CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-ATMX-25-raw-cel-1441077441

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
96.4 99.9 62.3 At5g55570 835651 unknown protein F:unknown;P:unknown;C:chloroplast;PM O.I. C.G. H.G.
33.0 99.7 203.2 At5g36910 833659 THI2.2 (THIONIN 2.2) Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
22.1 99.6 38.7 At4g15510 827223 photosystem II reaction center PsbP family protein F:calcium ion binding;P:photosynthesis;C:in 9 components;PBO O.I. C.G. H.G.
20.7 99.6 45.5 At5g64050 836526 ERS (GLUTAMATE TRNA SYNTHETASE) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. O.I. C.G. H.G.
15.9 99.5 275.5 At3g62460 825420 - F:unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
14.8 99.4 33.2 At5g20140 832136 SOUL heme-binding family protein F:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMA O.I. C.G. H.G.
13.6 99.4 98.6 At1g04420 839524 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:chloroplast, chloroplast stroma, chloroplast envelope;BOMFPA O.I. C.G. H.G.
10.1 99.2 45.1 At5g66470 836779 GTP binding / RNA binding F:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPF O.I. C.G. H.G.
9.4 99.1 72.4 At1g60550 842350 ECHID (ENOYL-COA HYDRATASE/ISOMERASE D) F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPA O.I. C.G. H.G.
9.4 99.1 63.2 At2g33180 817879 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast stroma;PBO O.I. C.G. H.G.
9.1 99.1 51.8 At3g51870 824350 binding / transporter F:transporter activity, binding;P:transport, response to nematode;C:mitochondrial inner membrane, chloroplast, chloroplast envelope;MFPOV O.I. C.G. H.G.
9.1 99.1 39.6 At4g30620 829185 unknown protein F:unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOP O.I. C.G. H.G.
9.1 99.1 15.2 At5g28030 832873 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative F:pyridoxal phosphate binding, cysteine synthase activity, catalytic activity;P:cysteine biosynthetic process from serine, cysteine biosynthetic process, metabolic process;C:unknown;BOFPMA O.I. C.G. H.G.
9.0 99.1 121.5 At2g23670 816898 YCF37 (Arabidopsis homolog of Synechocystis YCF37) F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;PO O.I. C.G. H.G.
8.8 99.0 65.7 At4g16390 827333 - F:unknown;P:unknown;C:chloroplast;POFMBA O.I. C.G. H.G.
8.8 99.0 60.4 At4g38100 829966 unknown protein F:unknown;P:unknown;C:chloroplast thylakoid membrane;PBO O.I. C.G. H.G.
8.7 99.0 77.3 At3g24590 822055 PLSP1 (plastidic type I signal peptidase 1) Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33). O.I. C.G. H.G.
8.7 99.0 42.0 At3g60370 825208 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. O.I. C.G. H.G.
8.6 99.0 132.4 At3g48420 824000 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAV O.I. C.G. H.G.

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