Metabolic pathway to genes

Genes assigned in the pathway

Query pathway ID 03060
Pathway name Protein export
Organism Arabidopsis_thaliana
Database KEGG PATHWAY

Click Gene ID to show a list of co-expressed genes.

Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
At1g06870837198signal peptidase, putativeF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:membrane;BOMPFO.I.H.G.
At1g15310838100ATHSRP54A (ARABIDOPSIS THALIANA SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteinsO.I.H.G.
At1g21650838767ATP binding / protein bindingF:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast, membrane;OBPMO.I.H.G.
At1g24490839065ALB4 (ALBINA 4)Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.O.I.H.G.
At1g48160841235signal recognition particle 19 kDa protein, putative / SRP19, putativeF:7S RNA binding;P:protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;MFAOPO.I.H.G.
At1g48900841312signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C)F:7S RNA binding, mRNA binding, nucleoside-triphosphatase activity, GTP binding, nucleotide binding;P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;BOAMFPO.I.H.G.
At1g52600841692signal peptidase, putativeF:peptidase activity;P:proteolysis, signal peptide processing;C:endoplasmic reticulum, plasma membrane, membrane;MBFOAPO.I.H.G.
At1g676508430907S RNA bindingF:7S RNA binding;P:SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle;MFOBPAO.I.H.G.
At1g676808430937S RNA bindingF:7S RNA binding;P:SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle;MOFBPAO.I.H.G.
At2g01110814640APG2 (ALBINO AND PALE GREEN 2)mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.O.I.H.G.
At2g28800817429ALB3 (ALBINO 3)member of Chloroplast membrane protein ALBINO3 familyO.I.H.G.
At2g30440817595chloroplast thylakoidal processing peptidaseF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:membrane;BOMPFO.I.H.G.
At2g43640818966signal recognition particle 14 kDa family protein / SRP14 family proteinF:7S RNA binding, protein binding, endoplasmic reticulum signal peptide binding, RNA binding;P:negative regulation of translational elongation, protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;MFPOO.I.H.G.
At2g45770819185CPFTSYchloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.O.I.H.G.
At2g46470819256OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE)F:molecular_function unknown;P:protein import into mitochondrial inner membrane;C:mitochondrion, membrane;BOMFPO.I.H.G.
At3g15710820814signal peptidase, putativeF:peptidase activity;P:proteolysis, signal peptide processing;C:endoplasmic reticulum, plasma membrane, membrane;MFOBAPO.I.H.G.
At3g24590822055PLSP1 (plastidic type I signal peptidase 1)Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).O.I.H.G.
At3g49100824071signal recognition particle 9 kDa protein, putative / SRP9, putativeF:protein binding, 7S RNA binding, signal recognition particle binding;P:negative regulation of translational elongation, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle;MPOFO.I.H.G.
At4g01800827922preprotein translocase secA subunit, putativeF:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast stroma, chloroplast, chloroplast envelope;OBPMAO.I.H.G.
At4g30600829183signal recognition particle receptor alpha subunit family proteinF:in 6 functions;P:intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting;BOMFAPVO.I.H.G.
At5g03940830273CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)mutant has Yellow first leaves; Chloroplast Signal Recognition Particle SubunitO.I.H.G.
At5g28750832987thylakoid assembly protein, putativeF:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:protein secretion, protein transport;C:chloroplast thylakoid membrane, chloroplast envelope;BOPAO.I.H.G.
At5g49500835010signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B)F:7S RNA binding, mRNA binding, GTP binding;P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;BOAMFPO.I.H.G.
At5g61970836318signal recognition particle-related / SRP-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBAO.I.H.G.
At5g62050836325OXA1essential factor for protein sorting and assembly into membranesO.I.H.G.
At5g66970836831GTP bindingF:GTP binding;P:SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, endoplasmic reticulum targeting;BOAMFPO.I.H.G.

Comparison with co-expressed genes



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