Biological process to genes

Query process ID GO:0009620
Process name A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g05010839345EFE (ETHYLENE-FORMING ENZYME)Encodes 1-aminocyclopropane-1-carboxylate oxidaseO.I.H.G.
XAt1g08720837393EDR1 (ENHANCED DISEASE RESISTANCE 1)enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearumO.I.H.G.
XAt1g11310837673MLO2 (MILDEW RESISTANCE LOCUS O 2)A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in A. thaliana does not involve the signaling molecules ethylene, jasmonic acid or salicylic acid, but requires a syntaxin, glycosyl hydrolase and ABC transporter.O.I.H.G.
XAt1g17420838314LOX3LipoxygenaseO.I.H.G.
XAt1g51360841560DABB1 (DIMERIC A/B BARREL DOMAINS-PROTEIN 1)Involved in defense against fungal pathogens and located in cytosol.O.I.H.G.
XAt1g516808415934CL1 (4-COUMARATE:COA LIGASE 1)encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.O.I.H.G.
XAt1g61850842482galactolipase/ phospholipaseEncodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.O.I.H.G.
XAt1g79670844306RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1)Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.O.I.H.G.
XAt2g06050815160OPR3 (OPDA-REDUCTASE 3)Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.O.I.H.G.
XAt2g17310816238SON1 (SUPPRESSOR OF NIM1-1 1)Encodes an F-Box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistanceO.I.H.G.
XAt2g30020817553protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity;P:defense response to fungus, response to fungus, response to wounding;C:chloroplast, protein serine/threonine phosphatase complex;MPOFBVAO.I.H.G.
XAt2g33380817901RD20 (RESPONSIVE TO DESSICATION 20)Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers.O.I.H.G.
XAt2g39660818549BIK1 (BOTRYTIS-INDUCED KINASE1)Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.O.I.H.G.
XAt2g46440819252ATCNGC11 (CYCLIC NUCLEOTIDE-GATED CHANNELS)Member of Cyclic nucleotide gated channel family. Positive regulator of resistance against avirulent fungal pathogen.O.I.H.G.
XAt2g46450819253ATCNGC12Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner.O.I.H.G.
XAt3g06490819827MYB108 (myb domain protein 108)putative transcription factor MYB108 (MYB108) mRNA,O.I.H.G.
XAt3g109852745879SAG20 (SENESCENCE ASSOCIATED GENE 20)A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.O.I.H.G.
XAt3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.O.I.H.G.
XAt3g212408216784CL2 (4-COUMARATE:COA LIGASE 2)encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.O.I.H.G.
XAt3g22231821788PCC1 (PATHOGEN AND CIRCADIAN CONTROLLED 1)Encodes a member of a novel 6 member Arabidopsis gene family. Expression of PCC1 is regulated by the circadian clock and is upregulated in response to both virulent and avirulent strains of Pseudomonas syringae pv. tomato.O.I.H.G.
XAt3g25780822169AOC3 (ALLENE OXIDE CYCLASE 3)Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.O.I.H.G.
XAt3g45140823650LOX2 (LIPOXYGENASE 2)Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.O.I.H.G.
XAt4g01370828151ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1.O.I.H.G.
XAt4g03550825650ATGSL05 (GLUCAN SYNTHASE-LIKE 5)Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense.O.I.H.G.
XAt4g16760827381ACX1 (ACYL-COA OXIDASE 1)Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.O.I.H.G.
XAt4g19660827710NPR4 (NPR1-like protein 4)Encodes a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways.O.I.H.G.
XAt5g08790830779ATAF2induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain.O.I.H.G.
XAt5g24530832524DMR6 (DOWNY MILDEW RESISTANT 6)Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.O.I.H.G.
XAt5g40990834101GLIP1 (GDSL LIPASE1)Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.O.I.H.G.
XAt5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.O.I.H.G.
XAt5g58600835974PMR5 (POWDERY MILDEW RESISTANT 5)Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica.O.I.H.G.
CAt3g24550822051ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1)encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.O.I.H.G.
CAt5g38280833810PR5Kputative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinaseO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:005170755A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.



The lower GO terms

Process ID Gene number Process name
GO:00018780A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species.
GO:00022384A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide.
GO:00096109A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism.
GO:00160461The series of events in which a stimulus from a fungus is received and converted into a molecular signal.
GO:005083282Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.





Comparison with co-expressed genes



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