Biological process to genes

Query process ID GO:0042127
Process name Any process that modulates the frequency, rate or extent of cell proliferation.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g04110839287SDD1 (STOMATAL DENSITY AND DISTRIBUTION)Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.O.I.H.G.
XAt1g44900841056ATP binding / DNA binding / DNA-dependent ATPaseF:DNA-dependent ATPase activity, DNA binding, ATP binding;P:DNA replication, DNA replication initiation;C:nucleus, chloroplast;MOBFPAVO.I.H.G.
XAt2g369852745585ROT4 (ROTUNDIFOLIA4)Encodes ROTUNDIFOLIA4, a member of the seed plant-specific family of small peptides, RTFL (ROT FOUR LIKE), characterised by the presence of a 29-amino acid domain: RTF. Expressed in shoot apices, young leaves and flowers. Involved in controlling polarity-dependent cell proliferation.O.I.H.G.
XAt3g50070824169CYCD3Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.O.I.H.G.
XAt3g57920824961SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b.O.I.H.G.
XAt3g59900825160ARGOS (AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE)Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.O.I.H.G.
XAt4g14713827123PPD1 (PEAPOD 1)PPD1 (and its paralog, PPD2) encode plant-specific putative DNA-binding proteins. PPD1 and PPD2 are not found in grasses. Overexpression of PPD reduces lamina size by promoting the early arrest of dispersed meristematic cells DMC proliferation during leaf and silique development. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. The curvature of a deltappd leaf reflects the difference between excess growth of the lamina and a limitation to the extension capacity of its perimeter.O.I.H.G.
XAt4g16420827336ADA2B (HOMOLOG OF YEAST ADA2 2B)Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations.O.I.H.G.
XAt4g34160829564CYCD3encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.O.I.H.G.
XAt4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.O.I.H.G.
XAt5g13060831145ABAP1 (ARMADILLO BTB ARABIDOPSIS PROTEIN 1)Encodes a novel Armadillo BTB protein that intreacts with the pre-replication complex and several transcription factors. Overexpression results in decreased cell proliferation and loss of function results in increased cell proliferation suggesting a role in negative regulation of cellular proliferation.O.I.H.G.
XAt5g67260836861CYCD3Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.O.I.H.G.
CAt1g172355007700RTFL11 (ROTUNDIFOLIA LIKE 11)This gene is predicted to encode a small protein with a DVL domain found in the DVL / RTFL protein family. Over-expression analyses using truncated versions of a related family member, ROT4, suggest that the DVL / RTF domain is involved in regulating cell proliferation.O.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00507940Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.



The lower GO terms

Process ID Gene number Process name
GO:00019360Any process that modulates the frequency, rate, or extent of endothelial cell proliferation.
GO:00032500Any process that modulates the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.
GO:00032640Any process that modulates the frequency, rate or extent of cardioblast proliferation. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.
GO:00082849Any process that activates or increases the rate or extent of cell proliferation.
GO:00082853Any process that stops, prevents or reduces the rate or extent of cell proliferation.
GO:00104640Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.
GO:00108370Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.
GO:00148420Any process that modulates the frequency, rate or extent of satellite cell proliferation.
GO:00148570Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation.
GO:00219210The process that modulates the frequency, rate or extent of cell proliferation in the dorsal spinal cord.
GO:00219360The process that modulates the frequency, rate or extent of granule cell precursor proliferation.
GO:00336880Any process that modulates the frequency, rate or extent of osteoblast proliferation.
GO:00352060Any process that modulates the frequency, rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this is found in Drosophila melanogaster.
GO:00481450Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells.
GO:00486600Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation.
GO:00506780Any process that modulates the frequency, rate or extent of epithelial cell proliferation.
GO:00600430Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation.
GO:00602510Any process that modulates the frequency, rate or extent of glial cell proliferation.
GO:00607230Any process that modulates the rate, frequency, or extent of cell proliferation involved in embryonic placenta development.
GO:00607840Any process that modulates the frequency, rate or extent of cell proliferation resulting in the equilibrium of the number of cell within a tissue.
GO:00703440Any process that modulates the frequency, rate or extent of fat cell proliferation.
GO:00704450Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation.
GO:00706630Any process that modulates the frequency, rate or extent of leukocyte proliferation.





Comparison with co-expressed genes



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