CoP: Co-expressed Biological Processes

Biological process to genes

Query process ID GO:0042545

Process name The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. H.G. Other DB
L Os01g0743200 AK109798.1 - Pectinesterase family protein 2e-4 At5g19730 pectinesterase family protein O.I. H.G.
L Os01g0788400 AK109763.1 - Pectinesterase (EC 3.1.1.11) (Pectinmethylesterase) (PE) 2e-7 At3g59010 pectinesterase family protein O.I. H.G.
L Os02g0288100 AK107019.1 - Pectinesterase 6e-8 At2g45220 pectinesterase family protein O.I. H.G.
L Os02g0688400 9630.m04499 - - 6e+0 At5g07420 pectinesterase family protein O.I. H.G.
L Os02g0783000 - - - 0 - - O.I. H.G.
L Os03g0399000 AK069492.1 - Pectinesterase family protein 1e-3 At3g06830 pectinesterase family protein O.I. H.G.
L Os04g0333300 - - - 0 - - O.I. H.G.
L Os04g0458900 AK121454.1 - Pectin methylesterase-like protein 7e-2 At2g47030 VGDH1 O.I. H.G.
L Os04g0641200 AK100257.1 - Pectinesterase (EC 3.1.1.11) (Fragment) 4e-1 At2g47040 VGD1 (VANGUARD1) O.I. H.G.
L Os04g0641300 AK071780.1 - Glutaredoxin domain containing protein 8e-1 At3g26510 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein O.I. H.G.
L Os06g0193200 9634.m00885 - Pectinesterase (EC 3.1.1.11) (Fragment) 3e+0 At3g06830 pectinesterase family protein O.I. H.G.
L Os07g0607400 AK106797.1 - Pectinesterase family protein 3e+0 At5g55590 QRT1 (QUARTET 1) O.I. H.G.
L Os07g0655600 AK119935.1 - Pectinesterase family protein 2e+0 At4g11660 AT-HSFB2B O.I. H.G.
L Os07g0675100 - - - 0 - - O.I. H.G.
L Os07g0691100 AK071728.1 - Pectinesterase (EC 3.1.1.11) (Fragment) 1e-6 At1g23200 pectinesterase family protein O.I. H.G.
L Os08g0220400 AK106909.1 - Pectinesterase family protein 2e-1 At3g11820 SYP121 (SYNTAXIN OF PLANTS 121) O.I. H.G.
L Os08g0450100 AK058651.1 - Pectinesterase (EC 3.1.1.11) (Fragment) 2e-2 At1g11370 pectinesterase family protein O.I. H.G.
L Os08g0450200 AK072779.1 - Pectinmethylesterase precursor (EC 3.1.1.11)(Fragment) 7e-2 At1g11580 PMEPCRA (METHYLESTERASE PCR A) O.I. H.G.
L Os09g0433700 AK072369.1 - Pectinmethylesterase precursor (EC 3.1.1.11)(Fragment) 7e-2 At4g15980 pectinesterase family protein O.I. H.G.

The upper GO terms

Process ID Gene number Process name
GO:0007047 1 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.

The lower GO terms

Process ID Gene number Process name
GO:0009827 0 The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.
GO:0042547 0 The series of events that occur during cell growth that result in chemical or structural changes to existing cell walls.
GO:0052386 0 A type of cell wall modification in which the cell wall is reinforced and made thicker.

Comparison with co-expressed genes

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