Biological process to genes

Query process ID GO:0006886
Process name The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. H.G. Other DB
COs01g0265100AK067217.1-NTGB1 (Fragment)1e-90At2g47170ARF1A1CO.I.H.G.
COs01g0667600AK111561.1-Ras-related protein Rab11B1e-20At1g28550AtRABA1i (Arabidopsis Rab GTPase homolog A1i)O.I.H.G.
COs01g0813400AK065370.1-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.
COs03g0146000AK061250.1-RAB1X3e-9At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)O.I.H.G.
COs05g0155500AK100133.1-Importin alpha 2 subunit (NLS receptor)2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.
COs06g0114200---0--O.I.H.G.
COs07g0223100---0--O.I.H.G.
COs07g0620400AF050675.1-GTP-binding protein ATGB1 (GTP-bindingprotein-like) (At5g52210)7e-13At5g52210ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)O.I.H.G.
COs10g0580200AK070151.1-ADP-ribosylation factor (Fragment)1e-32At3g03120ATARFB1C (ADP-ribosylation factor B1C)O.I.H.G.
LOs01g0253300AB004660.1-Importin alpha 26e-24At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.
LOs01g0343200AK100070.1-Importin alpha 23e-10At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)O.I.H.G.
LOs01g0611100AB015971.1-GTP-binding nuclear protein RAN1B (Fragment)6e-109At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.
LOs01g0714900AK111495.1-RAB7A7e-22At4g09720Ras-related GTP-binding protein, putativeO.I.H.G.
LOs01g0963300AK067544.1-Syntaxin 61 (AtSYP61) (Osmotic stess-sensitivemutant 1)8e-6At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.
LOs02g0126800AK071820.1--1e-1At2g37390heavy-metal-associated domain-containing proteinO.I.H.G.
LOs02g0128600AK103009.1-ADP-ribosylation factor4e-14At3g03120ATARFB1C (ADP-ribosylation factor B1C)O.I.H.G.
LOs02g0178400AK063815.1-Protein transport protein SEC61 gamma subunit3e-13At4g24920protein transport protein SEC61 gamma subunit, putativeO.I.H.G.
LOs02g0209900---0--O.I.H.G.
LOs02g0217500AK058267.1-Pre-mRNA cleavage complex II Clp1 family protein1e-2At3g04680CLPS3 (CLP-SIMILAR PROTEIN 3)O.I.H.G.
LOs02g0273700AK102828.1-VHS domain containing protein2e-8At4g32760protein transporterO.I.H.G.
LOs02g0321800AK067188.1-B-cell receptor-associated 31-like family protein1e-1At5g56760ATSERAT1O.I.H.G.
LOs02g0586400L35845.1-Small GTP binding protein Rab27e-87At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.
LOs02g0620100AK061245.1-Mis12 family protein2e+0At2g27320unknown proteinO.I.H.G.
LOs02g06538009630.m04210-GTP-binding protein YPTM24e-24At4g17530ATRAB1CO.I.H.G.
LOs02g0690700AU030655-Clathrin adaptor complex, medium chain familyprotein3e+0At1g19770ATPUP14O.I.H.G.
LOs02g0697300AK066018.1-VHS domain containing protein2e-14At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.
LOs02g0699300AK067761.1-NTGB1 (Fragment)3e-32At3g03120ATARFB1C (ADP-ribosylation factor B1C)O.I.H.G.
LOs02g0732500AK111722.1-ADP-ribosylation factor-like protein2e-58At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)O.I.H.G.
LOs02g0768200AK070007.1-contains InterPro domain(s): IPR000348, IPR0090381e-1At1g21900emp24/gp25L/p24 family proteinO.I.H.G.
LOs03g0151900AB032761.1-Small GTP-binding protein1e-32At3g54840ARA6O.I.H.G.
LOs03g0376000AK059565.1-contains InterPro domain(s): IPR000348, IPR0090381e-1At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.
LOs03g0392300---0--O.I.H.G.
LOs03g0427200---0--O.I.H.G.
LOs03g0655200AK111247.1-Vesicle transport v-SNARE family protein7e-10At5g50440MEMB12 (MEMBRIN 12)O.I.H.G.
LOs03g0666500AK061203.1-Ras-related protein RHA19e-40At5g45130RHA1 (RAB HOMOLOG 1)O.I.H.G.
LOs03g0742800AK102769.1-COPII subunit Sec23 (Fragment)3e-8At5g43670transport protein, putativeO.I.H.G.
LOs03g0744800AK072451.1-contains InterPro domain(s): IPR000348, IPR0090382e-2At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.
LOs03g0783700AF443602.1-Clathrin assembly small subunit protein AP19(Clathrin assembly protein AP19, small subunit)5e-19At2g17380AP19O.I.H.G.
LOs03g0787000AK065950.1-Syntaxin1e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.
LOs03g0819900AY576526.1-Ethylene-responsive small GTP-binding protein4e-82At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)O.I.H.G.
LOs03g0823700AK061336.1-Ras-related protein Rab11C1e-42At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.H.G.
LOs03g0843100AK111499.1-Ras-related protein Rab-11B4e-11At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.
LOs04g0450500AK058975.1--3e+0At5g14345copper ion binding / electron carrierO.I.H.G.
LOs04g0470100AK059799.1-Small GTP binding protein Rab22e-31At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.
LOs04g0618500AK103625.1-Gamma-soluble NSF attachment protein (Gamma-SNAP)(N-ethylmaleimide- sensitive factor attachment protein,gamma)4e-5At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.H.G.
LOs04g0679100AK103034.1-Conserved hypothetical protein4e-2At3g44950glycine-rich proteinO.I.H.G.
LOs04g0682500AK121739.1-Peptidase T2, asparaginase 2 family protein8e-7At4g00590asparaginase 2 family proteinO.I.H.G.
LOs05g0105100AK102713.1-Ras-related protein Rab11C2e-18At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.
LOs05g0272900AK107093.1-B-cell receptor-associated 31-like family protein1e-1At1g11905-O.I.H.G.
LOs05g0341600AK111385.1-Ras-related protein Rab-212e-3At3g09910ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B)O.I.H.G.
LOs05g0383100AK121835.1-Clathrin adaptor complex, medium chain familyprotein3e-7At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.
LOs05g0429400AK069844.1-Cellular retinaldehyde binding/alpha-tocopheroltransport family protein2e-2At3g53235unknown proteinO.I.H.G.
LOs05g0461300AK111917.1-Ras-related protein Rab-8A (Oncogene c-mel)4e-48At3g53610ATRAB8O.I.H.G.
LOs05g0475300AK065069.1-VHS domain containing protein1e-6At5g01760VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.
LOs05g0516600AY226827.1-Small GTP binding protein1e-32At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)O.I.H.G.
LOs05g0516800AK060246.1-Ras-related protein RIC22e-25At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)O.I.H.G.
LOs05g0536900AK105140.1-Ras-related protein Rab78e-15At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)O.I.H.G.
LOs05g0564400AK073075.1-GTP-binding protein4e-45At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)O.I.H.G.
LOs05g0574500AB015972.1-GTP-binding nuclear protein RAN1B (Fragment)1e-112At5g20020RAN2O.I.H.G.
LOs06g0167100AK059117.1-Gamma-adaptin, C-terminal domain containingprotein2e-33At1g60070binding / clathrin binding / protein binding / protein transporterO.I.H.G.
LOs06g0168500AK100316.1-Syntaxin-like protein (Fragment)3e-6At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.
LOs06g0210100AK120435.1-contains InterPro domain(s): IPR000348, IPR0090388e-9At1g21900emp24/gp25L/p24 family proteinO.I.H.G.
LOs06g0225000AY620416.1-GTP-binding protein SAR1B1e-4At3g62560GTP-binding protein, putativeO.I.H.G.
LOs06g0332400AK101738.1-VHS domain containing protein3e-7At3g08790VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.
LOs06g0590500AK107080.1-Syntaxin 121 (AtSYP121) (Syntaxin-related proteinAt-Syr1)2e-4At4g03330SYP123 (SYNTAXIN OF PLANTS 123)O.I.H.G.
LOs06g0653900BI797949-SEC61 complex gamma subunit family protein4e-1At5g07440GDH2 (GLUTAMATE DEHYDROGENASE 2)O.I.H.G.
LOs06g0714600AU223447-Ras GTPase family protein1e-2At3g46830ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C)O.I.H.G.
LOs07g0164300AK099351.1-Syntaxin, N-terminal domain containing protein1e-11At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.H.G.
LOs07g0195100AK111552.1-Ras-related protein ARA-39e-37At5g03520ATRAB8CO.I.H.G.
LOs07g0239400AK068609.1-Ethylene-responsive small GTP-binding protein4e-76At5g59840Ras-related GTP-binding family proteinO.I.H.G.
LOs07g0409700AK072253.1-Mitochondrial import inner membrane translocase,subunit Tim44 family protein3e-7At2g20510ATTIM44-1O.I.H.G.
LOs07g0461500---0--O.I.H.G.
LOs07g0496000AK111986.1-Nt-rab6 protein9e-68At2g44610RAB6AO.I.H.G.
LOs07g0620300AK099000.1-Clathrin adaptor complex, medium chain familyprotein8e-23At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.
LOs07g0632700AK060066.1-contains InterPro domain(s): IPR000348, IPR0090383e-2At2g03290protein transmembrane transporterO.I.H.G.
LOs08g0109000AK107316.1-VHS domain containing protein5e-3At5g63640VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.
LOs08g0248900AK073613.1-ADP-ribosylation factor 32e-46At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.
LOs08g0282400AK100935.1-Alpha-SNAP (Fragment)4e-2At3g56190ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)O.I.H.G.
LOs08g0395300AU223384-Clathrin adaptor complex, small chain familyprotein1e-35At2g19790clathrin adaptor complex small chain family proteinO.I.H.G.
LOs08g0439600CA761215-Plant protein of unknown function DUF868 familyprotein2e+0At2g23755unknown proteinO.I.H.G.
LOs08g0440000AK102539.1-Vesicle transport v-SNARE family protein2e-3At1g15880GOS11 (golgi snare 11)O.I.H.G.
LOs08g0451000---0--O.I.H.G.
LOs08g0474700AK064878.1--1e-13At2g21630transport protein, putativeO.I.H.G.
LOs08g0480100AU173407-Signal recognition particle receptor protein(Fragment)1e-8At4g30600signal recognition particle receptor alpha subunit family proteinO.I.H.G.
LOs08g0525000AK103220.1-Ras GTPase family protein1e-41At2g43130ARA4O.I.H.G.
LOs08g0532900AK105383.1-contains InterPro domain(s): IPR000348, IPR0090382e+0At1g14020unknown proteinO.I.H.G.
LOs09g0327100AK071461.1--2e-31At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)O.I.H.G.
LOs09g0416700AK101300.1-Vesicle transport v-SNARE family protein4e-5At1g15880GOS11 (golgi snare 11)O.I.H.G.
LOs10g0368400AK120131.1-Clathrin adaptor complex, small chain familyprotein3e-42At2g19790clathrin adaptor complex small chain family proteinO.I.H.G.
LOs10g0456600AK102843.1-Ras GTPase family protein4e-2At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.H.G.
LOs10g0578000AK067871.1-contains InterPro domain(s): IPR002014, IPR0089427e-10At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.
LOs12g0207300AF443601.1-Clathrin coat assembly protein AP17 (Clathrin coatassociated protein AP17) (Plasma membrane adaptor AP-2 17kDa protein) (HA2 17 kDa subunit) (Clathrin assemblyprotein 2 small chain)9e-55At1g47830clathrin coat assembly protein, putativeO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:001503162The directed movement of proteins into, out of, within or between cells.
GO:00346130Any process by which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
GO:00469070The directed movement of substances within a cell.



The lower GO terms

Process ID Gene number Process name
GO:00000600The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope.
GO:000660510The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:00070380The directed movement of proteins imported into a cell by endocytosis to the vacuole.
GO:00158690The directed movement of protein-DNA complexes into, out of, within or between cells.
GO:00309700The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.
GO:00325270The directed movement of proteins from the endoplasmic reticulum.
GO:00325940The directed movement of a protein from one location to another within a lipid bilayer.
GO:00327790The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell, induced by an increase in copper ion concentration.
GO:00333690The directed movement of a protein to a location within a secretory granule in a mast cell.
GO:00333760The directed movement of a protein to a location within a secretory granule in a T cell.
GO:00430010The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.
GO:00482270Transport of a vesicle from the plasma membrane to the endosome.
GO:00517080The directed movement of an organism's proteins within a cell of a second organism, where the two organisms are in a symbiotic interaction.
GO:00650020The directed movement of proteins in a cell, from one side of a membrane to another.
GO:00708430The directed movement of misfolded proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.
GO:00708440The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.





Comparison with co-expressed genes



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