CoP: Co-expressed Biological Processes

Metabolic pathway to genes

Genes assigned in the pathway

Query pathway ID 01100

Pathway name Metabolic pathways

Organism Arabidopsis_thaliana

Database KEGG PATHWAY

Click Gene ID to show a list of co-expressed genes.

Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
At1g01090 839429 PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA) pyruvate dehydrogenase E1 alpha subunit O.I. H.G.
At1g01210 839481 DNA-directed RNA polymerase III family protein F:in 6 functions;P:RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription;C:nucleus;MOFAP O.I. H.G.
At1g01460 839469 PIPK11 Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A. O.I. H.G.
At1g02000 839289 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2) UDP-D-glucuronate 4-epimerase O.I. H.G.
At1g02145 5007658 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:GPI anchor biosynthetic process;C:endomembrane system, intrinsic to endoplasmic reticulum membrane;MFPOB O.I. H.G.
At1g02410 839364 cytochrome c oxidase assembly protein CtaG / Cox11 family F:copper ion binding;P:biological_process unknown;C:unknown;OBFMP O.I. H.G.
At1g02790 839391 PGA4 (POLYGALACTURONASE 4) encodes a exopolygalacturonase. O.I. H.G.
At1g03130 838400 PSAD-2 (photosystem I subunit D-2) Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2) O.I. H.G.
At1g03475 839489 LIN2 (LESION INITIATION 2) Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection. O.I. H.G.
At1g03600 839449 photosystem II family protein F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast;BOP O.I. H.G.
At1g04410 839527 malate dehydrogenase, cytosolic, putative F:in 6 functions;P:response to cadmium ion, response to salt stress;C:in 7 components;BOMPFA O.I. H.G.
At1g04620 839472 coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family F:coenzyme F420 hydrogenase activity;P:biological_process unknown;C:chloroplast;BAOP O.I. H.G.
At1g04640 839462 LIP2 (LIPOYLTRANSFERASE 2) Lipoyltransferase, located in mitochondria but not found in chloroplasts O.I. H.G.
At1g04710 839434 PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4) EC2.3.1.16 thiolase. O.I. H.G.
At1g05260 837028 RCI3 (RARE COLD INDUCIBLE GENE 3) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. O.I. H.G.
At1g05590 837064 HEXO2 (BETA-HEXOSAMINIDASE 2) Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3. O.I. H.G.
At1g05610 837066 APS2 (ADP-glucose pyrophoshorylase small subunit 2) Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS2 is a minor small subunit isoform present in all plant tissues tested. O.I. H.G.
At1g06030 837112 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:unknown;BOPAMF O.I. H.G.
At1g06290 837140 ACX3 (ACYL-COA OXIDASE 3) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. O.I. H.G.
At1g06310 837141 ACX6 (ACYL-COA OXIDASE 6) Encodes a putative acyl-CoA oxidase. However, no transcripts have been detected for this gene and no altered phenotypes have been detected in plants mutant for this gene. This suggests that ACX6 does not significantly contribute to seedling beta-oxidation of fatty acids or indole-3-butyric acid in vivo. O.I. H.G.
At1g06570 837168 PDS1 (PHYTOENE DESATURATION 1) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants. O.I. H.G.
At1g06680 837178 PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. O.I. H.G.
At1g06820 837193 CRTISO (CAROTENOID ISOMERASE) Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene. O.I. H.G.
At1g07230 837234 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:unknown;C:endomembrane system;BFPOA O.I. H.G.
At1g07420 837254 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1) Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA O.I. H.G.
At1g07450 837257 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. H.G.
At1g07780 837292 PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family. O.I. H.G.
At1g07980 837313 NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10) F:transcription factor activity;P:regulation of transcription;C:intracellular, chloroplast;MFPO O.I. H.G.
At1g08200 837341 AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase. O.I. H.G.
At1g08260 837346 TIL1 (TILTED 1) Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. O.I. H.G.
At1g08490 837370 CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE) Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation. O.I. H.G.
At1g08510 837372 FATB (fatty acyl-ACP thioesterases B) Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer. O.I. H.G.
At1g08520 837374 CHLD F:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVA O.I. H.G.
At1g08550 837377 NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex O.I. H.G.
At1g08630 837385 THA1 (Threonine Aldolase 1) Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings. O.I. H.G.
At1g09420 837465 G6PD4 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4) Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally. O.I. H.G.
At1g09430 837466 ACLA-3 Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity. O.I. H.G.
At1g09780 837507 2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative F:manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding;P:response to cadmium ion, response to cold;C:cytosol, mitochondrial envelope, chloroplast, plasma membrane;BOPFAM O.I. H.G.
At1g09795 837509 ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2) ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis O.I. H.G.
At1g09815 837513 POLD4 (POLYMERASE DELTA 4) F:DNA-directed DNA polymerase activity;P:DNA replication;C:nucleus;FMPO O.I. H.G.
At1g09830 837515 phosphoribosylamine--glycine ligase (PUR2) glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide O.I. H.G.
At1g09940 837528 HEMA2 Encodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins O.I. H.G.
At1g10070 837543 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. O.I. H.G.
At1g10670 837610 ACLA-1 One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress. O.I. H.G.
At1g10900 837633 phosphatidylinositol-4-phosphate 5-kinase family protein F:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:plasma membrane;OMBPF O.I. H.G.
At1g11475 837690 NRPB10 Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB10. O.I. H.G.
At1g11590 837702 pectin methylesterase, putative F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOM O.I. H.G.
At1g11680 837712 CYP51G1 (CYTOCHROME P450 51G1) putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis. O.I. H.G.
At1g11860 837733 aminomethyltransferase, putative F:aminomethyltransferase activity;P:response to cadmium ion;C:in 6 components;OBMFAP O.I. H.G.
At1g11880 837736 transferase, transferring hexosyl groups F:transferase activity, transferring hexosyl groups;P:GPI anchor biosynthetic process;C:integral to membrane, endoplasmic reticulum membrane;MFBOPA O.I. H.G.
At1g12050 837757 fumarylacetoacetase, putative F:fumarylacetoacetase activity, catalytic activity;P:aromatic amino acid family metabolic process, metabolic process;C:cellular_component unknown;BOMFAP O.I. H.G.
At1g12230 837776 transaldolase, putative F:transaldolase activity, catalytic activity;P:glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, carbohydrate metabolic process, metabolic process, pentose-phosphate shunt, non-oxidative branch;C:chloroplast;BOFMPAV O.I. H.G.
At1g12240 837777 ATBETAFRUCT4 F:hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole, plant-type cell wall;BPFOMA O.I. H.G.
At1g12780 837834 UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1) Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress. O.I. H.G.
At1g12840 837840 DET3 (DE-ETIOLATED 3) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8. O.I. H.G.
At1g12900 837848 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) F:NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, binding, glyceraldehyde-3-phosphate dehydrogenase activity, catalytic activity;P:glycolysis, glucose metabolic process, metabolic process;C:apoplast, chloroplast stroma, chloroplast, membrane, chloroplast envelope;BOPFMA O.I. H.G.
At1g13280 837888 AOC4 (ALLENE OXIDE CYCLASE 4) Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway. O.I. H.G.
At1g13440 837904 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2) F:NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, binding, catalytic activity, glyceraldehyde-3-phosphate dehydrogenase activity;P:response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis;C:in 8 components;BOPFMA O.I. H.G.
At1g13560 837917 AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1) Encodes aminoalcoholphosphotransferase AAPT1. O.I. H.G.
At1g13700 837931 glucosamine/galactosamine-6-phosphate isomerase family protein F:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:cellular_component unknown;BOFMP O.I. H.G.
At1g14150 837974 oxygen evolving enhancer 3 (PsbQ) family protein F:calcium ion binding;P:photosynthesis;C:chloroplast thylakoid membrane, chloroplast photosystem II, chloroplast thylakoid lumen, chloroplast;P O.I. H.G.
At1g14540 838016 anionic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. H.G.
At1g14550 838017 anionic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. H.G.
At1g14810 838046 semialdehyde dehydrogenase family protein encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis O.I. H.G.
At1g15110 838074 phosphatidyl serine synthase family protein F:CDP-diacylglycerol-serine O-phosphatidyltransferase activity;P:phosphatidylserine biosynthetic process;C:cellular_component unknown;MOPF O.I. H.G.
At1g15120 838075 ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III;MPOF O.I. H.G.
At1g15700 838139 ATPC2 One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity. O.I. H.G.
At1g15820 838151 LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6) Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II. O.I. H.G.
At1g15950 838165 CCR1 (CINNAMOYL COA REDUCTASE 1) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis. O.I. H.G.
At1g16300 838199 GAPCP-2 F:NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, binding, catalytic activity, glyceraldehyde-3-phosphate dehydrogenase activity;P:glycolysis, glucose metabolic process, metabolic process;C:plastid;BOPFMA O.I. H.G.
At1g16340 838203 ATKDSA2 Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500). O.I. H.G.
At1g16350 838204 inosine-5'-monophosphate dehydrogenase, putative F:IMP dehydrogenase activity, catalytic activity;P:GMP biosynthetic process, metabolic process;C:cellular_component unknown;OBMFAPV O.I. H.G.
At1g16570 838227 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:mitochondrion;BMOFPA O.I. H.G.
At1g16700 838239 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative F:NADH dehydrogenase (ubiquinone) activity, metal ion binding;P:unknown;C:mitochondrion, respiratory chain complex I;BOAPMF O.I. H.G.
At1g16900 838261 sugar binding / transferase, transferring glycosyl groups curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein O.I. H.G.
At1g17290 838301 AlaAT1 (ALANINE AMINOTRANSFERAS) Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia O.I. H.G.
At1g17420 838314 LOX3 Lipoxygenase O.I. H.G.
At1g17745 838352 PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE) encodes a 3-Phosphoglycerate dehydrogenase O.I. H.G.
At1g17890 838368 GER2 F:coenzyme binding, binding, catalytic activity;P:GDP-L-fucose biosynthetic process, cellular metabolic process, metabolic process;C:cellular_component unknown;BOPMAFV O.I. H.G.
At1g18270 838407 ketose-bisphosphate aldolase class-II family protein F:in 8 functions;P:pentose-phosphate shunt, valine metabolic process, glycolysis, metabolic process;C:nucleus;BOFMPA O.I. H.G.
At1g18500 838431 MAML-4 (METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4) Encodes an active Arabidopsis isopropylmalate synthase IPMS1. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS1 can be compensated by a second isopropylmalate synthase gene IPMS2 (At1g74040). O.I. H.G.
At1g18640 838445 - - O.I. H.G.
At1g18870 838468 ICS2 (ISOCHORISMATE SYNTHASE 2) Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410). O.I. H.G.
At1g19910 838579 AVA-P2 vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) O.I. H.G.
At1g20020 838591 FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2) Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma O.I. H.G.
At1g20050 838593 HYD1 (HYDRA1) C-8 sterol isomerase O.I. H.G.
At1g20480 838636 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, metabolic process;C:cellular_component unknown;BOFMPAV O.I. H.G.
At1g20510 838639 OPCL1 (OPC-8:0 COA LIGASE1) F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV O.I. H.G.
At1g20575 838646 dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative F:elongation factor-2 kinase activity, dolichyl-phosphate beta-D-mannosyltransferase activity;P:protein amino acid glycosylation;C:endoplasmic reticulum;BOAMFPV O.I. H.G.
At1g20620 838651 CAT3 (CATALASE 3) Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen. O.I. H.G.
At1g20630 838652 CAT1 (CATALASE 1) Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2. O.I. H.G.
At1g21400 838739 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPA O.I. H.G.
At1g21980 838801 ATPIP5K1 (PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1) Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. O.I. H.G.
At1g22020 838807 SHM6 (serine hydroxymethyltransferase 6) Encodes a putative serine hydroxymethyltransferase. O.I. H.G.
At1g22410 838847 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative F:3-deoxy-7-phosphoheptulonate synthase activity;P:aromatic amino acid family biosynthetic process;C:membrane;OBPF O.I. H.G.
At1g22430 838849 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. H.G.
At1g22440 838850 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. H.G.
At1g22450 838851 COX6B (CYTOCHROME C OXIDASE 6B) subunit 6b of cytochrome c oxidase O.I. H.G.
At1g22940 838901 TH1 (THIAMINE REQUIRING 1) Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media. O.I. H.G.
At1g23190 838927 phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative F:intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity;P:response to cadmium ion, carbohydrate metabolic process;C:cytosol, nucleus, plasma membrane, chloroplast, cytoplasm;BOMFPA O.I. H.G.
At1g23310 838940 GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE) Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. O.I. H.G.
At1g23360 838945 UbiE/COQ5 methyltransferase family protein F:methyltransferase activity;P:unknown;C:chloroplast;BOAFMP O.I. H.G.
At1g23800 838991 ALDH2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. O.I. H.G.
At1g23820 838993 SPDS1 (spermidine synthase 1) Spermidine synthase. O.I. H.G.
At1g24110 839023 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. H.G.
At1g24180 839031 IAR4 Arabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900 O.I. H.G.
At1g24280 839044 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. O.I. H.G.
At1g24320 839048 alpha-glucosidase, putative F:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPA O.I. H.G.
At1g24360 839053 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase F:3-oxoacyl-[acyl-carrier-protein] reductase activity;P:metabolic process, fatty acid biosynthetic process;C:chloroplast stroma, chloroplast, chloroplast envelope;BOMFPAV O.I. H.G.
At1g24735 839082 O-methyltransferase F:O-methyltransferase activity;P:unknown;C:cytosol;BOPMFA O.I. H.G.
At1g24807 839085 anthranilate synthase beta subunit, putative F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMP O.I. H.G.
At1g24909 839089 anthranilate synthase beta subunit, putative F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:unknown;BOFAMP O.I. H.G.
At1g25220 839103 ASB1 (ANTHRANILATE SYNTHASE BETA SUBUNIT 1) Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2). O.I. H.G.
At1g25350 839120 OVA9 (ovule abortion 9) F:glutamine-tRNA ligase activity;P:glutamyl-tRNA aminoacylation, translation, ovule development;C:cytosol;BOMFAP O.I. H.G.
At1g25410 839127 ATIPT6 AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cds O.I. H.G.
At1g26570 839197 UGD1 (UDP-GLUCOSE DEHYDROGENASE 1) F:in 7 functions;P:metabolic process;C:endomembrane system;OBAMPFV O.I. H.G.
At1g27450 839636 APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1) Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP. O.I. H.G.
At1g27680 839660 APL2 (ADPGLC-PPASE LARGE SUBUNIT) ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. O.I. H.G.
At1g27980 839691 DPL1 F:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity;P:amino acid metabolic process, sphingolipid catabolic process;C:endoplasmic reticulum, membrane;BOFMPAV O.I. H.G.
At1g29410 839817 PAI3 (phosphoribosylanthranilate isomerase 3) Encodes phosphoribosylanthranilate isomerase which catalyzes the third step in tryptophan biosynthesis. O.I. H.G.
At1g29900 839868 CARB (CARBAMOYL PHOSPHATE SYNTHETASE B) carbamoyl phosphate synthetase large chain (CARB) mRNA, O.I. H.G.
At1g29920 839870 CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2) Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II. O.I. H.G.
At1g29930 839871 CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1) Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. O.I. H.G.
At1g29940 839872 NRPA2 Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). O.I. H.G.
At1g30000 839879 glycoside hydrolase family 47 protein F:mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, alpha-mannosidase activity, calcium ion binding;P:protein amino acid N-linked glycosylation;C:Golgi apparatus;MFOPB O.I. H.G.
At1g30100 839889 NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. O.I. H.G.
At1g30120 839891 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA) Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit. O.I. H.G.
At1g30380 839918 PSAK (photosystem I subunit K) Encodes subunit K of photosystem I reaction center. O.I. H.G.
At1g30510 839930 ATRFNR2 (ROOT FNR 2) Encodes a root-type ferredoxin:NADP(H) oxidoreductase. O.I. H.G.
At1g30530 839933 UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1) The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin O.I. H.G.
At1g30620 839942 MUR4 (MURUS 4) encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans. O.I. H.G.
At1g30820 839964 CTP synthase, putative / UTP--ammonia ligase, putative F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:unknown;OBMFAP O.I. H.G.
At1g30870 839971 cationic peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOM O.I. H.G.
At1g31070 839993 UDP-N-acetylglucosamine pyrophosphorylase-related F:nucleotidyltransferase activity;P:peptidoglycan biosynthetic process, metabolic process, UDP-N-acetylgalactosamine biosynthetic process;C:plasma membrane;MBFPO O.I. H.G.
At1g31180 840006 3-isopropylmalate dehydrogenase, chloroplast, putative The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. O.I. H.G.
At1g31220 840010 phosphoribosylglycinamide formyltransferase N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide O.I. H.G.
At1g31230 840011 AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I) Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. O.I. H.G.
At1g31330 840021 PSAF (photosystem I subunit F) Encodes subunit F of photosystem I. O.I. H.G.
At1g31860 840076 AT-IE encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities. O.I. H.G.
At1g31910 840081 GHMP kinase family protein F:kinase activity, ATP binding;P:phosphorylation;C:unknown;FPOBA O.I. H.G.
At1g32060 840098 PRK (PHOSPHORIBULOKINASE) F:protein binding, phosphoribulokinase activity, ATP binding;P:response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation, biosynthetic process;C:in 8 components;BPOMFAV O.I. H.G.
At1g32210 840113 ATDAD1 (DEFENDER AGAINST APOPTOTIC DEATH 1) Encodes protein involved in suppression of apoptosis. Complements a mammalian apoptosis suppressor mutation. O.I. H.G.
At1g32380 840131 ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2) F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;OBMFAPV O.I. H.G.
At1g32440 840138 PKp3 (plastidial pyruvate kinase 3) encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant. O.I. H.G.
At1g32480 840142 oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor F:oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:metabolic process;C:unknown;BOMFAP O.I. H.G.
At1g32710 840165 cytochrome c oxidase subunit VIb family F:cytochrome-c oxidase activity;P:unknown;C:mitochondrion;MPFO O.I. H.G.
At1g32780 840172 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV O.I. H.G.
At1g34130 840312 STT3B (staurosporin and temperature sensitive 3-like b) Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase. O.I. H.G.
At1g34430 840346 EMB3003 (embryo defective 3003) F:dihydrolipoyllysine-residue acetyltransferase activity, protein binding, acyltransferase activity;P:embryonic development ending in seed dormancy;C:cytosolic ribosome, plasma membrane, chloroplast, chloroplast envelope;OBMFPA O.I. H.G.
At1g34510 840353 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO O.I. H.G.
At1g36160 840521 ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation. O.I. H.G.
At1g36280 840534 adenylosuccinate lyase, putative / adenylosuccinase, putative F:N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, catalytic activity;P:purine ribonucleotide biosynthetic process, purine base biosynthetic process, IMP biosynthetic process;C:chloroplast;BOMFAP O.I. H.G.
At1g36370 840543 SHM7 (serine hydroxymethyltransferase 7) Encodes a putative serine hydroxymethyltransferase. O.I. H.G.
At1g42970 840895 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT) Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase. O.I. H.G.
At1g43670 840953 fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative F:fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity;P:carbohydrate metabolic process, fructose metabolic process;C:cellular_component unknown;BOMPFA O.I. H.G.
At1g43710 840958 emb1075 (embryo defective 1075) F:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity;P:embryonic development ending in seed dormancy, amino acid metabolic process;C:cellular_component unknown;BMOFAPV O.I. H.G.
At1g44180 841021 aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative F:metallopeptidase activity, aminoacylase activity;P:amino acid metabolic process, proteolysis;C:endomembrane system, cytoplasm;BOMFAPV O.I. H.G.
At1g44318 841025 hemb2 F:porphobilinogen synthase activity, catalytic activity, metal ion binding;P:porphyrin biosynthetic process;C:unknown;OBMFAP O.I. H.G.
At1g44575 841033 NPQ4 (NONPHOTOCHEMICAL QUENCHING) Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation. O.I. H.G.
At1g44820 841046 aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative F:metallopeptidase activity, aminoacylase activity;P:amino acid metabolic process, proteolysis;C:endomembrane system, cytoplasm;BOMFAPV O.I. H.G.
At1g44970 841062 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. H.G.
At1g47840 841200 HXK3 (HEXOKINASE 3) Encodes a putative hexokinase. O.I. H.G.
At1g48030 841221 mtLPD1 (mitochondrial lipoamide dehydrogenase 1) Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light. O.I. H.G.
At1g48140 841232 dolichol-phosphate mannosyltransferase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPF O.I. H.G.
At1g48470 841268 GLN1 Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots. O.I. H.G.
At1g48520 841273 GATB (GLU-ADT SUBUNIT B) Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836). O.I. H.G.
At1g48850 841307 EMB1144 (embryo defective 1144) F:chorismate synthase activity;P:embryonic development ending in seed dormancy, aromatic amino acid family biosynthetic process;C:nucleolus, chloroplast;OBAFPM O.I. H.G.
At1g48860 841308 3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative F:3-phosphoshikimate 1-carboxyvinyltransferase activity, catalytic activity, transferase activity, transferring alkyl or aryl (other than methyl) groups;P:glyphosate metabolic process, aromatic amino acid family biosynthetic process;C:chloroplast;BOPAFM O.I. H.G.
At1g49140 841337 NADH-ubiquinone oxidoreductase-related F:unknown;P:photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I;FPM O.I. H.G.
At1g49340 841357 ATPI4K ALPHA Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots. O.I. H.G.
At1g49430 841367 LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2) Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation. O.I. H.G.
At1g49530 841377 GGPS6 (geranylgeranyl pyrophosphate synthase 6) encodes a mitochondria-targeted geranylgeranyl pyrophosphate synthase O.I. H.G.
At1g49570 841381 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. H.G.
At1g50090 841432 aminotransferase class IV family protein F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA O.I. H.G.
At1g50110 841433 branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA O.I. H.G.
At1g50430 841465 DWF5 (DWARF 5) Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype. O.I. H.G.
At1g50480 841470 THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE) 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete O.I. H.G.
At1g51650 841590 ATP synthase epsilon chain, mitochondrial F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP biosynthetic process, ATP synthesis coupled proton transport;C:mitochondrion;MPOF O.I. H.G.
At1g51680 841593 4CL1 (4-COUMARATE:COA LIGASE 1) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate. O.I. H.G.
At1g51720 841597 glutamate dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:amino acid metabolic process, metabolic process;C:cellular_component unknown;BOMPAF O.I. H.G.
At1g52230 841653 PSAH2 (PHOTOSYSTEM I SUBUNIT H2) F:molecular_function unknown;P:photosynthesis;C:in 6 components;PO O.I. H.G.
At1g52340 841665 ABA2 (ABA DEFICIENT 2) Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. O.I. H.G.
At1g53000 841733 cytidylyltransferase family F:3-deoxy-manno-octulosonate cytidylyltransferase activity, nucleotidyltransferase activity;P:lipopolysaccharide biosynthetic process;C:mitochondrion, plastid;OBPAM O.I. H.G.
At1g53030 841736 cytochrome c oxidase copper chaperone family protein encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots. O.I. H.G.
At1g53240 841757 malate dehydrogenase (NAD), mitochondrial F:malate dehydrogenase activity;P:response to cadmium ion, response to salt stress, response to cold, defense response to bacterium, peptidyl-cysteine S-nitrosylation;C:mitochondrion, cell wall, chloroplast;BOMPFA O.I. H.G.
At1g53310 841765 ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1) Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins. O.I. H.G.
At1g53830 841820 ATPME2 encodes a pectin methylesterase O.I. H.G.
At1g54100 841849 ALDH7B4 (Aldehyde Dehydrogenase 7B4) Aldehyde dehydrogenase O.I. H.G.
At1g54220 841863 dihydrolipoamide S-acetyltransferase, putative F:dihydrolipoyllysine-residue acetyltransferase activity, protein binding, acyltransferase activity;P:pyruvate metabolic process, metabolic process, acetyl-CoA biosynthetic process from pyruvate;C:mitochondrion;OBMFPA O.I. H.G.
At1g54250 841866 NRPB8A One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600. O.I. H.G.
At1g54340 841875 ICDH (ISOCITRATE DEHYDROGENASE) NADP-specific isocitrate dehydrogenase (ICDH) O.I. H.G.
At1g55020 841944 LOX1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris O.I. H.G.
At1g55090 841952 carbon-nitrogen hydrolase family protein F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, NAD+ synthase (glutamine-hydrolyzing) activity, ATP binding;P:nitrogen compound metabolic process, NAD biosynthetic process;C:cellular_component unknown;BOAMFP O.I. H.G.
At1g55180 841961 PLDEPSILON (PHOSPHOLIPASE D ALPHA 4) member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties. O.I. H.G.
At1g55510 841998 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT) branched-chain alpha-keto acid decarboxylase E1 beta O.I. H.G.
At1g55570 842006 sks12 (SKU5 Similar 12) F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. H.G.
At1g55670 842016 PSAG (PHOTOSYSTEM I SUBUNIT G) Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin. O.I. H.G.
At1g55880 842038 pyridoxal-5'-phosphate-dependent enzyme, beta family protein F:lyase activity, pyridoxal phosphate binding, catalytic activity;P:amino acid metabolic process, cysteine biosynthetic process from serine, metabolic process;C:unknown;BOFMPA O.I. H.G.
At1g55920 842043 ATSERAT2 Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. O.I. H.G.
At1g56190 842072 phosphoglycerate kinase, putative F:phosphoglycerate kinase activity;P:response to cadmium ion, glycolysis;C:thylakoid, mitochondrion, chloroplast stroma, chloroplast, membrane;OBPMAF O.I. H.G.
At1g58290 842198 HEMA1 Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis. O.I. H.G.
At1g58440 842213 XF1 Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. O.I. H.G.
At1g59900 842284 AT-E1 ALPHA encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC) O.I. H.G.
At1g60490 842344 ATVPS34 Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of celluar processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. O.I. H.G.
At1g60550 842350 ECHID (ENOYL-COA HYDRATASE/ISOMERASE D) F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPA O.I. H.G.
At1g60600 842354 ABC4 (ABERRANT CHLOROPLAST DEVELOPMENT 4) Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport. O.I. H.G.
At1g60810 842375 ACLA-2 One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase O.I. H.G.
At1g60890 842381 phosphatidylinositol-4-phosphate 5-kinase family protein F:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:plasma membrane;OMBPF O.I. H.G.
At1g61280 842422 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. H.G.
At1g61700 842467 DNA-directed RNA polymerase II, putative (RPB10) Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10. O.I. H.G.
At1g62430 842541 ATCDS1 Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis. O.I. H.G.
At1g62640 842561 KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III) 3-ketoacyl-acyl carrier protein synthase III (KAS III) O.I. H.G.
At1g62660 842563 beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole;BPFOMA O.I. H.G.
At1g62800 842579 ASP4 (ASPARTATE AMINOTRANSFERASE 4) Encodes aspartate aminotransferase (Asp4). O.I. H.G.
At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. O.I. H.G.
At1g63180 842622 UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3) Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development. O.I. H.G.
At1g63290 842635 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative F:ribulose-phosphate 3-epimerase activity, catalytic activity;P:carbohydrate metabolic process, metabolic process;C:plasma membrane;OBMFPA O.I. H.G.
At1g63380 842644 binding / catalytic/ oxidoreductase F:oxidoreductase activity, binding, catalytic activity;P:metabolic process, non-phosphorylated glucose catabolic process;C:cellular_component unknown;BOMFPAV O.I. H.G.
At1g63660 842670 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative F:catalytic activity, GMP synthase (glutamine-hydrolyzing) activity, ATP binding;P:in 6 processes;C:unknown;OBAFMP O.I. H.G.
At1g63970 842700 ISPF Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF O.I. H.G.
At1g64190 842724 6-phosphogluconate dehydrogenase family protein F:in 6 functions;P:response to salt stress;C:chloroplast, membrane;BOMPFAV O.I. H.G.
At1g64200 842725 VHA-E3 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3) F:proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole, mitochondrial proton-transporting ATP synthase complex;MOFPAB O.I. H.G.
At1g64400 842748 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative F:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAV O.I. H.G.
At1g64440 842752 RHD1 (ROOT HAIR DEFECTIVE 1) Encodes a protein with UDP-D-glucose 4-epimerase activity. Mutants in RHD1 have abnormally shaped root hairs with a bulbous region at the base. Allelic to REB1 encoding a UDP-D-glucose 4-epimerase involved in cell wall biosynthesis.Involved in growth and cell wall carbohydrate biosynthesis. O.I. H.G.
At1g64710 842779 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV O.I. H.G.
At1g64970 842805 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves O.I. H.G.
At1g65060 842814 4CL3 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate. O.I. H.G.
At1g65290 842836 mtACP2 (mitochondrial acyl carrier protein 2) Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. O.I. H.G.
At1g65590 842871 HEXO3 (BETA-HEXOSAMINIDASE 3) Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane. O.I. H.G.
At1g65930 842905 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative F:isocitrate dehydrogenase (NADP+) activity, copper ion binding;P:response to cadmium ion, response to salt stress, metabolic process;C:apoplast, plasma membrane;OBMPFA O.I. H.G.
At1g66430 842961 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:chloroplast, chloroplast stroma;BOPAMF O.I. H.G.
At1g67070 843027 DIN9 (DARK INDUCIBLE 9) Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. H.G.
At1g67090 843029 RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A) F:ribulose-bisphosphate carboxylase activity, copper ion binding;P:response to blue light, response to cold, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 10 components;POB O.I. H.G.
At1g67110 843031 CYP735A2 member of CYP709A O.I. H.G.
At1g67320 843052 DNA primase, large subunit family F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA O.I. H.G.
At1g67500 843071 ATREV3 (ARABIDOPSIS THALIANA RECOVERY PROTEIN 3) Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). O.I. H.G.
At1g67560 843077 lipoxygenase family protein F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth;C:chloroplast;PMBFO O.I. H.G.
At1g67630 843086 POLA2 (DNA POLYMERASE ALPHA 2) F:DNA binding, DNA-directed DNA polymerase activity;P:DNA replication;C:mitochondrion;MFOP O.I. H.G.
At1g67740 843099 PSBY PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood. O.I. H.G.
At1g68000 843128 ATPIS1 (PHOSPHATIDYLINOSITOL SYNTHASE 1) phosphatidylinositol synthase 1 O.I. H.G.
At1g68460 843175 ATIPT1 (isopentenyltransferase 1) Encodes a putative adenylate isopentenyltransferase which catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP). Involved in cytokinin biosynthesis. O.I. H.G.
At1g68750 843206 ATPPC4 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins. O.I. H.G.
At1g68850 843218 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. H.G.
At1g69370 843269 CM3 (chorismate mutase 3) Encodes chorismate mutase 3 (CM3). O.I. H.G.
At1g69740 843310 HEMB1 Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis. O.I. H.G.
At1g69770 843313 CMT3 (chromomethylase 3) Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. O.I. H.G.
At1g70310 843367 SPDS2 (spermidine synthase 2) Spermidine synthase. O.I. H.G.
At1g70580 843395 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) Similar to glutamate-glyoxylate transaminase enzyme encoded by AOAT1 O.I. H.G.
At1g70730 843410 phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative F:intramolecular transferase activity, phosphotransferases, magnesium ion binding, phosphoglucomutase activity;P:response to cadmium ion, carbohydrate metabolic process;C:cytosol, nucleus, plasma membrane;BOMFPA O.I. H.G.
At1g71010 843440 phosphatidylinositol-4-phosphate 5-kinase family protein F:1-phosphatidylinositol-4-phosphate 5-kinase activity, protein binding, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process, cellular protein metabolic process;C:cellular_component unknown;MOFPAB O.I. H.G.
At1g71100 843450 RSW10 (RADIAL SWELLING 10) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis. O.I. H.G.
At1g71695 843498 peroxidase 12 (PER12) (P12) (PRXR6) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane, plant-type cell wall;PFOB O.I. H.G.
At1g71750 843505 phosphoribosyltransferase family protein F:transferase activity, hypoxanthine phosphoribosyltransferase activity;P:nucleoside metabolic process, purine ribonucleoside salvage;C:cytoplasm;BOMAPF O.I. H.G.
At1g71920 843523 histidinol-phosphate aminotransferase, putative F:transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, histidinol-phosphate transaminase activity, catalytic activity;P:biosynthetic process, histidine biosynthetic process;C:chloroplast;BOAPFM O.I. H.G.
At1g72520 843584 lipoxygenase, putative F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth, jasmonic acid biosynthetic process, response to wounding, defense response;C:chloroplast;PMBFO O.I. H.G.
At1g72810 843612 threonine synthase, putative F:pyridoxal phosphate binding, catalytic activity, threonine synthase activity;P:amino acid metabolic process, threonine biosynthetic process, metabolic process;C:chloroplast;BOAMPF O.I. H.G.
At1g72880 843619 acid phosphatase survival protein SurE, putative F:hydrolase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;BOAPF O.I. H.G.
At1g72990 843630 BGAL17 (beta-galactosidase 17) F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:mitochondrion, beta-galactosidase complex;MPBFOA O.I. H.G.
At1g73050 843636 (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative F:oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cyanide biosynthetic process, defense response;C:endomembrane system;OBFMPVA O.I. H.G.
At1g73250 843659 GER1 (GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1) encodes a bifunctional 3, 5-epimerase-4-reductase in L-fucose synthesis and converts GDP-D-mannose to GDP-L-fucose in vitro along with MUR1 (GDP-D-mannose 4,6-dehydratase). It is expressed in all tissues examined, but most abundantly in roots and flowers. O.I. H.G.
At1g73740 843709 glycosyl transferase family 28 protein F:transferase activity, transferring glycosyl groups;P:lipid glycosylation, biosynthetic process, carbohydrate metabolic process;C:chloroplast;BOPMF O.I. H.G.
At1g74000 843738 SS3 (STRICTOSIDINE SYNTHASE 3) encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis. O.I. H.G.
At1g74010 843739 strictosidine synthase family protein F:strictosidine synthase activity;P:biosynthetic process;C:plant-type cell wall;PMBOA O.I. H.G.
At1g74020 843740 SS2 (STRICTOSIDINE SYNTHASE 2) Encodes AtSS-2 strictosidine synthase. O.I. H.G.
At1g74030 843741 enolase, putative F:phosphopyruvate hydratase activity;P:in 12 processes;C:phosphopyruvate hydratase complex, chloroplast;OBMFAP O.I. H.G.
At1g74040 843742 IMS1 (2-ISOPROPYLMALATE SYNTHASE 1) Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500). O.I. H.G.
At1g74260 843766 PUR4 (purine biosynthesis 4) Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development. O.I. H.G.
At1g74340 843775 dolichol phosphate-mannose biosynthesis regulatory protein-related F:molecular_function unknown;P:macromolecule biosynthetic process;C:integral to endoplasmic reticulum membrane, endomembrane system;MFOP O.I. H.G.
At1g74470 843788 geranylgeranyl reductase Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. O.I. H.G.
At1g74540 843795 CYP98A8 member of CYP98A O.I. H.G.
At1g74550 843796 CYP98A9 member of CYP98A O.I. H.G.
At1g74710 843810 isochorismate synthase 1 (ICS1) / isochorismate mutase Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870). O.I. H.G.
At1g74960 843835 FAB1 (FATTY ACID BIOSYNTHESIS 1) Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. O.I. H.G.
At1g75330 843869 OTC (ORNITHINE CARBAMOYLTRANSFERASE) F:amino acid binding, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity;P:amino acid metabolic process;C:chloroplast, chloroplast stroma;BOAFMPV O.I. H.G.
At1g75630 843898 AVA-P4 vacuolar H+-pumping ATPase 16 kD proteolipid (ava-p) mRNA, O.I. H.G.
At1g76030 843934 vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit / V-ATPase 57 kDa subunit Encodes the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus. O.I. H.G.
At1g76400 843972 ribophorin I family protein F:oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity;P:protein amino acid glycosylation;C:endoplasmic reticulum, membrane;MFOPA O.I. H.G.
At1g76490 843982 HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1) Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine O.I. H.G.
At1g76680 844001 OPR1 Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. O.I. H.G.
At1g76690 844002 OPR2 Encodes one of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. O.I. H.G.
At1g76730 844007 5-formyltetrahydrofolate cyclo-ligase family protein F:catalytic activity, ATP binding, 5-formyltetrahydrofolate cyclo-ligase activity;P:folic acid and derivative biosynthetic process, metabolic process;C:chloroplast;MBAOPF O.I. H.G.
At1g77120 844047 ADH1 (ALCOHOL DEHYDROGENASE 1) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. O.I. H.G.
At1g77590 844094 LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids. O.I. H.G.
At1g77740 844110 1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative F:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:cellular_component unknown;OMBPF O.I. H.G.
At1g78390 844175 NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9) Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. O.I. H.G.
At1g78650 844201 POLD3 Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication. O.I. H.G.
At1g78800 844216 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:cellular_component unknown;BOAPMF O.I. H.G.
At1g78900 844228 VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. O.I. H.G.
At1g78960 844236 ATLUP2 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. O.I. H.G.
At1g79010 844242 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) F:NADH dehydrogenase (ubiquinone) activity, metal ion binding;P:unknown;C:mitochondrion, respiratory chain complex I;BOAPMF O.I. H.G.
At1g79040 844245 PSBR (photosystem II subunit R) Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ. O.I. H.G.
At1g79440 844282 ALDH5F1 Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004). O.I. H.G.
At1g79460 844284 GA2 (GA REQUIRING 2) Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway. O.I. H.G.
At1g79470 844285 inosine-5'-monophosphate dehydrogenase F:IMP dehydrogenase activity, catalytic activity;P:GMP biosynthetic process, metabolic process;C:unknown;OBMFAPV O.I. H.G.
At1g79530 844291 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) F:NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, binding, catalytic activity, glyceraldehyde-3-phosphate dehydrogenase activity;P:glycolysis, glucose metabolic process, metabolic process;C:plastid, membrane;BOPFMA O.I. H.G.
At1g79550 844293 PGK (PHOSPHOGLYCERATE KINASE) Encodes cytosolic phosphoglycerate kinase (PGK). O.I. H.G.
At1g79750 844314 ATNADP-ME4 (NADP-malic enzyme 4) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed. O.I. H.G.
At1g80050 844345 APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol. O.I. H.G.
At1g80230 844363 cytochrome c oxidase family protein F:cytochrome-c oxidase activity;P:unknown;C:mitochondrial envelope, mitochondrion;MFPO O.I. H.G.
At1g80460 844385 NHO1 (nonhost resistance to P. s. phaseolicola 1) Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1. O.I. H.G.
At1g80560 844395 3-isopropylmalate dehydrogenase, chloroplast, putative The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. O.I. H.G.
At1g80600 844399 WIN1 (HOPW1-1-INTERACTING 1) Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). O.I. H.G.
At1g80740 844413 CMT1 (CHROMOMETHYLASE 1) ecotype Kl-0 chromomethylase (CMT1). A plant line expressing an RNAi construct directed against DMT4 has reduced agrobacterium-mediated tumor formation. O.I. H.G.
At1g80820 844421 CCR2 (CINNAMOYL COA REDUCTASE) Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis. O.I. H.G.
At2g01090 814638 ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrial respiratory chain complex III;POMF O.I. H.G.
At2g01140 814643 fructose-bisphosphate aldolase, putative F:fructose-bisphosphate aldolase activity;P:response to oxidative stress, response to cadmium ion, pentose-phosphate shunt;C:mitochondrion, chloroplast, plastoglobule;OMBPF O.I. H.G.
At2g01290 814657 ribose-5-phosphate isomerase F:ribose-5-phosphate isomerase activity;P:glucose catabolic process to lactate and acetate, 5-phosphoribose 1-diphosphate biosynthetic process, reductive pentose-phosphate cycle, D-ribose catabolic process, pentose-phosphate shunt, non-oxidative branch;C:cytoplasm;BOAFMP O.I. H.G.
At2g01350 814663 QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli. O.I. H.G.
At2g02000 814731 GAD3 (glutamate decarboxylase 3) F:calmodulin binding;P:carboxylic acid metabolic process, glutamate metabolic process, glutamate decarboxylation to succinate;C:cellular_component unknown;BFPOMAV O.I. H.G.
At2g02050 814736 NADH-ubiquinone oxidoreductase B18 subunit, putative F:NADH dehydrogenase activity, NADH dehydrogenase (ubiquinone) activity;P:mitochondrial electron transport, NADH to ubiquinone, photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I;MFPO O.I. H.G.
At2g02500 814779 ISPD Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity). O.I. H.G.
At2g03220 814851 FT1 (FUCOSYLTRANSFERASE 1) member of Glycosyltransferase Family- 37 O.I. H.G.
At2g04400 814980 indole-3-glycerol phosphate synthase (IGPS) F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP O.I. H.G.
At2g04540 814996 3-oxoacyl-(acyl-carrier-protein) synthase II, putative F:transferase activity, transferring acyl groups other than amino-acyl groups, fatty-acid synthase activity, catalytic activity;P:biosynthetic process, fatty acid biosynthetic process, metabolic process;C:mitochondrion;BOFMPA O.I. H.G.
At2g04630 815006 NRPB6B One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At5g51940. O.I. H.G.
At2g05070 815055 LHCB2.2 Encodes Lhcb2.2. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. O.I. H.G.
At2g05100 815058 LHCB2.1 Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1. O.I. H.G.
At2g05710 815120 aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. O.I. H.G.