Biological process to genes

Query process ID GO:0051707
Process name A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g19250838508FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)FMO1 is required for full expression of TIR-NB-LRR–conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.O.I.H.G.
XAt1g33560840250ADR1 (ACTIVATED DISEASE RESISTANCE 1)Encodes a NBS-LRR disease resistance protein that possesses N-terminal kinase subdomains. Activation tagged mutant of ADR1 showed elevated levels of SA and reactive oxygen species in addition to number of defense gene transcripts. Exhibits resistance to number of microbial pathogens.O.I.H.G.
XAt1g70690843406HWI1 (HOPW1-1-INDUCED GENE1)Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.O.I.H.G.
XAt2g04450814985ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6)F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFVO.I.H.G.
XAt2g15480816040UGT73B5 (UDP-glucosyl transferase 73B5)F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:endomembrane system;PMVBOFO.I.H.G.
XAt2g15490816041UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:endomembrane system;PMVBOFO.I.H.G.
XAt2g30110817562ATUBA1Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.O.I.H.G.
XAt3g11480820321BSMT1The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.O.I.H.G.
XAt3g13100820498ATMRP7member of MRP subfamilyO.I.H.G.
XAt3g16770820929ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.O.I.H.G.
XAt3g52430824408PAD4 (PHYTOALEXIN DEFICIENT 4)Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling.O.I.H.G.
XAt3g53160824482UGT73C7 (UDP-glucosyl transferase 73C7)F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:cellular_component unknown;PMBVOFO.I.H.G.
XAt3g54950824660PLA IIIA (PATATIN-LIKE PROTEIN 6)F:unknown;P:response to other organism;C:unknown;PBOFMO.I.H.G.
XAt4g34131829559UGT73B3 (UDP-glucosyl transferase 73B3)F:quercetin 3-O-glucosyltransferase activity, transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:response to cyclopentenone, response to other organism;C:endomembrane system;PMBVOFO.I.H.G.
XAt4g34135829560UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2)The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.O.I.H.G.
XAt4g36430829795peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to other organism;C:cell wall;PFOBMO.I.H.G.
XAt5g24540832525BGLU31 (BETA GLUCOSIDASE 31)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFAO.I.H.G.
XAt5g24550832526BGLU32 (BETA GLUCOSIDASE 32)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFAO.I.H.G.
XAt5g43470834367RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8)Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.O.I.H.G.
XAt5g55450835638protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;PO.I.H.G.
XAt5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationO.I.H.G.
SAt2g35980818171YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and during senescence. The gene product is localized to the chloroplast.O.I.H.G.
SAt3g45140823650LOX2 (LIPOXYGENASE 2)Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.O.I.H.G.
SAt5g64930836617CPR5 (CONSTITUTIVE EXPRESSION OF PR GENES 5)Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).O.I.H.G.
CAt1g18250838405ATLP-1encodes a thaumatin-like proteinO.I.H.G.
CAt1g19320838514pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.H.G.
CAt1g20030838592pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVO.I.H.G.
CAt1g73620843696thaumatin-like protein, putative / pathogenesis-related protein, putativeF:unknown;P:response to other organism;C:membrane;PMFBOO.I.H.G.
CAt1g73680843703pathogen-responsive alpha-dioxygenase, putativeF:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, peroxidase activity, heme binding;P:response to oxidative stress, response to other organism;C:cellular_component unknown;MFBPOVO.I.H.G.
CAt1g75030843841ATLP-3encodes a PR5-like proteinO.I.H.G.
CAt1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.O.I.H.G.
CAt1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.H.G.
CAt1g75800843913pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVAO.I.H.G.
CAt1g77700844106pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:cellular_component unknown;PFMBOVO.I.H.G.
CAt2g17860816296pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.H.G.
CAt2g24810817018pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOO.I.H.G.
CAt2g28790817428osmotin-like protein, putativeF:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBOO.I.H.G.
CAt3g01420821135DOX1Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.O.I.H.G.
CAt3g02840821225immediate-early fungal elicitor family proteinF:binding;P:response to other organism, response to ozone;C:unknown;POO.I.H.G.
CAt3g50450824209HR1 (HOMOLOG OF RPW8 1)Homolog of RPW8O.I.H.G.
CAt3g50460824210HR2 (HOMOLOG OF RPW8 2)Homolog of RPW8O.I.H.G.
CAt3g50470824211HR3 (HOMOLOG OF RPW8 3)Homolog of RPW8O.I.H.G.
CAt3g50480824212HR4 (HOMOLOG OF RPW8 4)Homolog of RPW8O.I.H.G.
CAt3g51660824329macrophage migration inhibitory factor family protein / MIF family proteinF:molecular_function unknown;P:inflammatory response, response to other organism;C:peroxisome;MPOBO.I.H.G.
CAt4g11650826770ATOSM34 (osmotin 34)osmotin-like proteinO.I.H.G.
CAt4g24180828519-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.H.G.
CAt4g36000829756-F:molecular_function unknown;P:response to other organism;C:cellular_component unknown;PMFBOVO.I.H.G.
CAt4g36010829757pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVO.I.H.G.
CAt4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVO.I.H.G.
CAt4g38670830023pathogenesis-related thaumatin family proteinF:unknown;P:response to other organism;C:unknown;PMFBOVO.I.H.G.
CAt5g01650831707macrophage migration inhibitory factor family protein / MIF family proteinF:molecular_function unknown;P:inflammatory response, response to other organism;C:chloroplast;MOBPFO.I.H.G.
CAt5g02140831881thaumatin-like protein, putativeF:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBOVO.I.H.G.
CAt5g24620832533thaumatin-like protein, putativeF:unknown;P:response to other organism;C:endomembrane system;MPOFBVAO.I.H.G.
CAt5g40020833999pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBOO.I.H.G.
CAt5g57170835823macrophage migration inhibitory factor family protein / MIF family proteinF:unknown;P:inflammatory response, response to other organism;C:chloroplast;MOBPFO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:000960734A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
GO:00517040Any process by which an organism has an effect on another organism of the same or different species.



The lower GO terms

Process ID Gene number Process name
GO:00015620A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.
GO:00022391A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an oomycetes.
GO:00096080A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiont, an organism living with an organism of a different species in close physical association. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
GO:000961520A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.
GO:000961763A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
GO:000962033A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
GO:000962459A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.
GO:00096258A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
GO:000981415A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
GO:00197300An immune response against microbes mediated through a body fluid. Examples of this process are seen in the antimicrobial humoral response of Drosophila melanogaster and Mus musculus.
GO:00521730A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting the defenses of a second organism, where the two organisms are in a symbiotic interaction.
GO:00751360A change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
GO:00800274A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.





Comparison with co-expressed genes



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