Microarray experiments to specifically-expressed genes

Assay name E-ATMX-25-raw-cel-1441077441
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
96.499.962.3At5g55570835651unknown proteinF:unknown;P:unknown;C:chloroplast;PMO.I.C.G.H.G.
33.099.7203.2At5g36910833659THI2.2 (THIONIN 2.2)Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.O.I.C.G.H.G.
22.199.638.7At4g15510827223photosystem II reaction center PsbP family proteinF:calcium ion binding;P:photosynthesis;C:in 9 components;PBOO.I.C.G.H.G.
20.799.645.5At5g64050836526ERS (GLUTAMATE TRNA SYNTHETASE)Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.O.I.C.G.H.G.
15.999.5275.5At3g62460825420-F:unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
14.899.433.2At5g20140832136SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMAO.I.C.G.H.G.
13.699.498.6At1g04420839524aldo/keto reductase family proteinF:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:chloroplast, chloroplast stroma, chloroplast envelope;BOMFPAO.I.C.G.H.G. binding / RNA bindingF:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPFO.I.C.G.H.G.
9.499.172.4At1g60550842350ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPAO.I.C.G.H.G.
9.499.163.2At2g33180817879unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma;PBOO.I.C.G.H.G. / transporterF:transporter activity, binding;P:transport, response to nematode;C:mitochondrial inner membrane, chloroplast, chloroplast envelope;MFPOVO.I.C.G.H.G. proteinF:unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPO.I.C.G.H.G. synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeF:pyridoxal phosphate binding, cysteine synthase activity, catalytic activity;P:cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process;C:unknown;BOFPMAO.I.C.G.H.G.
9.099.1121.5At2g23670816898YCF37 (Arabidopsis homolog of Synechocystis YCF37)F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;POO.I.C.G.H.G.
8.899.060.4At4g38100829966unknown proteinF:unknown;P:unknown;C:chloroplast thylakoid membrane;PBOO.I.C.G.H.G.
8.799.077.3At3g24590822055PLSP1 (plastidic type I signal peptidase 1)Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).O.I.C.G.H.G.
8.799.042.0At3g60370825208immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinEncodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined.O.I.C.G.H.G.
8.699.0132.4At3g48420824000haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAVO.I.C.G.H.G.

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