Biological process to genes

Query process ID GO:0009814
Process name A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g29340839808PUB17 (PLANT U-BOX 17)Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato.O.I.H.G.
XAt1g51660841591ATMKK4 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4)Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.O.I.H.G.
XAt1g53940841833GLIP2Encodes a lipase, has in vitro lipase activity with p-nitrophenyl acetate and p-nitrophenyl butyrate, gene expression induced by hormones, negatively regulates auxin signaling, involved in disease resistanceO.I.H.G.
XAt3g21220821676ATMKK5 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5)Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.O.I.H.G.
XAt3g46530823806RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13)Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance.O.I.H.G.
XAt3g54920824657PMR6 (powdery mildew resistant 6)Powdery mildew resistant mutant encodes a pectate lyase-like proteinO.I.H.G.
XAt4g22300828325SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1)encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in ArabidopsisO.I.H.G.
XAt4g26070828713MEK1 (MAP KINASE/ ERK KINASE 1)Member of MAP Kinase Kinase. Likely functions in a stress-activated MAPK pathway. Can phosphorylate the MAPK AtMPK4, in response to stress. Gets phosphorylated by MEKK1 in response to wounding.O.I.H.G.
XAt4g29810829103ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2)encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.O.I.H.G.
XAt4g37000829854ACD2 (ACCELERATED CELL DEATH 2)Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae.O.I.H.G.
XAt5g10520830917RBK1 (Rop Binding protein Kinases 1)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:defense response, incompatible interaction;C:cytosol, endomembrane system;MPOBFVAO.I.H.G.
XAt5g36970833667NHL25 (NDR1/HIN1-LIKE 25)NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathwayO.I.H.G.
XAt5g40440834042ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)encodes a mitogen-activated protein kinase kinaseO.I.H.G.
XAt5g64890836612PROPEP2 (Elicitor peptide 2 precursor)F:molecular_function unknown;P:response to jasmonic acid stimulus, defense response, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;PO.I.H.G.
SAt5g06960830587OBF5 (OCS-ELEMENT BINDING FACTOR 5)Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element.O.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:0045087126Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
GO:005170755A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.



The lower GO terms

Process ID Gene number Process name
GO:000962723The salicylic acid mediated response to a pathogen which confers broad spectrum resistance.
GO:00096890The activation of the chemical reactions and pathways resulting in the formation of phytoalexins, low-molecular mass, lipophilic antimicrobial compounds that accumulate rapidly at sites of incompatible pathogen infection.
GO:000981626A response of an organism to a bacterium that prevents the occurrence or spread of disease.
GO:000981726A response of an organism to a fungus that prevents the occurrence or spread of disease.
GO:00098180A response of an organism to a protozoan that prevents the occurrence or spread of disease.
GO:00098617The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.





Comparison with co-expressed genes



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