Biological process to genes

Query process ID GO:0006886
Process name The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g77140844050VPS45 (VACUOLAR PROTEIN SORTING 45)A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.O.I.H.G.
XAt5g66160836748JR700Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.O.I.H.G.
SAt1g08560837378SYP111 (SYNTAXIN OF PLANTS 111)member of SYP11 Gene FamilyO.I.H.G.
SAt1g11250837666SYP125 (SYNTAXIN OF PLANTS 125)member of SYP12 Gene FamilyO.I.H.G.
SAt1g16920838263ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.O.I.H.G.
SAt1g61290842423SYP124 (SYNTAXIN OF PLANTS 124)member of SYP12 Gene FamilyO.I.H.G.
SAt2g18260816342SYP112 (SYNTAXIN OF PLANTS 112)member of SYP11 Gene FamilyO.I.H.G.
SAt3g03800821141SYP131 (SYNTAXIN OF PLANTS 131)member of SYP13 Gene FamilyO.I.H.G.
SAt3g05710819740SYP43 (SYNTAXIN OF PLANTS 43)member of SYP4 Gene FamilyO.I.H.G.
SAt3g09740820132SYP71 (SYNTAXIN OF PLANTS 71)syntaxin of plants 71 (SYP71)O.I.H.G.
SAt3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.O.I.H.G.
SAt3g24350822024SYP32 (SYNTAXIN OF PLANTS 32)member of Glycoside Hydrolase Family 17O.I.H.G.
SAt3g45280823666SYP72 (SYNTAXIN OF PLANTS 72)syntaxin of plants 72 (SYP72)O.I.H.G.
SAt3g52400824405SYP122 (SYNTAXIN OF PLANTS 122)syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathwayO.I.H.G.
SAt3g61450825318SYP73 (SYNTAXIN OF PLANTS 73)syntaxin of plants 73 (SYP73)O.I.H.G.
SAt4g02195827505SYP42 (SYNTAXIN OF PLANTS 42)member of SYP4 Gene FamilyO.I.H.G.
SAt4g03330827970SYP123 (SYNTAXIN OF PLANTS 123)member of SYP12 Gene FamilyO.I.H.G.
SAt4g17730827494SYP23 (SYNTAXIN OF PLANTS 23)member of SYP2 Gene FamilyO.I.H.G.
SAt4g21160827864ZACADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.O.I.H.G.
SAt5g05760830461SYP31 (SYNTAXIN OF PLANTS 31)A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesisO.I.H.G.
SAt5g08080830702SYP132 (SYNTAXIN OF PLANTS 132)member of SYP13 Gene FamilyO.I.H.G.
SAt5g16830831546SYP21 (SYNTAXIN OF PLANTS 21)member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.O.I.H.G.
SAt5g26980832756SYP41 (SYNTAXIN OF PLANTS 41)member of SYP4 Gene FamilyO.I.H.G.
SAt5g46860834730VAM3Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.O.I.H.G.
CAt1g02690839517IMPA-6 (IMPORTIN ALPHA ISOFORM 6)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt1g06210837130VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBO.I.H.G.
CAt1g09270837448IMPA-4 (IMPORTIN ALPHA ISOFORM 4)Protein interacts with Agrobacterium proteins VirD2 and VirE2.O.I.H.G.
CAt1g09580837485emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOPO.I.H.G.
CAt1g10730837616clathrin adaptor complexes medium subunit family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOPO.I.H.G.
CAt1g14010837961emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPOO.I.H.G.
CAt1g21380838737VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBO.I.H.G.
CAt1g21650838767ATP binding / protein bindingF:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast, membrane;OBPMO.I.H.G.
CAt1g21900838792emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOPO.I.H.G.
CAt1g26690839210emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPOO.I.H.G.
CAt1g28490839749SYP61 (SYNTAXIN OF PLANTS 61)Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.O.I.H.G.
CAt1g32880840182importin alpha-1 subunit, putativeF:protein transporter activity, binding;P:intracellular protein transport;C:cellular_component unknown;MPFOO.I.H.G.
CAt1g47830841199clathrin coat assembly protein, putativeF:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOPO.I.H.G.
CAt1g48550841276vacuolar protein sorting-associated protein 26 family protein / VPS26 family proteinF:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOPFO.I.H.G.
CAt1g56590842113clathrin adaptor complexes medium subunit family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOPO.I.H.G.
CAt1g57620842138emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOPO.I.H.G.
CAt1g60780842372HAP13 (HAPLESS 13)F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOPO.I.H.G.
CAt1g60970842388clathrin adaptor complex small chain family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFOO.I.H.G.
CAt1g69460843278emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPOO.I.H.G.
CAt1g75850843918VPS35B (VPS35 HOMOLOG B)F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPBO.I.H.G.
CAt1g76970844033VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBO.I.H.G.
CAt2g03290814858protein transmembrane transporterF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPOO.I.H.G.
CAt2g14740815962ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)F:calcium ion binding;P:intracellular protein transport, protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex, membrane;MOPBFAO.I.H.G.
CAt2g17380816245AP19Encodes clathrin assembly protein AP19.O.I.H.G.
CAt2g17790816289VPS35A (VPS35 HOMOLOG A)F:molecular_function unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPO.I.H.G.
CAt2g19790816498clathrin adaptor complex small chain family proteinF:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MOFPO.I.H.G.
CAt2g38410818422VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVAO.I.H.G.
CAt3g01340821216protein transport protein SEC13 family protein / WD-40 repeat family proteinF:nucleotide binding;P:intracellular protein transport, membrane budding;C:cellular_component unknown;MFBOPAO.I.H.G.
CAt3g05720819741IMPA-7 (IMPORTIN ALPHA ISOFORM 7)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt3g06720819857IMPA-1 (IMPORTIN ALPHA ISOFORM 1)Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt3g07680819959emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPOO.I.H.G.
CAt3g08790820026VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFVOPBO.I.H.G.
CAt3g09800820138protein bindingF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFOO.I.H.G.
CAt3g10780820247emp24/gp25L/p24 family proteinF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPOO.I.H.G.
CAt3g29070822551protein transmembrane transporterF:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:mitochondrion, integral to membrane, membrane;MFPOO.I.H.G.
CAt3g48570824017protein transport protein SEC61 gamma subunit, putativeF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein targeting, protein transport;C:plasma membrane;MFOPO.I.H.G.
CAt3g50860824250clathrin adaptor complex small chain family proteinF:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOPO.I.H.G.
CAt3g51310824294VPS35C (VPS35 HOMOLOG C)Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.O.I.H.G.
CAt4g01800827922preprotein translocase secA subunit, putativeF:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast stroma, chloroplast, chloroplast envelope;OBPMAO.I.H.G.
CAt4g02150827472MOS6 (MODIFIER OF SNC1, 6)Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt4g08520826411clathrin adaptor complex small chain family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, plasma membrane;MPFOO.I.H.G.
CAt4g16143827302IMPA-2 (IMPORTIN ALPHA ISOFORM 2)Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt4g20110827757vacuolar sorting receptor, putativeF:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFAO.I.H.G.
CAt4g20410827789GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family.O.I.H.G.
CAt4g24550828557clathrin adaptor complexes medium subunit family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat, clathrin adaptor complex;MFOPO.I.H.G.
CAt4g24920828594protein transport protein SEC61 gamma subunit, putativeF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPAO.I.H.G.
CAt4g27690828883VPS26B (VACUOLAR PROTEIN SORTING 26B)F:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOFPO.I.H.G.
CAt4g32760829412protein transporterF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVAO.I.H.G.
CAt4g35410829694clathrin adaptor complex small chain family proteinF:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex;MFOPO.I.H.G.
CAt5g01760831682VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBVO.I.H.G.
CAt5g16880831551VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPOO.I.H.G.
CAt5g46630834706clathrin adaptor complexes medium subunit family proteinclathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexesO.I.H.G.
CAt5g49310834991IMPA-5 (IMPORTIN ALPHA ISOFORM 5)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt5g50460835114protein transport protein SEC61 gamma subunit, putativeF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPAO.I.H.G.
CAt5g52000835275IMPA-8 (IMPORTIN ALPHA ISOFORM 8)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
CAt5g53530835435VPS26A (VACUOLAR PROTEIN SORTING 26A)Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.O.I.H.G.
CAt5g63640836484VHS domain-containing protein / GAT domain-containing proteinF:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPOBO.I.H.G.
LAt1g02620839269GTP-binding protein (SAR1A)F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOFO.I.H.G.
LAt1g07410837253ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:endosome, plasma membrane, cell plate;MOFPBAVO.I.H.G.
LAt1g08190837340vacuolar assembly protein, putative (VPS41)F:protein binding, binding, nucleotide binding, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport;C:unknown;MOFPVBAO.I.H.G.
LAt1g09180837438ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.O.I.H.G.
LAt1g11905837739-F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;PO.I.H.G.
LAt1g18200838399AtRABA6b (Arabidopsis Rab GTPase homolog A6b)F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:intracellular;MOFPBAVO.I.H.G.
LAt1g22740838880RABG3BGTP-binding protein Rab7O.I.H.G.
LAt1g23940839005adaptin family proteinF:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;MOFPO.I.H.G.
LAt1g26170839158binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPOO.I.H.G.
LAt1g31730840060epsilon-adaptin, putativeF:protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;OMFPBVO.I.H.G.
LAt1g48240841244ATNPSN12member of NPSN Gene FamilyO.I.H.G.
LAt1g48760841298delta-ADR (delta-adaptin)F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus;MOFPBO.I.H.G.
LAt1g51740841599SYP81 (SYNTAXIN OF PLANTS 81)member of SYP8 Gene FamilyO.I.H.G.
LAt1g52360841666coatomer protein complex, subunit beta 2 (beta prime), putativeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPAVO.I.H.G.
LAt1g60070842301binding / clathrin binding / protein binding / protein transporterF:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex;MFOPBO.I.H.G.
LAt1g62020842497coatomer protein complex, subunit alpha, putativeF:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane;MFOBPAO.I.H.G.
LAt1g64220842727TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;PO.I.H.G.
LAt1g72750843607ATTIM23-2F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport;C:mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane;MFPOO.I.H.G.
LAt1g73430843677sec34-like family proteinF:molecular_function unknown;P:intracellular protein transport;C:chloroplast, membrane, cis-Golgi network;MFOPBO.I.H.G.
LAt1g79990844339protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MFOBPAVO.I.H.G.
LAt2g16200816117protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, Golgi-associated vesicle;POO.I.H.G.
LAt2g20760816605protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane;MBOPFO.I.H.G.
LAt2g20790816608protein bindingF:protein binding;P:intracellular protein transport, vesicle-mediated transport;C:clathrin adaptor complex;MOFPO.I.H.G.
LAt2g21390816678coatomer protein complex, subunit alpha, putativeF:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane;MFOBPAO.I.H.G.
LAt2g21630816701transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPO.I.H.G.
LAt2g27460817291sec23/sec24 transport family proteinF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPBO.I.H.G.
LAt2g36900818264MEMB11 (MEMBRIN 11)member of Membrin Gene FamilyO.I.H.G.
LAt2g40060818594protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast envelope;MOPFBAVO.I.H.G.
LAt2g46520819263cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putativeF:protein transporter activity, importin-alpha export receptor activity, binding;P:intracellular protein transport, cell proliferation, protein import into nucleus, docking;C:nucleus, nuclear pore, membrane, cytoplasm;MFOPO.I.H.G.
LAt3g06540819832GDP dissociation inhibitor family protein / Rab GTPase activator family proteinF:RAB GDP-dissociation inhibitor activity;P:intracellular protein transport, regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBO.I.H.G.
LAt3g07100819896protein transport protein Sec24, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFBOPVAO.I.H.G.
LAt3g07190819906-F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBPFAVO.I.H.G.
LAt3g08530820001clathrin heavy chain, putativeF:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast, membrane;MOFPBO.I.H.G.
LAt3g089433768764binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasmO.I.H.G.
LAt3g089473768765binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasmO.I.H.G.
LAt3g08960820048binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOPO.I.H.G.
LAt3g11130820284clathrin heavy chain, putativeF:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, vacuole;MOFPBO.I.H.G.
LAt3g15980820842coatomer protein complex, subunit beta 2 (beta prime), putativeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPAO.I.H.G.
LAt3g16270820873-F:unknown;P:intracellular protein transport;C:membrane;MOPBFO.I.H.G.
LAt3g17340820997binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOFVPBAO.I.H.G.
LAt3g17440821008NPSN13 (NOVEL PLANT SNARE 13)member of NPSN Gene FamilyO.I.H.G.
LAt3g20450821590-F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;PO.I.H.G.
LAt3g23660821946transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPO.I.H.G.
LAt3g27325822352hydrolase, acting on ester bondsF:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:endoplasmic reticulum, plasma membrane;FMPBOO.I.H.G.
LAt3g27530822375GC6 (golgin candidate 6)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.O.I.H.G.
LAt3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.O.I.H.G.
LAt3g51890824352protein binding / structural moleculeF:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit;MPFOBO.I.H.G.
LAt3g55480824714adaptin family proteinF:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system;BMFOPO.I.H.G.
LAt3g56190824785ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in ArabidopsisO.I.H.G.
LAt3g56450824812ALPHA-SNAP1member of alpha-SNAP Gene FamilyO.I.H.G.
LAt3g59020825071binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;OMFBPVAO.I.H.G.
LAt3g62560825430GTP-binding protein, putativeF:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MOFPBAO.I.H.G.
LAt4g01810828105protein transport protein-relatedF:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;PMOFBVAO.I.H.G.
LAt4g02080827368ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.O.I.H.G.
LAt4g09720826558Ras-related GTP-binding protein, putativeF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBAVO.I.H.G.
LAt4g11380826741beta-adaptin, putativeF:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFPBAO.I.H.G.
LAt4g14160827055transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPO.I.H.G.
LAt4g23460828445beta-adaptin, putativeF:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MFOPBAO.I.H.G.
LAt4g27640828875importin beta-2 subunit family proteinF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOPBO.I.H.G.
LAt4g30600829183signal recognition particle receptor alpha subunit family proteinF:in 6 functions;P:intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting;BOMFAPVO.I.H.G.
LAt4g31480829275coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeF:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MOFPO.I.H.G.
LAt4g31490829276coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeF:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane;MOFPO.I.H.G.
LAt4g32640829399protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOBPVAO.I.H.G.
LAt4g34450829596coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeF:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:chloroplast, membrane;MFOPBO.I.H.G.
LAt5g05010830383clathrin adaptor complexes medium subunit-relatedF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane;MFOPBO.I.H.G.
LAt5g06120830499Ran-binding protein, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOPO.I.H.G.
LAt5g11490831021adaptin family proteinF:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOPO.I.H.G.
LAt5g17670831633hydrolase, acting on ester bondsF:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOPO.I.H.G.
LAt5g22770832340alpha-ADR (alpha-adaptin)F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane, membrane;MOFPO.I.H.G.
LAt5g22780832341adaptin family proteinF:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFPO.I.H.G.
LAt5g273955008229P-P-bond-hydrolysis-driven protein transmembrane transporterF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial inner membrane presequence translocase complex;BMOPO.I.H.G.
LAt5g41685834171mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1)F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;PFO.I.H.G.
LAt5g42570834264-F:molecular_function unknown;P:intracellular protein transport;C:endoplasmic reticulum, plasma membrane;MPOFABO.I.H.G.
LAt5g43670834387transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPO.I.H.G.
LAt5g48660834924-F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBFPAVO.I.H.G.
LAt5g53480835429importin beta-2, putativeF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, chloroplast, nuclear pore, cytoplasm;MFOPO.I.H.G.
LAt5g55080835599AtRAN4 (Ras-related nuclear protein 4)A member of RAN GTPase gene family.O.I.H.G.
LAt5g62600836381transportin-SR-relatedF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPOBO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:0015031117The directed movement of proteins into, out of, within or between cells.
GO:00346132Any process by which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
GO:00469078The directed movement of substances within a cell.



The lower GO terms

Process ID Gene number Process name
GO:00000603The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope.
GO:00066059The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:00070380The directed movement of proteins imported into a cell by endocytosis to the vacuole.
GO:00158690The directed movement of protein-DNA complexes into, out of, within or between cells.
GO:00309700The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.
GO:00325271The directed movement of proteins from the endoplasmic reticulum.
GO:00325940The directed movement of a protein from one location to another within a lipid bilayer.
GO:00327790The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell, induced by an increase in copper ion concentration.
GO:00333690The directed movement of a protein to a location within a secretory granule in a mast cell.
GO:00333760The directed movement of a protein to a location within a secretory granule in a T cell.
GO:00430010The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.
GO:00482271Transport of a vesicle from the plasma membrane to the endosome.
GO:00517080The directed movement of an organism's proteins within a cell of a second organism, where the two organisms are in a symbiotic interaction.
GO:00650020The directed movement of proteins in a cell, from one side of a membrane to another.
GO:00708430The directed movement of misfolded proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.
GO:00708440The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.





Comparison with co-expressed genes



Back to the CoP portal site

Back to the KAGIANA project homepage