Biological process to genes

Query process ID GO:0006944
Process name The joining of two lipid bilayers to form a single membrane.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g08350837355endomembrane protein 70 family proteinF:SNAP receptor activity;P:membrane fusion;C:integral to membrane, phragmoplast;MPOFO.I.H.G.
XAt1g15880838158GOS11 (golgi snare 11)Golgi SNARE 11 protein (GOS11)O.I.H.G.
XAt1g26670839208VTI1Bmember of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.O.I.H.G.
XAt2g45200819128GOS12 (GOLGI SNARE 12)Encodes a member of the GOS1 (Golgi SNARE) gene family.O.I.H.G.
XAt3g29100822557VTI13Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated.O.I.H.G.
XAt5g39630833959vesicle transport v-SNARE family proteinF:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAVO.I.H.G.
XAt5g50440835112MEMB12 (MEMBRIN 12)member of Membrin Gene FamilyO.I.H.G.
SAt1g08560837378SYP111 (SYNTAXIN OF PLANTS 111)member of SYP11 Gene FamilyO.I.H.G.
SAt1g11250837666SYP125 (SYNTAXIN OF PLANTS 125)member of SYP12 Gene FamilyO.I.H.G.
SAt1g13890837948SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.O.I.H.G.
SAt1g61290842423SYP124 (SYNTAXIN OF PLANTS 124)member of SYP12 Gene FamilyO.I.H.G.
SAt2g18260816342SYP112 (SYNTAXIN OF PLANTS 112)member of SYP11 Gene FamilyO.I.H.G.
SAt3g03800821141SYP131 (SYNTAXIN OF PLANTS 131)member of SYP13 Gene FamilyO.I.H.G.
SAt3g05710819740SYP43 (SYNTAXIN OF PLANTS 43)member of SYP4 Gene FamilyO.I.H.G.
SAt3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.O.I.H.G.
SAt3g24350822024SYP32 (SYNTAXIN OF PLANTS 32)member of Glycoside Hydrolase Family 17O.I.H.G.
SAt3g52400824405SYP122 (SYNTAXIN OF PLANTS 122)syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathwayO.I.H.G.
SAt4g02195827505SYP42 (SYNTAXIN OF PLANTS 42)member of SYP4 Gene FamilyO.I.H.G.
SAt4g03330827970SYP123 (SYNTAXIN OF PLANTS 123)member of SYP12 Gene FamilyO.I.H.G.
SAt4g17730827494SYP23 (SYNTAXIN OF PLANTS 23)member of SYP2 Gene FamilyO.I.H.G.
SAt4g32150829347ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711)AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.O.I.H.G.
SAt5g05760830461SYP31 (SYNTAXIN OF PLANTS 31)A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesisO.I.H.G.
SAt5g07880830681SNAP29member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.O.I.H.G.
SAt5g08080830702SYP132 (SYNTAXIN OF PLANTS 132)member of SYP13 Gene FamilyO.I.H.G.
SAt5g16830831546SYP21 (SYNTAXIN OF PLANTS 21)member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.O.I.H.G.
SAt5g26980832756SYP41 (SYNTAXIN OF PLANTS 41)member of SYP4 Gene FamilyO.I.H.G.
SAt5g46860834730VAM3Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.O.I.H.G.
SAt5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationO.I.H.G.
CAt1g28490839749SYP61 (SYNTAXIN OF PLANTS 61)Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.O.I.H.G.
CAt1g32270840119ATSYP24member of SYP2 Gene FamilyO.I.H.G.
CAt2g36900818264MEMB11 (MEMBRIN 11)member of Membrin Gene FamilyO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00160440A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.



The lower GO terms

Process ID Gene number Process name
GO:00000460The fusion of an autophagic vacuole with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole.
GO:00007401The joining of 2 or more lipid bilayer membranes that surround the nucleus.
GO:00020780The fusion of the plasma membrane of the sperm with the outer acrosomal membrane.
GO:00069060Fusion of the membrane of a transport vesicle with its target membrane.
GO:00080530Merging of two or more mitochondria within a cell to form a single compartment.
GO:00161890Fusion of a synaptic vesicle with the membrane of an endosome.
GO:00163200The joining of 2 or more lipid bilayer membranes that surround the endoplasmic reticulum.
GO:00190640A form of viral penetration which involves the fusion of the virion envelope with the cellular membrane.
GO:00421440The fusion of two vacuole membranes to form a single vacuole.
GO:00450260The joining of two or more lipid bilayer membranes that surround a cell.





Comparison with co-expressed genes



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