CoP: Co-expressed Biological Processes

Biological process to genes

Query process ID GO:0006915

Process name A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.

Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. H.G. Other DB
C Os01g0149500 AK100477.1 - - 4e-2 At3g05820 beta-fructofuranosidase/ catalytic O.I. H.G.
C Os01g0260500 9629.m01543 - Disease resistance protein family protein 4e+0 At3g26085 CAAX amino terminal protease family protein O.I. H.G.
C Os01g0269800 NM_188044.1 - Disease resistance protein family protein 6e+0 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) O.I. H.G.
C Os01g0335700 AK068195.1 - Disease resistance protein family protein 1e+0 At5g45680 FK506-binding protein 1 (FKBP13) O.I. H.G.
C Os01g0547000 AK121218.1 - LRR19 3e+0 At1g69818 - O.I. H.G.
C Os01g0781100 AY044444.1 - Rust resistance-like protein RP1 1e-1 At1g52220 - O.I. H.G.
C Os03g0379700 9631.m02580 - - 8e-2 At1g23080 PIN7 (PIN-FORMED 7) O.I. H.G.
C Os03g0566700 - - - 0 - - O.I. H.G.
C Os03g0579900 AK108792.1 - - 2e+0 At1g56700 pyrrolidone-carboxylate peptidase family protein O.I. H.G.
C Os03g0848700 AK065798.1 - Nbs-lrr resistance protein (Fragment) 1e-1 At5g16700 glycosyl hydrolase family 5 protein / cellulase family protein O.I. H.G.
C Os03g0849500 - - - 0 - - O.I. H.G.
C Os04g0111000 - - - 0 - - O.I. H.G.
C Os04g0111900 AK121138.1 - Vrga1 6e-2 At2g14288 - O.I. H.G.
C Os04g0619900 9632.m05127 - Ubiquitin domain containing protein 3e-2 At5g38300 unknown protein O.I. H.G.
C Os05g0380300 AK120094.1 - NBS-LRR protein (Fragment) 6e-1 At3g62090 PIL2 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 2) O.I. H.G.
C Os05g0492200 AF456243.1 - - 6e-4 At1g72150 PATL1 (PATELLIN 1) O.I. H.G.
C Os06g0125000 9634.m00255 - Disease resistance protein family protein 4e-1 At5g11270 OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3) O.I. H.G.
C Os06g0126500 AK065197.1 - Apoptosis regulator Bcl-2 protein, BAG domaincontaining protein 1e-2 At1g04445 zinc finger (C2H2 type) family protein O.I. H.G.
C Os08g0296600 AF456246.1 - Disease resistance protein family protein 5e-4 At5g40090 ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor O.I. H.G.
C Os08g0296700 AK121298.1 - Disease resistance protein family protein 3e+0 At4g30520 leucine-rich repeat family protein / protein kinase family protein O.I. H.G.
C Os08g0539700 AK099855.1 - PibH8 protein 5e-1 At4g07940 unknown protein O.I. H.G.
C Os08g0543050 - - - 0 - - O.I. H.G.
C Os09g0310300 9637.m01137 - - 6e+0 At3g61530 PANB2 O.I. H.G.
C Os09g0365400 9637.m01702 - - 5e-1 At5g40090 ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor O.I. H.G.
C Os10g0135100 9638.m00366 - NB-ARC domain containing protein 3e+0 At3g58130 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related O.I. H.G.
C Os10g0136100 AK121168.1 - NBS-LRR type resistance protein (Fragment) 4e-1 At4g19060 disease resistance protein-related O.I. H.G.
C Os10g0358200 9638.m01786 - - 2e-2 At4g19060 disease resistance protein-related O.I. H.G.
C Os10g0370100 AY327045.1 - Disease resistance protein family protein 4e-1 At3g25580 thioredoxin-related O.I. H.G.
C Os10g0474500 - - - 0 - - O.I. H.G.
C Os10g0568600 9638.m03827 - Disease resistance protein family protein 4e+0 At5g42957 unknown protein O.I. H.G.
C Os11g0229500 AB019240.2 - - 2e+0 At5g13510 ribosomal protein L10 family protein O.I. H.G.
C Os11g0560000 9639.m03201 - Hv1LRR2 1e+0 At1g45231 - O.I. H.G.
C Os11g0623800 - - - 0 - - O.I. H.G.
C Os11g0640600 AB017914.1 - Disease resistance protein family protein 4e-1 At4g29460 phospholipase A2 gamma, secretory low molecular weight O.I. H.G.
C Os11g0673600 AY043283.1 - Disease resistance protein family protein 5e-1 At5g60840 unknown protein O.I. H.G.
C Os11g0676050 - - - 0 - - O.I. H.G.
C Os11g0677000 AK064454.1 - Hypothetical protein 7e-1 At5g49230 HRB1 (HYPERSENSITIVE TO RED AND BLUE) O.I. H.G.
C Os12g0281300 AK071926.1 - Pi-ta protein 3e-2 At4g36500 unknown protein O.I. H.G.
C Os12g0553200 AB040028.1 - NB-ARC domain containing protein 2e+0 At4g18340 glycosyl hydrolase family 17 protein O.I. H.G.
L Os01g0149350 - - - 0 - - O.I. H.G.
L Os01g0178900 AK110770.1 - Hypothetical protein 3e+0 At5g47190 ribosomal protein L19 family protein O.I. H.G.
L Os01g0235400 AK100704.1 - Importin-alpha re-exporter (Cellular apoptosissusceptibility protein homolog) 7e+0 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) O.I. H.G.
L Os01g0359400 AK063509.1 - Disease resistance protein family protein 3e-3 At3g50950 disease resistance protein (CC-NBS-LRR class), putative O.I. H.G.
L Os01g0359800 NM_194005.1 - NB-ARC domain containing protein 7e-3 At5g23950 C2 domain-containing protein O.I. H.G.
L Os01g0603100 AK073480.1 - Disease resistance protein family protein 4e-1 At1g19950 HVA22H (HVA22-LIKE PROTEIN H (ATHVA22H)) O.I. H.G.
L Os01g0720900 - - - 0 - - O.I. H.G.
L Os01g0721000 - - - 0 - - O.I. H.G.
L Os01g0721200 NM_191808.1 - - 9e-1 At3g30210 MYB121 (MYB DOMAIN PROTEIN 121) O.I. H.G.
L Os01g0721300 - - - 0 - - O.I. H.G.
L Os01g0721400 AK063472.1 - NB-ARC domain containing protein 2e-1 At1g68670 myb family transcription factor O.I. H.G.
L Os01g0788500 AK120325.1 - Disease resistance gene analog PIC21 (Fragment) 4e-1 At3g48880 F-box family protein O.I. H.G.
L Os01g0799100 - - - 0 - - O.I. H.G.
L Os01g0953400 AK107454.1 - Conserved hypothetical protein 2e+0 At1g21880 LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR) O.I. H.G.
L Os02g0150600 AK105844.1 - Hypothetical protein 4e+0 At4g13200 unknown protein O.I. H.G.
L Os02g0191000 - - - 0 - - O.I. H.G.
L Os02g0199000 9630.m00977 - - 3e+0 At5g08180 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein O.I. H.G.
L Os02g0199200 9630.m00980 - - 3e+0 At5g55570 unknown protein O.I. H.G.
L Os02g0203500 9630.m01013 - Disease resistance protein family protein 2e-3 At5g11380 DXPS3 (1-deoxy-D-xylulose 5-phosphate synthase 3) O.I. H.G.
L Os02g0261300 - - - 0 - - O.I. H.G.
L Os02g0262800 AK073576.1 - NBS-LRR protein (Fragment) 1e-1 At3g47370 40S ribosomal protein S20 (RPS20B) O.I. H.G.
L Os02g0272900 AK101376.1 - Disease resistance protein family protein 1e+0 At1g32490 ESP3 (ENHANCED SILENCING PHENOTYPE 3) O.I. H.G.
L Os02g0281200 AK063172.1 - Disease resistance protein family protein 5e-1 At2g33630 3-beta hydroxysteroid dehydrogenase/isomerase family protein O.I. H.G.
L Os02g0282000 9630.m01703 - Disease resistance protein family protein 2e+0 At2g21900 WRKY59 O.I. H.G.
L Os02g0300500 - - - 0 - - O.I. H.G.
L Os02g0301800 AK067818.1 - Disease resistance protein family protein 5e-1 At5g20310 - O.I. H.G.
L Os02g0321800 AK067188.1 - B-cell receptor-associated 31-like family protein 1e-1 At5g56760 ATSERAT1 O.I. H.G.
L Os02g0456800 AK066598.1 - Pollen signalling protein with adenylyl cyclaseactivity (Fragment) 5e-1 At4g17220 ATMAP70-5 (microtubule-associated proteins 70-5) O.I. H.G.
L Os02g0558400 - - - 0 - - O.I. H.G.
L Os02g0612200 AK110995.1 - NB-ARC domain containing protein 9e-1 At3g22620 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. H.G.
L Os02g0652300 AK069478.1 - Engulfment and cell motility, ELM domaincontaining protein 9e-7 At2g44770 phagocytosis and cell motility protein ELMO1-related O.I. H.G.
L Os02g0719700 - - - 0 - - O.I. H.G.
L Os03g0207000 - - - 0 - - O.I. H.G.
L Os03g0207100 9631.m01005 - - 1e+0 At2g21880 ATRAB7A O.I. H.G.
L Os03g0422900 9631.m03030 - - 5e+0 At5g11300 CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS) O.I. H.G.
L Os03g0573500 - - - 0 - - O.I. H.G.
L Os03g0689400 AK101113.1 - Disease resistance protein family protein 2e+0 At5g05230 ubiquitin-protein ligase O.I. H.G.
L Os03g0689800 - - - 0 - - O.I. H.G.
L Os03g0849100 NM_185185.1 - TDRGA-1 (Fragment) 8e+0 At5g09320 VPS9B O.I. H.G.
L Os04g0101700 AK069225.1 - Engulfment and cell motility, ELM domaincontaining protein 4e-8 At1g03620 phagocytosis and cell motility protein ELMO1-related O.I. H.G.
L Os04g0375300 9632.m02908 - Disease resistance protein family protein 2e+0 At1g24020 MLP423 (MLP-LIKE PROTEIN 423) O.I. H.G.
L Os04g0514700 9632.m04165 - - 2e-1 At4g24275 - O.I. H.G.
L Os05g0216900 9633.m01122 - - 1e-1 At4g19270 unknown protein O.I. H.G.
L Os05g0240200 AK100136.1 - Disease resistance protein family protein 7e-7 At3g15880 protein binding O.I. H.G.
L Os05g0250700 9633.m01443 - Disease resistance protein family protein 2e+0 At3g60520 unknown protein O.I. H.G.
L Os05g0272900 AK107093.1 - B-cell receptor-associated 31-like family protein 1e-1 At1g11905 - O.I. H.G.
L Os05g0365300 AK120289.1 - NBS-LRR protein (Fragment) 2e-1 At5g40620 unknown protein O.I. H.G.
L Os05g0379700 - - - 0 - - O.I. H.G.
L Os05g0380800 9633.m02887 - Conserved hypothetical protein 1e-1 At5g24890 unknown protein O.I. H.G.
L Os05g0414200 AK106297.1 - Disease resistance protein family protein 8e-1 At4g29283 LCR21 (Low-molecular-weight cysteine-rich 21) O.I. H.G.
L Os05g0414300 AK120513.1 - Disease resistance protein family protein 9e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) O.I. H.G.
L Os05g0479800 AK121345.1 - Disease resistance protein family protein 2e+0 At1g71520 AP2 domain-containing transcription factor, putative O.I. H.G.
L Os05g0533400 AK107660.1 - - 2e-1 At3g29375 XH domain-containing protein O.I. H.G.
L Os06g0146100 AK120452.1 - Disease resistance protein family protein 2e+0 At3g31430 unknown protein O.I. H.G.
L Os06g0163900 AK102733.1 - Disease resistance protein family protein 1e-1 At2g41990 unknown protein O.I. H.G.
L Os06g0279900 - - - 0 - - O.I. H.G.
L Os06g0286500 AK121397.1 - NBS-LRR disease resistance protein homologue 4e-1 At1g12210 RFL1 (RPS5-like 1) O.I. H.G.
L Os06g0286700 - - - 0 - - O.I. H.G.
L Os06g0576700 - - - 0 - - O.I. H.G.
L Os06g0619000 AK065719.1 - Disease resistance protein family protein 2e+0 At2g48075 unknown protein O.I. H.G.
L Os06g0621200 - - - 0 - - O.I. H.G.
L Os06g0621500 AK120647.1 - Disease resistance protein family protein 2e-1 At1g02500 SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1) O.I. H.G.
L Os06g0693100 AK099477.1 - Disease resistance protein family protein 2e+0 At5g23370 GRAM domain-containing protein / ABA-responsive protein-related O.I. H.G.
L Os06g0703100 AK073053.1 - Hypothetical protein 4e-1 At3g57310 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. H.G.
L Os06g0707700 AK100720.1 - Disease resistance protein family protein 1e+0 At4g37220 stress-responsive protein, putative O.I. H.G.
L Os07g0116800 - - - 0 - - O.I. H.G.
L Os07g0117000 AU030486 - NB-ARC domain containing protein 3e+0 At5g30341 unknown protein O.I. H.G.
L Os07g0117300 9635.m00168 - - 8e-1 At1g53850 PAE1 O.I. H.G.
L Os07g0117400 AK070693.1 - NB-ARC domain containing protein 3e-1 At2g17780 MCA2 (mid1-complementing activity 2) O.I. H.G.
L Os07g0117800 NM_194165.1 - NB-ARC domain containing protein 7e-1 At3g04940 CYSD1 (CYSTEINE SYNTHASE D1) O.I. H.G.
L Os07g0141900 - - - 0 - - O.I. H.G.
L Os07g0197200 9635.m00955 - - 2e+0 At4g28290 unknown protein O.I. H.G.
L Os07g0197500 9635.m00956 - - 9e-1 At1g77420 hydrolase, alpha/beta fold family protein O.I. H.G.
L Os07g0230200 - - - 0 - - O.I. H.G.
L Os07g0273700 9635.m01732 - Transcriptional factor B3 family protein 5e-1 At1g01030 NGA3 (NGATHA3) O.I. H.G.
L Os07g0294100 9635.m01948 - - 9e-2 At5g62850 AtVEX1 (VEGETATIVE CELL EXPRESSED1) O.I. H.G.
L Os07g0481300 9635.m02906 - Disease resistance protein family protein 2e-3 At1g77280 protein kinase family protein O.I. H.G.
L Os07g0481400 - - - 0 - - O.I. H.G.
L Os07g0501500 - - - 0 - - O.I. H.G.
L Os07g0521100 AK110812.1 - Leucine-rich repeat, typical subtype containingprotein 1e+0 At1g60830 U2 snRNP auxiliary factor large subunit, putative O.I. H.G.
L Os07g0521600 AK119347.1 - NBS-LRR protein (Fragment) 2e+0 At5g27730 unknown protein O.I. H.G.
L Os07g0521800 9635.m03326 - Disease resistance protein family protein 4e-1 At4g30900 - O.I. H.G.
L Os07g0599100 9635.m04080 - Disease resistance protein family protein 3e+0 At5g59590 UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2) O.I. H.G.
L Os08g0107000 9636.m00057 - Disease resistance protein family protein 9e-2 At3g63230 unknown protein O.I. H.G.
L Os08g0154100 9637.m02348 - - 4e-1 At4g18580 unknown protein O.I. H.G.
L Os08g0174800 AK071471.1 - Somatic embryogenesis receptor-like kinase 1e-29 At4g33430 BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE) O.I. H.G.
L Os08g0190300 9636.m00866 - Disease resistance protein family protein 3e-2 At3g24860 hydroxyproline-rich glycoprotein family protein O.I. H.G.
L Os08g0193700 9636.m00897 - - 4e-1 At5g47140 zinc finger (GATA type) family protein O.I. H.G.
L Os08g0205100 AK119306.1 - NBS-LRR disease resistance protein homologue(Fragment) 4e-1 At3g54410 unknown protein O.I. H.G.
L Os08g0205150 - - - 0 - - O.I. H.G.
L Os08g0235600 9636.m01365 - Disease resistance protein family protein 6e-3 At2g05420 meprin and TRAF homology domain-containing protein / MATH domain-containing protein O.I. H.G.
L Os08g0246300 AK073893.1 - Disease resistance protein family protein 1e-1 At2g42975 unknown protein O.I. H.G.
L Os08g0261000 AK100590.1 - Disease resistance protein family protein 2e+0 At1g23110 unknown protein O.I. H.G.
L Os08g0293300 AK073881.1 - Disease resistance protein family protein 4e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) O.I. H.G.
L Os08g0371900 - - - 0 - - O.I. H.G.
L Os08g0372700 - - - 0 - - O.I. H.G.
L Os08g0373400 9636.m02831 - Disease resistance protein family protein 4e-1 At3g12720 ATMYB67 (MYB DOMAIN PROTEIN 67) O.I. H.G.
L Os08g0387700 AK063348.1 - Disease resistance protein family protein 2e+0 At5g66990 RWP-RK domain-containing protein O.I. H.G.
L Os08g0388300 AK066779.1 - Disease resistance protein family protein 2e+0 At5g63500 unknown protein O.I. H.G.
L Os08g0396700 AK065899.1 - DC1 domain containing protein 1e-1 At3g55040 GSTL2 O.I. H.G.
L Os08g0397000 9636.m03060 - - 9e-1 At1g11380 unknown protein O.I. H.G.
L Os08g0412100 AK072641.1 - Disease resistance protein family protein 2e+0 At2g28440 proline-rich family protein O.I. H.G.
L Os08g0424600 - - - 0 - - O.I. H.G.
L Os08g0424800 9636.m03290 - - 1e+0 At5g63370 protein kinase family protein O.I. H.G.
L Os08g0539400 AY336988.1 - Resistance protein T10rga2-1A 5e-1 At5g35450 disease resistance protein (CC-NBS-LRR class), putative O.I. H.G.
L Os08g0542200 AK099583.1 - - 4e-1 At5g03070 IMPA-9 (IMPORTIN ALPHA ISOFORM 9) O.I. H.G.
L Os08g0543500 AK121394.1 - Disease resistance protein family protein 2e+0 At5g47740 - O.I. H.G.
L Os09g0272900 AK111519.1 - Skp1 (Fragment) 2e-5 At5g42190 ASK2 (ARABIDOPSIS SKP1-LIKE 2) O.I. H.G.
L Os09g0311600 AK102321.1 - NBS-LRR type resistance protein (Fragment) 4e-1 At2g03840 TET13 (TETRASPANIN13) O.I. H.G.
L Os09g0313500 AK065687.1 - Disease resistance protein family protein 5e-1 At2g42390 protein kinase C substrate, heavy chain-related O.I. H.G.
L Os09g0313600 - - - 0 - - O.I. H.G.
L Os09g0328950 - - - 0 - - O.I. H.G.
L Os09g0517200 9637.m02946 - Disease resistance protein family protein 4e-1 At5g23100 unknown protein O.I. H.G.
L Os10g0132700 - - - 0 - - O.I. H.G.
L Os10g0161400 AK102113.1 - Disease resistance protein family protein 1e-1 At5g24880 - O.I. H.G.
L Os10g0183000 AK101801.1 - Disease resistance protein family protein 4e-1 At3g05810 unknown protein O.I. H.G.

ECC	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.
C	Os01g0149500	AK100477.1	-	-	4e-2	At3g05820	beta-fructofuranosidase/ catalytic	O.I.	H.G.
C	Os01g0260500	9629.m01543	-	Disease resistance protein family protein	4e+0	At3g26085	CAAX amino terminal protease family protein	O.I.	H.G.
C	Os01g0269800	NM_188044.1	-	Disease resistance protein family protein	6e+0	At5g47220	ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)	O.I.	H.G.
C	Os01g0335700	AK068195.1	-	Disease resistance protein family protein	1e+0	At5g45680	FK506-binding protein 1 (FKBP13)	O.I.	H.G.
C	Os01g0547000	AK121218.1	-	LRR19	3e+0	At1g69818	-	O.I.	H.G.
C	Os01g0781100	AY044444.1	-	Rust resistance-like protein RP1	1e-1	At1g52220	-	O.I.	H.G.
C	Os03g0379700	9631.m02580	-	-	8e-2	At1g23080	PIN7 (PIN-FORMED 7)	O.I.	H.G.
C	Os03g0566700	-	-	-	0	-	-	O.I.	H.G.
C	Os03g0579900	AK108792.1	-	-	2e+0	At1g56700	pyrrolidone-carboxylate peptidase family protein	O.I.	H.G.
C	Os03g0848700	AK065798.1	-	Nbs-lrr resistance protein (Fragment)	1e-1	At5g16700	glycosyl hydrolase family 5 protein / cellulase family protein	O.I.	H.G.
C	Os03g0849500	-	-	-	0	-	-	O.I.	H.G.
C	Os04g0111000	-	-	-	0	-	-	O.I.	H.G.
C	Os04g0111900	AK121138.1	-	Vrga1	6e-2	At2g14288	-	O.I.	H.G.
C	Os04g0619900	9632.m05127	-	Ubiquitin domain containing protein	3e-2	At5g38300	unknown protein	O.I.	H.G.
C	Os05g0380300	AK120094.1	-	NBS-LRR protein (Fragment)	6e-1	At3g62090	PIL2 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 2)	O.I.	H.G.
C	Os05g0492200	AF456243.1	-	-	6e-4	At1g72150	PATL1 (PATELLIN 1)	O.I.	H.G.
C	Os06g0125000	9634.m00255	-	Disease resistance protein family protein	4e-1	At5g11270	OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3)	O.I.	H.G.
C	Os06g0126500	AK065197.1	-	Apoptosis regulator Bcl-2 protein, BAG domaincontaining protein	1e-2	At1g04445	zinc finger (C2H2 type) family protein	O.I.	H.G.
C	Os08g0296600	AF456246.1	-	Disease resistance protein family protein	5e-4	At5g40090	ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor	O.I.	H.G.
C	Os08g0296700	AK121298.1	-	Disease resistance protein family protein	3e+0	At4g30520	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.
C	Os08g0539700	AK099855.1	-	PibH8 protein	5e-1	At4g07940	unknown protein	O.I.	H.G.
C	Os08g0543050	-	-	-	0	-	-	O.I.	H.G.
C	Os09g0310300	9637.m01137	-	-	6e+0	At3g61530	PANB2	O.I.	H.G.
C	Os09g0365400	9637.m01702	-	-	5e-1	At5g40090	ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor	O.I.	H.G.
C	Os10g0135100	9638.m00366	-	NB-ARC domain containing protein	3e+0	At3g58130	N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related	O.I.	H.G.
C	Os10g0136100	AK121168.1	-	NBS-LRR type resistance protein (Fragment)	4e-1	At4g19060	disease resistance protein-related	O.I.	H.G.
C	Os10g0358200	9638.m01786	-	-	2e-2	At4g19060	disease resistance protein-related	O.I.	H.G.
C	Os10g0370100	AY327045.1	-	Disease resistance protein family protein	4e-1	At3g25580	thioredoxin-related	O.I.	H.G.
C	Os10g0474500	-	-	-	0	-	-	O.I.	H.G.
C	Os10g0568600	9638.m03827	-	Disease resistance protein family protein	4e+0	At5g42957	unknown protein	O.I.	H.G.
C	Os11g0229500	AB019240.2	-	-	2e+0	At5g13510	ribosomal protein L10 family protein	O.I.	H.G.
C	Os11g0560000	9639.m03201	-	Hv1LRR2	1e+0	At1g45231	-	O.I.	H.G.
C	Os11g0623800	-	-	-	0	-	-	O.I.	H.G.
C	Os11g0640600	AB017914.1	-	Disease resistance protein family protein	4e-1	At4g29460	phospholipase A2 gamma, secretory low molecular weight	O.I.	H.G.
C	Os11g0673600	AY043283.1	-	Disease resistance protein family protein	5e-1	At5g60840	unknown protein	O.I.	H.G.
C	Os11g0676050	-	-	-	0	-	-	O.I.	H.G.
C	Os11g0677000	AK064454.1	-	Hypothetical protein	7e-1	At5g49230	HRB1 (HYPERSENSITIVE TO RED AND BLUE)	O.I.	H.G.
C	Os12g0281300	AK071926.1	-	Pi-ta protein	3e-2	At4g36500	unknown protein	O.I.	H.G.
C	Os12g0553200	AB040028.1	-	NB-ARC domain containing protein	2e+0	At4g18340	glycosyl hydrolase family 17 protein	O.I.	H.G.
L	Os01g0149350	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0178900	AK110770.1	-	Hypothetical protein	3e+0	At5g47190	ribosomal protein L19 family protein	O.I.	H.G.
L	Os01g0235400	AK100704.1	-	Importin-alpha re-exporter (Cellular apoptosissusceptibility protein homolog)	7e+0	At5g53300	UBC10 (ubiquitin-conjugating enzyme 10)	O.I.	H.G.
L	Os01g0359400	AK063509.1	-	Disease resistance protein family protein	3e-3	At3g50950	disease resistance protein (CC-NBS-LRR class), putative	O.I.	H.G.
L	Os01g0359800	NM_194005.1	-	NB-ARC domain containing protein	7e-3	At5g23950	C2 domain-containing protein	O.I.	H.G.
L	Os01g0603100	AK073480.1	-	Disease resistance protein family protein	4e-1	At1g19950	HVA22H (HVA22-LIKE PROTEIN H (ATHVA22H))	O.I.	H.G.
L	Os01g0720900	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0721000	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0721200	NM_191808.1	-	-	9e-1	At3g30210	MYB121 (MYB DOMAIN PROTEIN 121)	O.I.	H.G.
L	Os01g0721300	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0721400	AK063472.1	-	NB-ARC domain containing protein	2e-1	At1g68670	myb family transcription factor	O.I.	H.G.
L	Os01g0788500	AK120325.1	-	Disease resistance gene analog PIC21 (Fragment)	4e-1	At3g48880	F-box family protein	O.I.	H.G.
L	Os01g0799100	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0953400	AK107454.1	-	Conserved hypothetical protein	2e+0	At1g21880	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	O.I.	H.G.
L	Os02g0150600	AK105844.1	-	Hypothetical protein	4e+0	At4g13200	unknown protein	O.I.	H.G.
L	Os02g0191000	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0199000	9630.m00977	-	-	3e+0	At5g08180	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	O.I.	H.G.
L	Os02g0199200	9630.m00980	-	-	3e+0	At5g55570	unknown protein	O.I.	H.G.
L	Os02g0203500	9630.m01013	-	Disease resistance protein family protein	2e-3	At5g11380	DXPS3 (1-deoxy-D-xylulose 5-phosphate synthase 3)	O.I.	H.G.
L	Os02g0261300	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0262800	AK073576.1	-	NBS-LRR protein (Fragment)	1e-1	At3g47370	40S ribosomal protein S20 (RPS20B)	O.I.	H.G.
L	Os02g0272900	AK101376.1	-	Disease resistance protein family protein	1e+0	At1g32490	ESP3 (ENHANCED SILENCING PHENOTYPE 3)	O.I.	H.G.
L	Os02g0281200	AK063172.1	-	Disease resistance protein family protein	5e-1	At2g33630	3-beta hydroxysteroid dehydrogenase/isomerase family protein	O.I.	H.G.
L	Os02g0282000	9630.m01703	-	Disease resistance protein family protein	2e+0	At2g21900	WRKY59	O.I.	H.G.
L	Os02g0300500	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0301800	AK067818.1	-	Disease resistance protein family protein	5e-1	At5g20310	-	O.I.	H.G.
L	Os02g0321800	AK067188.1	-	B-cell receptor-associated 31-like family protein	1e-1	At5g56760	ATSERAT1	O.I.	H.G.
L	Os02g0456800	AK066598.1	-	Pollen signalling protein with adenylyl cyclaseactivity (Fragment)	5e-1	At4g17220	ATMAP70-5 (microtubule-associated proteins 70-5)	O.I.	H.G.
L	Os02g0558400	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0612200	AK110995.1	-	NB-ARC domain containing protein	9e-1	At3g22620	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.
L	Os02g0652300	AK069478.1	-	Engulfment and cell motility, ELM domaincontaining protein	9e-7	At2g44770	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.
L	Os02g0719700	-	-	-	0	-	-	O.I.	H.G.
L	Os03g0207000	-	-	-	0	-	-	O.I.	H.G.
L	Os03g0207100	9631.m01005	-	-	1e+0	At2g21880	ATRAB7A	O.I.	H.G.
L	Os03g0422900	9631.m03030	-	-	5e+0	At5g11300	CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS)	O.I.	H.G.
L	Os03g0573500	-	-	-	0	-	-	O.I.	H.G.
L	Os03g0689400	AK101113.1	-	Disease resistance protein family protein	2e+0	At5g05230	ubiquitin-protein ligase	O.I.	H.G.
L	Os03g0689800	-	-	-	0	-	-	O.I.	H.G.
L	Os03g0849100	NM_185185.1	-	TDRGA-1 (Fragment)	8e+0	At5g09320	VPS9B	O.I.	H.G.
L	Os04g0101700	AK069225.1	-	Engulfment and cell motility, ELM domaincontaining protein	4e-8	At1g03620	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.
L	Os04g0375300	9632.m02908	-	Disease resistance protein family protein	2e+0	At1g24020	MLP423 (MLP-LIKE PROTEIN 423)	O.I.	H.G.
L	Os04g0514700	9632.m04165	-	-	2e-1	At4g24275	-	O.I.	H.G.
L	Os05g0216900	9633.m01122	-	-	1e-1	At4g19270	unknown protein	O.I.	H.G.
L	Os05g0240200	AK100136.1	-	Disease resistance protein family protein	7e-7	At3g15880	protein binding	O.I.	H.G.
L	Os05g0250700	9633.m01443	-	Disease resistance protein family protein	2e+0	At3g60520	unknown protein	O.I.	H.G.
L	Os05g0272900	AK107093.1	-	B-cell receptor-associated 31-like family protein	1e-1	At1g11905	-	O.I.	H.G.
L	Os05g0365300	AK120289.1	-	NBS-LRR protein (Fragment)	2e-1	At5g40620	unknown protein	O.I.	H.G.
L	Os05g0379700	-	-	-	0	-	-	O.I.	H.G.
L	Os05g0380800	9633.m02887	-	Conserved hypothetical protein	1e-1	At5g24890	unknown protein	O.I.	H.G.
L	Os05g0414200	AK106297.1	-	Disease resistance protein family protein	8e-1	At4g29283	LCR21 (Low-molecular-weight cysteine-rich 21)	O.I.	H.G.
L	Os05g0414300	AK120513.1	-	Disease resistance protein family protein	9e-2	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	O.I.	H.G.
L	Os05g0479800	AK121345.1	-	Disease resistance protein family protein	2e+0	At1g71520	AP2 domain-containing transcription factor, putative	O.I.	H.G.
L	Os05g0533400	AK107660.1	-	-	2e-1	At3g29375	XH domain-containing protein	O.I.	H.G.
L	Os06g0146100	AK120452.1	-	Disease resistance protein family protein	2e+0	At3g31430	unknown protein	O.I.	H.G.
L	Os06g0163900	AK102733.1	-	Disease resistance protein family protein	1e-1	At2g41990	unknown protein	O.I.	H.G.
L	Os06g0279900	-	-	-	0	-	-	O.I.	H.G.
L	Os06g0286500	AK121397.1	-	NBS-LRR disease resistance protein homologue	4e-1	At1g12210	RFL1 (RPS5-like 1)	O.I.	H.G.
L	Os06g0286700	-	-	-	0	-	-	O.I.	H.G.
L	Os06g0576700	-	-	-	0	-	-	O.I.	H.G.
L	Os06g0619000	AK065719.1	-	Disease resistance protein family protein	2e+0	At2g48075	unknown protein	O.I.	H.G.
L	Os06g0621200	-	-	-	0	-	-	O.I.	H.G.
L	Os06g0621500	AK120647.1	-	Disease resistance protein family protein	2e-1	At1g02500	SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)	O.I.	H.G.
L	Os06g0693100	AK099477.1	-	Disease resistance protein family protein	2e+0	At5g23370	GRAM domain-containing protein / ABA-responsive protein-related	O.I.	H.G.
L	Os06g0703100	AK073053.1	-	Hypothetical protein	4e-1	At3g57310	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.
L	Os06g0707700	AK100720.1	-	Disease resistance protein family protein	1e+0	At4g37220	stress-responsive protein, putative	O.I.	H.G.
L	Os07g0116800	-	-	-	0	-	-	O.I.	H.G.
L	Os07g0117000	AU030486	-	NB-ARC domain containing protein	3e+0	At5g30341	unknown protein	O.I.	H.G.
L	Os07g0117300	9635.m00168	-	-	8e-1	At1g53850	PAE1	O.I.	H.G.
L	Os07g0117400	AK070693.1	-	NB-ARC domain containing protein	3e-1	At2g17780	MCA2 (mid1-complementing activity 2)	O.I.	H.G.
L	Os07g0117800	NM_194165.1	-	NB-ARC domain containing protein	7e-1	At3g04940	CYSD1 (CYSTEINE SYNTHASE D1)	O.I.	H.G.
L	Os07g0141900	-	-	-	0	-	-	O.I.	H.G.
L	Os07g0197200	9635.m00955	-	-	2e+0	At4g28290	unknown protein	O.I.	H.G.
L	Os07g0197500	9635.m00956	-	-	9e-1	At1g77420	hydrolase, alpha/beta fold family protein	O.I.	H.G.
L	Os07g0230200	-	-	-	0	-	-	O.I.	H.G.
L	Os07g0273700	9635.m01732	-	Transcriptional factor B3 family protein	5e-1	At1g01030	NGA3 (NGATHA3)	O.I.	H.G.
L	Os07g0294100	9635.m01948	-	-	9e-2	At5g62850	AtVEX1 (VEGETATIVE CELL EXPRESSED1)	O.I.	H.G.
L	Os07g0481300	9635.m02906	-	Disease resistance protein family protein	2e-3	At1g77280	protein kinase family protein	O.I.	H.G.
L	Os07g0481400	-	-	-	0	-	-	O.I.	H.G.
L	Os07g0501500	-	-	-	0	-	-	O.I.	H.G.
L	Os07g0521100	AK110812.1	-	Leucine-rich repeat, typical subtype containingprotein	1e+0	At1g60830	U2 snRNP auxiliary factor large subunit, putative	O.I.	H.G.
L	Os07g0521600	AK119347.1	-	NBS-LRR protein (Fragment)	2e+0	At5g27730	unknown protein	O.I.	H.G.
L	Os07g0521800	9635.m03326	-	Disease resistance protein family protein	4e-1	At4g30900	-	O.I.	H.G.
L	Os07g0599100	9635.m04080	-	Disease resistance protein family protein	3e+0	At5g59590	UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2)	O.I.	H.G.
L	Os08g0107000	9636.m00057	-	Disease resistance protein family protein	9e-2	At3g63230	unknown protein	O.I.	H.G.
L	Os08g0154100	9637.m02348	-	-	4e-1	At4g18580	unknown protein	O.I.	H.G.
L	Os08g0174800	AK071471.1	-	Somatic embryogenesis receptor-like kinase	1e-29	At4g33430	BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE)	O.I.	H.G.
L	Os08g0190300	9636.m00866	-	Disease resistance protein family protein	3e-2	At3g24860	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.
L	Os08g0193700	9636.m00897	-	-	4e-1	At5g47140	zinc finger (GATA type) family protein	O.I.	H.G.
L	Os08g0205100	AK119306.1	-	NBS-LRR disease resistance protein homologue(Fragment)	4e-1	At3g54410	unknown protein	O.I.	H.G.
L	Os08g0205150	-	-	-	0	-	-	O.I.	H.G.
L	Os08g0235600	9636.m01365	-	Disease resistance protein family protein	6e-3	At2g05420	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.
L	Os08g0246300	AK073893.1	-	Disease resistance protein family protein	1e-1	At2g42975	unknown protein	O.I.	H.G.
L	Os08g0261000	AK100590.1	-	Disease resistance protein family protein	2e+0	At1g23110	unknown protein	O.I.	H.G.
L	Os08g0293300	AK073881.1	-	Disease resistance protein family protein	4e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	H.G.
L	Os08g0371900	-	-	-	0	-	-	O.I.	H.G.
L	Os08g0372700	-	-	-	0	-	-	O.I.	H.G.
L	Os08g0373400	9636.m02831	-	Disease resistance protein family protein	4e-1	At3g12720	ATMYB67 (MYB DOMAIN PROTEIN 67)	O.I.	H.G.
L	Os08g0387700	AK063348.1	-	Disease resistance protein family protein	2e+0	At5g66990	RWP-RK domain-containing protein	O.I.	H.G.
L	Os08g0388300	AK066779.1	-	Disease resistance protein family protein	2e+0	At5g63500	unknown protein	O.I.	H.G.
L	Os08g0396700	AK065899.1	-	DC1 domain containing protein	1e-1	At3g55040	GSTL2	O.I.	H.G.
L	Os08g0397000	9636.m03060	-	-	9e-1	At1g11380	unknown protein	O.I.	H.G.
L	Os08g0412100	AK072641.1	-	Disease resistance protein family protein	2e+0	At2g28440	proline-rich family protein	O.I.	H.G.
L	Os08g0424600	-	-	-	0	-	-	O.I.	H.G.
L	Os08g0424800	9636.m03290	-	-	1e+0	At5g63370	protein kinase family protein	O.I.	H.G.
L	Os08g0539400	AY336988.1	-	Resistance protein T10rga2-1A	5e-1	At5g35450	disease resistance protein (CC-NBS-LRR class), putative	O.I.	H.G.
L	Os08g0542200	AK099583.1	-	-	4e-1	At5g03070	IMPA-9 (IMPORTIN ALPHA ISOFORM 9)	O.I.	H.G.
L	Os08g0543500	AK121394.1	-	Disease resistance protein family protein	2e+0	At5g47740	-	O.I.	H.G.
L	Os09g0272900	AK111519.1	-	Skp1 (Fragment)	2e-5	At5g42190	ASK2 (ARABIDOPSIS SKP1-LIKE 2)	O.I.	H.G.
L	Os09g0311600	AK102321.1	-	NBS-LRR type resistance protein (Fragment)	4e-1	At2g03840	TET13 (TETRASPANIN13)	O.I.	H.G.
L	Os09g0313500	AK065687.1	-	Disease resistance protein family protein	5e-1	At2g42390	protein kinase C substrate, heavy chain-related	O.I.	H.G.
L	Os09g0313600	-	-	-	0	-	-	O.I.	H.G.
L	Os09g0328950	-	-	-	0	-	-	O.I.	H.G.
L	Os09g0517200	9637.m02946	-	Disease resistance protein family protein	4e-1	At5g23100	unknown protein	O.I.	H.G.
L	Os10g0132700	-	-	-	0	-	-	O.I.	H.G.
L	Os10g0161400	AK102113.1	-	Disease resistance protein family protein	1e-1	At5g24880	-	O.I.	H.G.
L	Os10g0183000	AK101801.1	-	Disease resistance protein family protein	4e-1	At3g05810	unknown protein	O.I.	H.G.

The upper GO terms

Process ID Gene number Process name
GO:0012501 0 Cell death resulting from activation of endogenous cellular processes.

Process ID	Gene number	Process name
GO:0012501	0	Cell death resulting from activation of endogenous cellular processes.

The lower GO terms

Process ID Gene number Process name
GO:0001552 0 Ovarian follicle demise mediated by apoptosis.
GO:0006919 0 Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis.
GO:0006921 0 The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.
GO:0006925 0 The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.
GO:0006926 0 The process of apoptosis in cells infected with a virus.
GO:0006927 0 The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm.
GO:0008633 0 The conversion of proteins that induce or sustain apoptosis to an active form.
GO:0008637 0 The morphological and physiological alterations undergone by mitochondria during apoptosis.
GO:0010657 0 A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
GO:0030262 0 The morphological and physiological alterations undergone by the nucleus during apoptosis.
GO:0033028 0 The process of apoptosis in myeloid cells.
GO:0034349 0 The process of apoptosis in glial cells.
GO:0043276 0 Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.
GO:0045476 0 The process by which nurse cells undergo apoptosis. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptosis.
GO:0051402 0 The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
GO:0060561 0 The process of apoptosis that contributes to the shaping of an anatomical structure.
GO:0070059 0 Apoptosis that occurs in response to a stimulus indicating endoplasmic reticulum (ER) stress. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.
GO:0070227 0 The process of apoptosis in a lymphocyte.
GO:0070782 0 A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an \

Process ID	Gene number	Process name
GO:0001552	0	Ovarian follicle demise mediated by apoptosis.
GO:0006919	0	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis.
GO:0006921	0	The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis.
GO:0006925	0	The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.
GO:0006926	0	The process of apoptosis in cells infected with a virus.
GO:0006927	0	The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm.
GO:0008633	0	The conversion of proteins that induce or sustain apoptosis to an active form.
GO:0008637	0	The morphological and physiological alterations undergone by mitochondria during apoptosis.
GO:0010657	0	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
GO:0030262	0	The morphological and physiological alterations undergone by the nucleus during apoptosis.
GO:0033028	0	The process of apoptosis in myeloid cells.
GO:0034349	0	The process of apoptosis in glial cells.
GO:0043276	0	Apoptosis triggered by inadequate or inappropriate adherence to substrate e.g. after disruption of the interactions between normal epithelial cells and the extracellular matrix.
GO:0045476	0	The process by which nurse cells undergo apoptosis. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptosis.
GO:0051402	0	The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
GO:0060561	0	The process of apoptosis that contributes to the shaping of an anatomical structure.
GO:0070059	0	Apoptosis that occurs in response to a stimulus indicating endoplasmic reticulum (ER) stress. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.
GO:0070227	0	The process of apoptosis in a lymphocyte.
GO:0070782	0	A phospholipid scrambling process that results in the appearance of phosphatidylserine on the outer leaflet of the plasma membrane of an apoptotic cell, which acts as an \

Comparison with co-expressed genes

Back to the CoP portal site

Back to the KAGIANA project homepage

Query process ID	GO:0006915
Process name	A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.
Organism	Oryza sativa

Biological process to genes

The upper GO terms

Process ID Gene number Process name GO:00125010Cell death resulting from activation of endogenous cellular processes.

The lower GO terms

Comparison with co-expressed genes

Process ID Gene number Process name
GO:0012501 0 Cell death resulting from activation of endogenous cellular processes.