g27120817254TIL2 (TILTED 2)Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.O.I.C.G.H.G.
142.599.919.6At2g34210817982structural constituent of ribosome / transcription elongation regulator/ transcription initiation factorF:transcription elongation regulator activity, structural constituent of ribosome, transcription initiation factor activity;P:regulation of transcription from RNA polymerase II promoter, translation, positive regulation of RNA elongation from RNA polymerase II promoter;C:ribosome, intracellular;MOFAPBVO.I.C.G.H.G.
141.899.9349.2At2g27190817261PAP12 (PURPLE ACID PHOSPHATASE 12)secreted purple acid phosphatase precursorO.I.C.G.H.G.
141.199.9225.5At2g27960817340CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)catalytic subunit of cyclin dependent kinase 1. physically interact with cyclin-dependent kinases (CDKs) and play an essential, but yet not entirely resolved, role in the regulation of the cell cycleO.I.C.G.H.G.
140.599.9345.8At1g17710838347phosphataseF:phosphatase activity;P:metabolic process;C:unknown;MPOBFO.I.C.G.H.G.
138.999.996.5At1g66040842917VIM4 (VARIANT IN METHYLATION 4)predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH4/VIM4 cDNA through RT-PCR were unsuccessful and analysis of the expression of this gene is difficult since it shares 99% nucleotide identity with ORTH5/VIM2.O.I.C.G.H.G.
135.999.993.8At1g08310837351esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:unknown;BPOMFAO.I.C.G.H.G.
127.299.9404.8At2g44450819052BGLU15 (BETA GLUCOSIDASE 15)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFAO.I.C.G.H.G.
119.899.944.7At3g42725823305unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
117.799.9288.8At1g43800840977acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeF:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOMO.I.C.G.H.G.
117.199.9273.8At3g53620824530AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.O.I.C.G.H.G.
113.699.936.9At1g36920840600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
111.799.999.7At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
111.199.956.7At5g47250834772disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFAO.I.C.G.H.G.
110.499.995.9At1g68290843158ENDO 2 (endonuclease 2)Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro.O.I.C.G.H.G.
107.999.9130.8At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
107.099.9129.2At2g15760816070calmodulin-binding proteinF:calmodulin binding;P:biological_process unknown;C:plasma membrane;PO.I.C.G.H.G.
105.699.945.6At2g43140818916DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBFO.I.C.G.H.G.
102.599.9380.3At5g24660832538LSU2 (RESPONSE TO LOW SULFUR 2)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
101.999.952.7At2g16580816158auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
100.399.954.9At3g16330820880unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
98.299.9116.0At2g03800814906GEK1 (GEKO1)encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype.O.I.C.G.H.G.
96.799.9120.6At2g45130819120SPX3 (SPX DOMAIN GENE 3)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:cellular_component unknown;FMPOO.I.C.G.H.G.
96.699.9135.7At1g08430837363ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).O.I.C.G.H.G.
95.399.935.9At2g16450816143F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
94.499.948.8At1g22090838814emb2204 (embryo defective 2204)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PO.I.C.G.H.G.
94.099.946.0At1g44780841042unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.H.G.
89.399.925.5At1g61450842439unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
88.999.9124.1At1g33940840291-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
86.999.9178.1At2g04000814926transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
85.899.952.5At5g62550836375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVAO.I.C.G.H.G.
85.499.9311.7At2g42570818857unknown proteinF:unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
84.899.926.1At2g01660814695PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.C.G.H.G.
83.399.936.7At3g44510823576-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO.I.C.G.H.G.
81.999.9169.4At2g15690816062pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAO.I.C.G.H.G.
80.899.9100.9At2g44830819092protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVAO.I.C.G.H.G.
80.799.931.2At3g44520--O.I.C.G.H.G.
79.399.9115.0At1g44790841043ChaC-like family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPO.I.C.G.H.G.
79.299.9170.6At2g19990816518PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.O.I.C.G.H.G.
75.799.918.0At1g13370837897histone H3, putativeF:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOO.I.C.G.H.G.
74.999.951.9At3g05630819730PLDP2Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.O.I.C.G.H.G.
73.099.9326.4At2g077833768188-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
71.299.9119.4At2g47260819339WRKY23member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
69.799.9145.9At3g29970822700germination protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
69.499.9139.5At2g44460819053BGLU28 (BETA GLUCOSIDASE 28)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFAO.I.C.G.H.G.
69.399.919.6At1g45100841077polyadenylate-binding protein, putative / PABP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
69.299.9150.7At3g53610824529ATRAB8GTPase AtRAB8 (atrab8)O.I.C.G.H.G.
68.999.9166.8At2g29440817493ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
68.999.990.7At2g03780814905translin family proteinF:sequence-specific DNA binding, DNA binding;P:biological_process unknown;C:unknown;MFAOPO.I.C.G.H.G.
68.599.925.8At5g11940831067subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
67.299.8131.5At1g08650837387PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.O.I.C.G.H.G.
66.499.8252.7At3g02040821175SRG3 (senescence-related gene 3)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BMOFPAVO.I.C.G.H.G.
66.199.8123.0At2g16570816156ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1)Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesisO.I.C.G.H.G.
65.999.845.9At3g54610824626GCN5Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.O.I.C.G.H.G.
65.899.870.0At1g45170841085unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
65.199.8169.3At2g07360815305SH3 domain-containing proteinF:binding;P:unknown;C:cytosol, nucleus, plasma membrane, membrane;OPMFBO.I.C.G.H.G.
65.099.8133.6At4g36350829787PAP25 (PURPLE ACID PHOSPHATASE 25)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFAO.I.C.G.H.G.
64.899.8313.5At5g20150832137SPX1 (SPX DOMAIN GENE 1)F:molecular_function unknown;P:cellular response to phosphate starvation, positive regulation of cellular response to phosphate starvation;C:nucleus;FMPOBAO.I.C.G.H.G.
64.799.857.5At5g17100831573-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
64.699.8143.2At2g41380818736embryo-abundant protein-relatedF:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMAO.I.C.G.H.G.
64.499.844.4At1g334603766895transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
63.899.873.3At2g25790817121leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAVO.I.C.G.H.G.
63.499.872.9At1g23140838922C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFOO.I.C.G.H.G.
63.199.872.9At5g25080832579-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
62.399.8100.1At3g53540824522unknown proteinF:unknown;P:unknown;C:plasma membrane;OMBFPAVO.I.C.G.H.G.
61.099.827.9At3g53760824543tubulin family proteinF:tubulin binding;P:microtubule cytoskeleton organization;C:spindle pole, microtubule organizing center;MFOPO.I.C.G.H.G.
59.999.868.6At3g12510820430unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO.I.C.G.H.G.
59.899.860.5At1g15170838083MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:chloroplast, membrane;BOPFMAO.I.C.G.H.G.
59.499.8208.4At2g01610814690invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
59.499.8162.7At1g45976841106SBP1 (s-ribonuclease binding protein 1)F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFBO.I.C.G.H.G.
59.399.887.8At2g27130817255protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to plasma membrane, anchored to membrane;PO.I.C.G.H.G.
58.699.8111.8At2g07708815383unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
58.399.864.1At3g50570824221hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOPFVO.I.C.G.H.G.
58.199.833.7At1g440603767336transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
57.999.872.3At1g15660838135CENP-C (CENTROMERE PROTEIN C)Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.O.I.C.G.H.G.
57.699.8173.0At2g28510817399Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFBO.I.C.G.H.G.
57.499.8137.3At3g27400822361pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOO.I.C.G.H.G.
56.999.8245.5At1g73010843632phosphataseF:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
56.899.8123.3At2g17280816234phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;FOPBO.I.C.G.H.G.
56.799.866.1At2g27880817334AGO5 (ARGONAUTE 5)F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBVO.I.C.G.H.G.
56.099.860.1At2g27100817252SE (SERRATE)Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia.O.I.C.G.H.G.
55.999.833.9At4g02170828119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.



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