Microarray experiments to specifically-expressed genes

Assay name E-ATMX-25-raw-cel-1441077398
GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
27.999.733.5At5g55570835651unknown proteinF:unknown;P:unknown;C:chloroplast;PMO.I.C.G.H.G.
26.799.742.6At4g15510827223photosystem II reaction center PsbP family proteinF:calcium ion binding;P:photosynthesis;C:in 9 components;PBOO.I.C.G.H.G.
18.999.537.5At5g20140832136SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBPMAO.I.C.G.H.G.
17.599.563.6At2g02500814779ISPDEncodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).O.I.C.G.H.G.
13.999.412.2At2g35700818139ERF38 (ERF FAMILY PROTEIN 38)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism.O.I.C.G.H.G.
13.299.470.3At3g59780825147-F:molecular_function unknown;P:biological_process unknown;C:nucleus, chloroplast;OBMFPVO.I.C.G.H.G.
12.299.357.9At1g62250842522unknown proteinF:unknown;P:unknown;C:chloroplast;PO.I.C.G.H.G.
12.099.3140.0At2g23670816898YCF37 (Arabidopsis homolog of Synechocystis YCF37)F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;POO.I.C.G.H.G.
11.499.375.9At1g62780842577unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast stroma;PMOBAFO.I.C.G.H.G.
11.499.333.2At3g48720824033transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G. / catalyticF:binding, catalytic activity;P:metabolic process;C:chloroplast;BOFMPAO.I.C.G.H.G.
9.599.1251.3At5g08050830699-F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast;POO.I.C.G.H.G.
9.399.165.9At3g29030822543EXPA5 (EXPANSIN A5)Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
9.399.135.6At4g28780828999GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G. (ARABINOGALACTAN PROTEIN 17)AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.O.I.C.G.H.G.
9.099.1207.3At3g52960824462peroxiredoxin type 2, putativeF:oxidoreductase activity, antioxidant activity;P:defense response to bacterium, peptidyl-cysteine S-nitrosylation;C:thylakoid, chloroplast stroma, chloroplast, plant-type cell wall;OBFPMAO.I.C.G.H.G. NPH3 family proteinF:signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PO.I.C.G.H.G.

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