Biological process to genes

Query process ID GO:0009788
Process name Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g01720839265ATAF1Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.O.I.H.G.
XAt1g180753766747MIR159/MIR159BEncodes a microRNA that targets several MYB family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUUGGAUUGAAGGGAGCUCUU. Functions redundantly with MIR159A. Plants that are doubly mutated for MIR159AB have curled leaves and reduced stature.O.I.H.G.
XAt1g736873767694MIR159/MIR159AEncodes a microRNA that targets several MYB family members. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UUUGGAUUGAAGGGAGCUCUA. Functions redundantly with MIR159B. Plants that are doubly mutated for MIR159AB have curled leaves and reduced stature.O.I.H.G.
XAt2g22430816775ATHB6Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.O.I.H.G.
XAt2g25170817055PKL (PICKLE)Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.O.I.H.G.
XAt2g33540817919CPL3 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3)F:phosphoprotein phosphatase activity, CTD phosphatase activity;P:response to salt stress;C:nucleus;MOFPBVO.I.H.G.
XAt3g02140821182TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.O.I.H.G.
XAt3g11410820314PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.O.I.H.G.
XAt3g59380825107FTA (FARNESYLTRANSFERASE A)Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.O.I.H.G.
XAt4g26080828714ABI1 (ABA INSENSITIVE 1)Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.O.I.H.G.
XAt5g01810830556CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)Encodes a CBL-interacting serine/threonine protein kinase, also has similarities to SOS2 kinase.O.I.H.G.
XAt5g40280834026ERA1 (ENHANCED RESPONSE TO ABA 1)encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.O.I.H.G.
XAt5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.O.I.H.G.
XAt5g64750836596ABR1 (ABA REPRESSOR1)Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.O.I.H.G.
SAt2g39550818540PGGT-Iencodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.O.I.H.G.
SAt3g48040823959ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.O.I.H.G.
NAt5g08335830731ATSTE14BEncodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.O.I.H.G.
NAt5g23320832396ATSTE14A (ARABIDOPSIS HOMOLOG OF YEAST STE14 A)Encodes a prenylcysteine alpha-carboxyl methyltransferase involved in methylation of isoprenylated proteins. This protein appears to have lower catalytic activity and a lower transcript expression level than the other ICMT present in Arabidopsis (At5g08335). Analysis of ICMT RNAi lines suggests that this protein may be involved in flower and stem development.O.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00097874Any process that modulates the frequency, rate or extent of signal transduction mediated by abscisic acid.
GO:00099681Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction.
GO:00485850Any process that stops, prevents or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.



The lower GO terms

Process ID Gene number Process name





Comparison with co-expressed genes



Back to the CoP portal site

Back to the KAGIANA project homepage