Biological process to genes

Query process ID GO:0051276
Process name A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.
Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. H.G. Other DB
COs01g0152300CF291303-Histone H2B.18e-24At1g07790HTB1O.I.H.G.
COs01g0153100CB662157-Histone H2B.18e-21At1g07790HTB1O.I.H.G.
COs01g0153300CB631324-Histone H2B.13e-14At1g07790HTB1O.I.H.G.
COs01g0839500BE039851-Histone H2B (CaH2B)3e-29At1g07790HTB1O.I.H.G.
COs05g0597200X88798.1-AT1 protein2e-1At4g39720VQ motif-containing proteinO.I.H.G.
COs09g0402100L24390.1-PF1 protein8e+0At2g34160nucleic acid bindingO.I.H.G.
COs10g0418000AF193345.1-Histone H2A.F/Z (At3g54560)6e-10At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.
LOs01g01529009629.m00523-Histone H2B4e-22At1g07790HTB1O.I.H.G.
LOs01g0589300AK058846.1-Single myb histone 19e-4At1g49950DNA-binding protein, putativeO.I.H.G.
LOs01g0897800AK072409.1-Rad21/Rec8 like protein, N-terminal domaincontaining protein8e-37At5g16270SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)O.I.H.G.
LOs02g04573009630.m02434--1e-22At4g40040histone H3.2O.I.H.G.
LOs03g0162200AK121533.1-Histone H2A3e-11At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.
LOs03g0743400CF330294-Histone H2A7e+0At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.
LOs04g0488100AY371047.1-Rad21/Rec8 like protein, N-terminal domaincontaining protein9e-2At2g25880AtAUR2 (AtAurora2)O.I.H.G.
LOs05g0113900AK074018.1-Histone H2A2e-9At1g08880H2AXAO.I.H.G.
LOs05g0461400AK067406.1-Histone H2A.2.16e-13At4g27230HTA2 (histone H2A)O.I.H.G.
LOs05g0489800AY438639.1-Histone H3.23e-5At4g40040histone H3.2O.I.H.G.
LOs05g0580500AY371049.1-Rad21/Rec8 like protein, N-terminal domaincontaining protein5e-21At5g05490SYN1 (SYNAPTIC 1)O.I.H.G.
LOs05g0596600AK107823.1-SMC protein, N-terminal domain containing protein6e-28At5g15920structural maintenance of chromosomes (SMC) family protein (MSS2)O.I.H.G.
LOs06g0130800U74296.1-Histone H5 family protein6e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.
LOs06g0130900D10965.1-Histone H3.31e-3At4g40030histone H3.2O.I.H.G.
LOs07g0184800AK059544.1-Histone-like protein1e-1At2g46090diacylglycerol kinase family proteinO.I.H.G.
LOs07g0545300AK099888.1-Histone H2A5e-19At4g27230HTA2 (histone H2A)O.I.H.G.
LOs07g0545400AK059228.1-Protein H2A4e-7At5g54640RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5)O.I.H.G.
LOs08g0266700AF314166.1-Rad21/Rec8 like protein, N-terminal domaincontaining protein1e+0At1g76820GTP binding / GTPaseO.I.H.G.
LOs10g0539500AK119699.1-Histone H46e-24At5g59690histone H4O.I.H.G.
LOs12g0613300AK100618.1-Myb, DNA-binding domain containing protein1e-2At1g49950DNA-binding protein, putativeO.I.H.G.

The upper GO terms

Process ID Gene number Process name
GO:00069960A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.

The lower GO terms

Process ID Gene number Process name
GO:00007150The identification of lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests the repair complex recognizes distortions in the DNA helix.
GO:00008190The process by which sister chromatids are organized and then physically separated and apportioned to two or more sets.
GO:00009720The process by which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery. In S. cerevisiae, this process involves cis-acting DNA sequences such as the TATA box and upstream activating sequence (UAS) elements, trans-acting transcriptional activators, and also the 3'-UTR of the transcript.
GO:00063250Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.
GO:00063440The maintenance of chromatin in a transciptionally silent state such as heterochromatin.
GO:00070620The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome.
GO:00302610The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.
GO:00307170The chromosome organization process by which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.
GO:00310520Regulated cleavage of the developing macronuclear genome at a limited number of chromosome breakage sites (CBS). The macronuclear destined segment (MDS) sequence adjacent to the CBS (or separated from it by a BES) receives a macronuclear telomere following chromosome breakage.
GO:00322000A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.
GO:00343970Any process by which a telomere is transported to, and/or maintained in, a specific location.
GO:00345080The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.
GO:00350790The decondensing (loosening) and swelling of the chromosomal sites of target genes on polytene chromosomes following response to a stimulus, to facilitate sudden bursts of transcriptional activity in response to transient environmental signals.
GO:00435700Any process involved in sustaining the fidelity and copy number of DNA repeat elements.
GO:00513120The alteration of chromosome structure from the condensed form to a relaxed disperse form.
GO:00513830A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.
GO:00700580The process by which tRNA genes, which are not linearly connected on the chromosome, are transported in three dimensions to, and maintained together in, the nucleolus. This clustered positioning leads to transcriptional silencing of nearby RNA polymerase II promoters (termed tRNA gene mediated (tgm) silencing) in S. cerevisiae.
GO:00701920A process of chromosome organization that is involved in meiosis.

Comparison with co-expressed genes

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