CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID -

Assay name E-ATMX-13-raw-cel-1556149823

GSE experiment -

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
223.2 100.0 198.0 At1g36240 840530 60S ribosomal protein L30 (RPL30A) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit;MOAFPB O.I. C.G. H.G.
191.6 100.0 171.5 At2g17820 816291 ATHK1 (histidine kinase 1) Encodes a member of the histidine kinase family. O.I. C.G. H.G.
183.4 100.0 245.5 At3g27400 822361 pectate lyase family protein F:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO O.I. C.G. H.G.
161.7 99.9 133.3 At5g40040 834001 60S acidic ribosomal protein P2 (RPP2E) F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MPFOAB O.I. C.G. H.G.
151.0 99.9 101.4 At1g59930 842287 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
134.8 99.9 79.8 At2g15790 816074 SQN (SQUINT) SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. O.I. C.G. H.G.
127.2 99.9 42.6 At2g03040 814833 transmembrane protein-related F:unknown;P:transport;C:integral to membrane;MPOF O.I. C.G. H.G.
125.5 99.9 153.7 At2g20800 816609 NDB4 (NAD(P)H dehydrogenase B4) F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAM O.I. C.G. H.G.
121.2 99.9 192.5 At1g71380 843479 ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOF O.I. C.G. H.G.
114.5 99.9 83.1 At1g51380 841562 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative F:helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding;P:unknown;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
108.0 99.9 280.9 At2g01610 814690 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
99.6 99.9 67.0 At1g67120 843032 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / transcription factor binding F:nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding;P:regulation of transcription, DNA-dependent, regulation of protein complex assembly;C:chloroplast envelope;OMBFPVA O.I. C.G. H.G.
91.1 99.9 169.6 At5g25190 832590 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. O.I. C.G. H.G.
89.4 99.9 81.3 At3g16870 820942 zinc finger (GATA type) family protein F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;FPMO O.I. C.G. H.G.
88.8 99.9 21.8 At3g48130 3769680 - ribosomal protein L13 homolog O.I. C.G. H.G.
88.3 99.9 41.7 At2g43140 818916 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF O.I. C.G. H.G.
74.4 99.9 44.1 At5g43980 834421 PDLP1 (PLASMODESMATA-LOCATED PROTEIN 1) Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The cytoplasmic C-terminal portion of the protein is connected to the apoplastic N-terminal portion of the protein by a single transmembrane domain (TMD). It is transported to the plasmodesmata through the secretory pathway. PDLP1 has two DUF26 domains and a signal peptide, but the proper localization of the protein appears to depend on the TMD. O.I. C.G. H.G.
73.0 99.9 17.6 At2g47860 819398 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P O.I. C.G. H.G.
69.3 99.9 39.0 At5g11410 831012 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
68.0 99.9 124.7 At2g16570 816156 ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1) Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis O.I. C.G. H.G.
65.2 99.8 106.2 At1g33940 840291 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
64.9 99.8 136.8 At1g03820 839400 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMB O.I. C.G. H.G.
63.4 99.8 45.3 At5g11510 831023 MYB3R-4 (myb domain protein 3R-4) Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4 O.I. C.G. H.G.
62.7 99.8 48.9 At1g52850 3767446 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
62.0 99.8 88.4 At2g44830 819092 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVA O.I. C.G. H.G.
61.4 99.8 70.2 At2g42710 818871 ribosomal protein L1 family protein F:structural constituent of ribosome, RNA binding;P:translation, RNA processing;C:ribosome, intracellular, large ribosomal subunit;BOMFPAV O.I. C.G. H.G.
60.4 99.8 55.2 At5g19260 832046 unknown protein F:unknown;P:unknown;C:unknown;MOFPBV O.I. C.G. H.G.
56.0 99.8 99.1 At1g23410 838949 ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) F:protein binding, structural constituent of ribosome;P:protein ubiquitination during ubiquitin-dependent protein catabolic process, protein modification process, translation;C:cytosolic small ribosomal subunit, plasma membrane;MPOFVAB O.I. C.G. H.G.
55.1 99.8 37.3 At1g22090 838814 emb2204 (embryo defective 2204) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;P O.I. C.G. H.G.
54.0 99.8 140.3 At2g04000 814926 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
54.0 99.8 25.8 At5g08600 830761 U3 ribonucleoprotein (Utp) family protein F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA O.I. C.G. H.G.
49.9 99.8 86.3 At2g19670 816486 PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A) F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA O.I. C.G. H.G.
47.4 99.8 97.8 At2g45860 819194 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
45.9 99.8 39.8 At2g43650 818967 EMB2777 (EMBRYO DEFECTIVE 2777) F:molecular_function unknown;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
45.8 99.8 43.3 At5g12330 831108 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. O.I. C.G. H.G.
45.5 99.8 36.2 At3g62100 825383 IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30) Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. O.I. C.G. H.G.
45.4 99.8 72.9 At2g46920 819306 POL (poltergeist) Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS. O.I. C.G. H.G.
45.2 99.8 111.6 At5g26220 832691 ChaC-like family protein F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP O.I. C.G. H.G.
43.5 99.8 254.8 At2g44860 819095 60S ribosomal protein L24, putative F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOAFPB O.I. C.G. H.G.
42.5 99.8 92.2 At2g47260 819339 WRKY23 member of WRKY Transcription Factor; Group I O.I. C.G. H.G.
42.5 99.8 32.9 At5g12220 831096 las1-like family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
42.3 99.8 65.6 At2g16780 816179 MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2) Encodes a WD-40 repeat protein similar to yeast MSI1. O.I. C.G. H.G.
42.1 99.8 39.6 At5g18750 831993 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
41.9 99.8 24.7 At1g59540 842245 ZCF125 Encodes a kinesin-like protein. O.I. C.G. H.G.
41.6 99.8 19.3 At3g23950 821978 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
40.9 99.8 31.5 At5g20540 832176 ATBRXL4 (BREVIS RADIX-LIKE 4) Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. O.I. C.G. H.G.
40.5 99.8 79.7 At2g39220 818507 PLP6 (PATATIN-LIKE PROTEIN 6) F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMF O.I. C.G. H.G.
40.3 99.8 38.6 At2g26710 817212 BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1) Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. O.I. C.G. H.G.
40.2 99.8 83.9 At5g20600 832182 - F:molecular_function unknown;P:rRNA processing;C:preribosome, small subunit precursor;MFOPB O.I. C.G. H.G.
39.9 99.8 213.0 At2g42570 818857 unknown protein F:unknown;P:biological_process unknown;C:vacuole;P O.I. C.G. H.G.
39.9 99.8 75.7 At2g43780 818981 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
39.4 99.8 16.3 At3g49770 824139 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
38.1 99.8 235.8 At3g44750 823605 HDA3 (HISTONE DEACETYLASE 3) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. O.I. C.G. H.G.
37.6 99.7 38.1 At1g23100 838918 10 kDa chaperonin, putative F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV O.I. C.G. H.G.
37.5 99.7 117.3 At2g19990 816518 PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE) Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive. O.I. C.G. H.G.
37.2 99.7 34.1 At5g20550 832177 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
36.4 99.7 20.0 At2g39820 818569 eukaryotic translation initiation factor 6, putative / eIF-6, putative F:ribosome binding, translation initiation factor activity;P:translational initiation, mature ribosome assembly;C:cellular_component unknown;AOMFP O.I. C.G. H.G.
36.3 99.7 262.0 At2g39700 818553 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
35.6 99.7 157.9 At2g42740 818874 RPL16A encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. O.I. C.G. H.G.
35.1 99.7 144.0 At5g12110 831084 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) F:translation elongation factor activity;P:translational elongation;C:eukaryotic translation elongation factor 1 complex;MOPF O.I. C.G. H.G.
35.1 99.7 50.7 At5g59240 836042 40S ribosomal protein S8 (RPS8B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MAOFP O.I. C.G. H.G.
34.9 99.7 134.7 At2g28510 817399 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFB O.I. C.G. H.G.
34.8 99.7 119.0 At2g45440 819152 DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE) Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast. O.I. C.G. H.G.
34.8 99.7 95.1 At3g16810 820934 APUM24 (Arabidopsis Pumilio 24) F:RNA binding, binding;P:unknown;C:nucleolus;MFPOB O.I. C.G. H.G.
34.0 99.7 113.8 At5g25780 832647 EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2) member of eIF3b - eukaryotic initiation factor 3b O.I. C.G. H.G.
34.0 99.7 24.2 At5g56970 835799 CKX3 (CYTOKININ OXIDASE 3) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
33.4 99.7 56.0 At3g16840 820937 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
32.9 99.7 64.2 At2g39795 818565 mitochondrial glycoprotein family protein / MAM33 family protein F:unknown;P:unknown;C:mitochondrion, mitochondrial matrix;PFOMB O.I. C.G. H.G.
32.7 99.7 35.5 At3g15357 820774 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;OMBFPVA O.I. C.G. H.G.
32.5 99.7 214.2 At5g24660 832538 LSU2 (RESPONSE TO LOW SULFUR 2) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
32.3 99.7 234.4 At1g51510 841576 Y14 This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm. O.I. C.G. H.G.
32.2 99.7 74.8 At5g38890 833880 exoribonuclease-related F:RNA binding;P:biological_process unknown;C:cellular_component unknown;FMAOP O.I. C.G. H.G.
32.0 99.7 23.9 At4g23720 828472 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
31.9 99.7 10.2 At4g16030 827287 structural constituent of ribosome F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOFP O.I. C.G. H.G.
31.5 99.7 23.6 At2g07140 815283 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
31.3 99.7 48.6 At1g33450 840238 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
31.1 99.7 67.7 At4g25530 828658 FWA Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation. O.I. C.G. H.G.
30.7 99.7 30.7 At3g16980 820954 NRPB9A One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265 O.I. C.G. H.G.
30.6 99.7 46.5 At1g60850 842377 ATRPAC42 F:DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding;P:transcription;C:nucleolus;OMFAP O.I. C.G. H.G.
30.6 99.7 40.9 At5g10510 830915 AIL6 (AINTEGUMENTA-LIKE 6) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. O.I. C.G. H.G.
30.4 99.7 197.8 At2g44450 819052 BGLU15 (BETA GLUCOSIDASE 15) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFA O.I. C.G. H.G.
29.8 99.7 43.7 At3g46770 823830 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
29.7 99.7 43.1 At5g61480 836269 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
29.5 99.7 144.7 At5g11340 831005 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFAP O.I. C.G. H.G.
29.5 99.7 50.2 At2g04090 814945 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
29.5 99.7 35.6 At5g12980 831138 rcd1-like cell differentiation protein, putative F:molecular_function unknown;P:multicellular organismal development;C:unknown;MFPO O.I. C.G. H.G.
29.5 99.7 21.4 At1g50400 841462 porin family protein F:voltage-gated anion channel activity;P:anion transport;C:mitochondrial outer membrane;MFOP O.I. C.G. H.G.
29.3 99.7 278.1 At3g16780 820931 60S ribosomal protein L19 (RPL19B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MAOFP O.I. C.G. H.G.
29.3 99.7 19.4 At5g17270 831592 tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;OBMAFP O.I. C.G. H.G.
29.1 99.7 66.8 At5g24840 832553 tRNA (guanine-N7-)-methyltransferase F:tRNA (guanine-N7-)-methyltransferase activity;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, tRNA modification;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
29.0 99.7 31.9 At1g31320 840020 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
29.0 99.7 28.1 At2g16580 816158 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
29.0 99.7 20.0 At1g55610 842010 BRL1 (BRI 1 LIKE) mutant has Altered vascular cell differentiation; LRR Receptor Kinase O.I. C.G. H.G.
29.0 99.7 12.2 At1g58160 842183 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.9 99.7 75.2 At1g01940 839309 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPA O.I. C.G. H.G.
28.9 99.7 62.1 At1g68360 843165 zinc finger protein-related F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO O.I. C.G. H.G.
28.8 99.7 19.0 At5g10850 830952 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
28.3 99.7 80.9 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
28.3 99.7 6.4 At4g13985 827034 FBD1 (FBD-ASSOCIATED F-BOX PROTEIN) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.1 99.7 241.7 At2g39390 818524 60S ribosomal protein L35 (RPL35B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOBAFP O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
223.2	100.0	198.0	At1g36240	840530	60S ribosomal protein L30 (RPL30A)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit;MOAFPB	O.I.	C.G.	H.G.
191.6	100.0	171.5	At2g17820	816291	ATHK1 (histidine kinase 1)	Encodes a member of the histidine kinase family.	O.I.	C.G.	H.G.
183.4	100.0	245.5	At3g27400	822361	pectate lyase family protein	F:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
161.7	99.9	133.3	At5g40040	834001	60S acidic ribosomal protein P2 (RPP2E)	F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MPFOAB	O.I.	C.G.	H.G.
151.0	99.9	101.4	At1g59930	842287	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
134.8	99.9	79.8	At2g15790	816074	SQN (SQUINT)	SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot.	O.I.	C.G.	H.G.
127.2	99.9	42.6	At2g03040	814833	transmembrane protein-related	F:unknown;P:transport;C:integral to membrane;MPOF	O.I.	C.G.	H.G.
125.5	99.9	153.7	At2g20800	816609	NDB4 (NAD(P)H dehydrogenase B4)	F:NADH dehydrogenase activity;P:unknown;C:extrinsic to mitochondrial inner membrane, mitochondrion, plastid;BOFPAM	O.I.	C.G.	H.G.
121.2	99.9	192.5	At1g71380	843479	ATCEL3 (ARABIDOPSIS THALIANA CELLULASE 3)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plasma membrane, plant-type cell wall;PBMOF	O.I.	C.G.	H.G.
114.5	99.9	83.1	At1g51380	841562	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative	F:helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding;P:unknown;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
108.0	99.9	280.9	At2g01610	814690	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
99.6	99.9	67.0	At1g67120	843032	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / transcription factor binding	F:nucleoside-triphosphatase activity, ATPase activity, transcription factor binding, nucleotide binding, ATP binding;P:regulation of transcription, DNA-dependent, regulation of protein complex assembly;C:chloroplast envelope;OMBFPVA	O.I.	C.G.	H.G.
91.1	99.9	169.6	At5g25190	832590	ethylene-responsive element-binding protein, putative	encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.	O.I.	C.G.	H.G.
89.4	99.9	81.3	At3g16870	820942	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;FPMO	O.I.	C.G.	H.G.
88.8	99.9	21.8	At3g48130	3769680	-	ribosomal protein L13 homolog	O.I.	C.G.	H.G.
88.3	99.9	41.7	At2g43140	818916	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF	O.I.	C.G.	H.G.
74.4	99.9	44.1	At5g43980	834421	PDLP1 (PLASMODESMATA-LOCATED PROTEIN 1)	Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The cytoplasmic C-terminal portion of the protein is connected to the apoplastic N-terminal portion of the protein by a single transmembrane domain (TMD). It is transported to the plasmodesmata through the secretory pathway. PDLP1 has two DUF26 domains and a signal peptide, but the proper localization of the protein appears to depend on the TMD.	O.I.	C.G.	H.G.
73.0	99.9	17.6	At2g47860	819398	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P	O.I.	C.G.	H.G.
69.3	99.9	39.0	At5g11410	831012	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
68.0	99.9	124.7	At2g16570	816156	ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1)	Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis	O.I.	C.G.	H.G.
65.2	99.8	106.2	At1g33940	840291	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
64.9	99.8	136.8	At1g03820	839400	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMB	O.I.	C.G.	H.G.
63.4	99.8	45.3	At5g11510	831023	MYB3R-4 (myb domain protein 3R-4)	Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4	O.I.	C.G.	H.G.
62.7	99.8	48.9	At1g52850	3767446	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
62.0	99.8	88.4	At2g44830	819092	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, nucleus;MOPFBVA	O.I.	C.G.	H.G.
61.4	99.8	70.2	At2g42710	818871	ribosomal protein L1 family protein	F:structural constituent of ribosome, RNA binding;P:translation, RNA processing;C:ribosome, intracellular, large ribosomal subunit;BOMFPAV	O.I.	C.G.	H.G.
60.4	99.8	55.2	At5g19260	832046	unknown protein	F:unknown;P:unknown;C:unknown;MOFPBV	O.I.	C.G.	H.G.
56.0	99.8	99.1	At1g23410	838949	ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA)	F:protein binding, structural constituent of ribosome;P:protein ubiquitination during ubiquitin-dependent protein catabolic process, protein modification process, translation;C:cytosolic small ribosomal subunit, plasma membrane;MPOFVAB	O.I.	C.G.	H.G.
55.1	99.8	37.3	At1g22090	838814	emb2204 (embryo defective 2204)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;P	O.I.	C.G.	H.G.
54.0	99.8	140.3	At2g04000	814926	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
54.0	99.8	25.8	At5g08600	830761	U3 ribonucleoprotein (Utp) family protein	F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA	O.I.	C.G.	H.G.
49.9	99.8	86.3	At2g19670	816486	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA	O.I.	C.G.	H.G.
47.4	99.8	97.8	At2g45860	819194	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
45.9	99.8	39.8	At2g43650	818967	EMB2777 (EMBRYO DEFECTIVE 2777)	F:molecular_function unknown;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
45.8	99.8	43.3	At5g12330	831108	LRP1 (LATERAL ROOT PRIMORDIUM 1)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.	O.I.	C.G.	H.G.
45.5	99.8	36.2	At3g62100	825383	IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30)	Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development.	O.I.	C.G.	H.G.
45.4	99.8	72.9	At2g46920	819306	POL (poltergeist)	Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.	O.I.	C.G.	H.G.
45.2	99.8	111.6	At5g26220	832691	ChaC-like family protein	F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP	O.I.	C.G.	H.G.
43.5	99.8	254.8	At2g44860	819095	60S ribosomal protein L24, putative	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOAFPB	O.I.	C.G.	H.G.
42.5	99.8	92.2	At2g47260	819339	WRKY23	member of WRKY Transcription Factor; Group I	O.I.	C.G.	H.G.
42.5	99.8	32.9	At5g12220	831096	las1-like family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
42.3	99.8	65.6	At2g16780	816179	MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2)	Encodes a WD-40 repeat protein similar to yeast MSI1.	O.I.	C.G.	H.G.
42.1	99.8	39.6	At5g18750	831993	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
41.9	99.8	24.7	At1g59540	842245	ZCF125	Encodes a kinesin-like protein.	O.I.	C.G.	H.G.
41.6	99.8	19.3	At3g23950	821978	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
40.9	99.8	31.5	At5g20540	832176	ATBRXL4 (BREVIS RADIX-LIKE 4)	Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.	O.I.	C.G.	H.G.
40.5	99.8	79.7	At2g39220	818507	PLP6 (PATATIN-LIKE PROTEIN 6)	F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:unknown;PBOMF	O.I.	C.G.	H.G.
40.3	99.8	38.6	At2g26710	817212	BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1)	Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.	O.I.	C.G.	H.G.
40.2	99.8	83.9	At5g20600	832182	-	F:molecular_function unknown;P:rRNA processing;C:preribosome, small subunit precursor;MFOPB	O.I.	C.G.	H.G.
39.9	99.8	213.0	At2g42570	818857	unknown protein	F:unknown;P:biological_process unknown;C:vacuole;P	O.I.	C.G.	H.G.
39.9	99.8	75.7	At2g43780	818981	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
39.4	99.8	16.3	At3g49770	824139	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
38.1	99.8	235.8	At3g44750	823605	HDA3 (HISTONE DEACETYLASE 3)	Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.	O.I.	C.G.	H.G.
37.6	99.7	38.1	At1g23100	838918	10 kDa chaperonin, putative	F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV	O.I.	C.G.	H.G.
37.5	99.7	117.3	At2g19990	816518	PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)	Encodes a PR-1-like protein homolog that is differentially expressed in resistant compared to susceptible cultivars by powdery mildew infection. The deduced amino acid sequence has 24 amino acids comprising the signal peptide and 140 amino acids of the mature peptide (15 kDa). Northern blot analysis showed accumulation of the corresponding mRNA 12 h after inoculation of resistant barley cultivars with Erysiphe graminis. Though the Genbank record for the cDNA associated to this gene model is called 'PR-1', the sequence actually corresponds to PR-1-like. Expression of this gene is not salicylic-acid responsive.	O.I.	C.G.	H.G.
37.2	99.7	34.1	At5g20550	832177	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
36.4	99.7	20.0	At2g39820	818569	eukaryotic translation initiation factor 6, putative / eIF-6, putative	F:ribosome binding, translation initiation factor activity;P:translational initiation, mature ribosome assembly;C:cellular_component unknown;AOMFP	O.I.	C.G.	H.G.
36.3	99.7	262.0	At2g39700	818553	ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)	putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
35.6	99.7	157.9	At2g42740	818874	RPL16A	encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.	O.I.	C.G.	H.G.
35.1	99.7	144.0	At5g12110	831084	elongation factor 1B alpha-subunit 1 (eEF1Balpha1)	F:translation elongation factor activity;P:translational elongation;C:eukaryotic translation elongation factor 1 complex;MOPF	O.I.	C.G.	H.G.
35.1	99.7	50.7	At5g59240	836042	40S ribosomal protein S8 (RPS8B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MAOFP	O.I.	C.G.	H.G.
34.9	99.7	134.7	At2g28510	817399	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleolus;POMFB	O.I.	C.G.	H.G.
34.8	99.7	119.0	At2g45440	819152	DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE)	Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.	O.I.	C.G.	H.G.
34.8	99.7	95.1	At3g16810	820934	APUM24 (Arabidopsis Pumilio 24)	F:RNA binding, binding;P:unknown;C:nucleolus;MFPOB	O.I.	C.G.	H.G.
34.0	99.7	113.8	At5g25780	832647	EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2)	member of eIF3b - eukaryotic initiation factor 3b	O.I.	C.G.	H.G.
34.0	99.7	24.2	At5g56970	835799	CKX3 (CYTOKININ OXIDASE 3)	It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
33.4	99.7	56.0	At3g16840	820937	ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding	F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
32.9	99.7	64.2	At2g39795	818565	mitochondrial glycoprotein family protein / MAM33 family protein	F:unknown;P:unknown;C:mitochondrion, mitochondrial matrix;PFOMB	O.I.	C.G.	H.G.
32.7	99.7	35.5	At3g15357	820774	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;OMBFPVA	O.I.	C.G.	H.G.
32.5	99.7	214.2	At5g24660	832538	LSU2 (RESPONSE TO LOW SULFUR 2)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
32.3	99.7	234.4	At1g51510	841576	Y14	This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.	O.I.	C.G.	H.G.
32.2	99.7	74.8	At5g38890	833880	exoribonuclease-related	F:RNA binding;P:biological_process unknown;C:cellular_component unknown;FMAOP	O.I.	C.G.	H.G.
32.0	99.7	23.9	At4g23720	828472	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
31.9	99.7	10.2	At4g16030	827287	structural constituent of ribosome	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOFP	O.I.	C.G.	H.G.
31.5	99.7	23.6	At2g07140	815283	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
31.3	99.7	48.6	At1g33450	840238	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
31.1	99.7	67.7	At4g25530	828658	FWA	Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation.	O.I.	C.G.	H.G.
30.7	99.7	30.7	At3g16980	820954	NRPB9A	One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265	O.I.	C.G.	H.G.
30.6	99.7	46.5	At1g60850	842377	ATRPAC42	F:DNA-directed RNA polymerase activity, protein dimerization activity, DNA binding;P:transcription;C:nucleolus;OMFAP	O.I.	C.G.	H.G.
30.6	99.7	40.9	At5g10510	830915	AIL6 (AINTEGUMENTA-LIKE 6)	Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.	O.I.	C.G.	H.G.
30.4	99.7	197.8	At2g44450	819052	BGLU15 (BETA GLUCOSIDASE 15)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cell wall, plant-type cell wall;BOPMFA	O.I.	C.G.	H.G.
29.8	99.7	43.7	At3g46770	823830	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
29.7	99.7	43.1	At5g61480	836269	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
29.5	99.7	144.7	At5g11340	831005	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFAP	O.I.	C.G.	H.G.
29.5	99.7	50.2	At2g04090	814945	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
29.5	99.7	35.6	At5g12980	831138	rcd1-like cell differentiation protein, putative	F:molecular_function unknown;P:multicellular organismal development;C:unknown;MFPO	O.I.	C.G.	H.G.
29.5	99.7	21.4	At1g50400	841462	porin family protein	F:voltage-gated anion channel activity;P:anion transport;C:mitochondrial outer membrane;MFOP	O.I.	C.G.	H.G.
29.3	99.7	278.1	At3g16780	820931	60S ribosomal protein L19 (RPL19B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MAOFP	O.I.	C.G.	H.G.
29.3	99.7	19.4	At5g17270	831592	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:biological_process unknown;C:cellular_component unknown;OBMAFP	O.I.	C.G.	H.G.
29.1	99.7	66.8	At5g24840	832553	tRNA (guanine-N7-)-methyltransferase	F:tRNA (guanine-N7-)-methyltransferase activity;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, tRNA modification;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
29.0	99.7	31.9	At1g31320	840020	LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
29.0	99.7	28.1	At2g16580	816158	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
29.0	99.7	20.0	At1g55610	842010	BRL1 (BRI 1 LIKE)	mutant has Altered vascular cell differentiation; LRR Receptor Kinase	O.I.	C.G.	H.G.
29.0	99.7	12.2	At1g58160	842183	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.9	99.7	75.2	At1g01940	839309	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:cellular_component unknown;OBMFPA	O.I.	C.G.	H.G.
28.9	99.7	62.1	At1g68360	843165	zinc finger protein-related	F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO	O.I.	C.G.	H.G.
28.8	99.7	19.0	At5g10850	830952	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
28.3	99.7	80.9	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
28.3	99.7	6.4	At4g13985	827034	FBD1 (FBD-ASSOCIATED F-BOX PROTEIN)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.1	99.7	241.7	At2g39390	818524	60S ribosomal protein L35 (RPL35B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOBAFP	O.I.	C.G.	H.G.

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GSM ID	-
Assay name	E-ATMX-13-raw-cel-1556149823
GSE experiment	-

Microarray experiments to specifically-expressed genes

GSM ID - Assay name E-ATMX-13-raw-cel-1556149823 GSE experiment -

GSM ID -

Assay name E-ATMX-13-raw-cel-1556149823

GSE experiment -