CoP: Co-expressed Biological Processes

Biological process to genes

Query process ID GO:0006886

Process name The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
X At1g77140 844050 VPS45 (VACUOLAR PROTEIN SORTING 45) A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face. O.I. H.G.
X At5g66160 836748 JR700 Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles. O.I. H.G.
S At1g08560 837378 SYP111 (SYNTAXIN OF PLANTS 111) member of SYP11 Gene Family O.I. H.G.
S At1g11250 837666 SYP125 (SYNTAXIN OF PLANTS 125) member of SYP12 Gene Family O.I. H.G.
S At1g16920 838263 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B) small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking. O.I. H.G.
S At1g61290 842423 SYP124 (SYNTAXIN OF PLANTS 124) member of SYP12 Gene Family O.I. H.G.
S At2g18260 816342 SYP112 (SYNTAXIN OF PLANTS 112) member of SYP11 Gene Family O.I. H.G.
S At3g03800 821141 SYP131 (SYNTAXIN OF PLANTS 131) member of SYP13 Gene Family O.I. H.G.
S At3g05710 819740 SYP43 (SYNTAXIN OF PLANTS 43) member of SYP4 Gene Family O.I. H.G.
S At3g09740 820132 SYP71 (SYNTAXIN OF PLANTS 71) syntaxin of plants 71 (SYP71) O.I. H.G.
S At3g11820 820355 SYP121 (SYNTAXIN OF PLANTS 121) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. O.I. H.G.
S At3g24350 822024 SYP32 (SYNTAXIN OF PLANTS 32) member of Glycoside Hydrolase Family 17 O.I. H.G.
S At3g45280 823666 SYP72 (SYNTAXIN OF PLANTS 72) syntaxin of plants 72 (SYP72) O.I. H.G.
S At3g52400 824405 SYP122 (SYNTAXIN OF PLANTS 122) syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway O.I. H.G.
S At3g61450 825318 SYP73 (SYNTAXIN OF PLANTS 73) syntaxin of plants 73 (SYP73) O.I. H.G.
S At4g02195 827505 SYP42 (SYNTAXIN OF PLANTS 42) member of SYP4 Gene Family O.I. H.G.
S At4g03330 827970 SYP123 (SYNTAXIN OF PLANTS 123) member of SYP12 Gene Family O.I. H.G.
S At4g17730 827494 SYP23 (SYNTAXIN OF PLANTS 23) member of SYP2 Gene Family O.I. H.G.
S At4g21160 827864 ZAC ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. O.I. H.G.
S At5g05760 830461 SYP31 (SYNTAXIN OF PLANTS 31) A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis O.I. H.G.
S At5g08080 830702 SYP132 (SYNTAXIN OF PLANTS 132) member of SYP13 Gene Family O.I. H.G.
S At5g16830 831546 SYP21 (SYNTAXIN OF PLANTS 21) member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane. O.I. H.G.
S At5g26980 832756 SYP41 (SYNTAXIN OF PLANTS 41) member of SYP4 Gene Family O.I. H.G.
S At5g46860 834730 VAM3 Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164�220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. O.I. H.G.
C At1g02690 839517 IMPA-6 (IMPORTIN ALPHA ISOFORM 6) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At1g06210 837130 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB O.I. H.G.
C At1g09270 837448 IMPA-4 (IMPORTIN ALPHA ISOFORM 4) Protein interacts with Agrobacterium proteins VirD2 and VirE2. O.I. H.G.
C At1g09580 837485 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP O.I. H.G.
C At1g10730 837616 clathrin adaptor complexes medium subunit family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G.
C At1g14010 837961 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPO O.I. H.G.
C At1g21380 838737 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB O.I. H.G.
C At1g21650 838767 ATP binding / protein binding F:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast, membrane;OBPM O.I. H.G.
C At1g21900 838792 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP O.I. H.G.
C At1g26690 839210 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO O.I. H.G.
C At1g28490 839749 SYP61 (SYNTAXIN OF PLANTS 61) Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. O.I. H.G.
C At1g32880 840182 importin alpha-1 subunit, putative F:protein transporter activity, binding;P:intracellular protein transport;C:cellular_component unknown;MPFO O.I. H.G.
C At1g47830 841199 clathrin coat assembly protein, putative F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP O.I. H.G.
C At1g48550 841276 vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein F:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOPF O.I. H.G.
C At1g56590 842113 clathrin adaptor complexes medium subunit family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G.
C At1g57620 842138 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP O.I. H.G.
C At1g60780 842372 HAP13 (HAPLESS 13) F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G.
C At1g60970 842388 clathrin adaptor complex small chain family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFO O.I. H.G.
C At1g69460 843278 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPO O.I. H.G.
C At1g75850 843918 VPS35B (VPS35 HOMOLOG B) F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPB O.I. H.G.
C At1g76970 844033 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB O.I. H.G.
C At2g03290 814858 protein transmembrane transporter F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO O.I. H.G.
C At2g14740 815962 ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3) F:calcium ion binding;P:intracellular protein transport, protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex, membrane;MOPBFA O.I. H.G.
C At2g17380 816245 AP19 Encodes clathrin assembly protein AP19. O.I. H.G.
C At2g17790 816289 VPS35A (VPS35 HOMOLOG A) F:molecular_function unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOP O.I. H.G.
C At2g19790 816498 clathrin adaptor complex small chain family protein F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MOFP O.I. H.G.
C At2g38410 818422 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVA O.I. H.G.
C At3g01340 821216 protein transport protein SEC13 family protein / WD-40 repeat family protein F:nucleotide binding;P:intracellular protein transport, membrane budding;C:cellular_component unknown;MFBOPA O.I. H.G.
C At3g05720 819741 IMPA-7 (IMPORTIN ALPHA ISOFORM 7) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At3g06720 819857 IMPA-1 (IMPORTIN ALPHA ISOFORM 1) Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At3g07680 819959 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO O.I. H.G.
C At3g08790 820026 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFVOPB O.I. H.G.
C At3g09800 820138 protein binding F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFO O.I. H.G.
C At3g10780 820247 emp24/gp25L/p24 family protein F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO O.I. H.G.
C At3g29070 822551 protein transmembrane transporter F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:mitochondrion, integral to membrane, membrane;MFPO O.I. H.G.
C At3g48570 824017 protein transport protein SEC61 gamma subunit, putative F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein targeting, protein transport;C:plasma membrane;MFOP O.I. H.G.
C At3g50860 824250 clathrin adaptor complex small chain family protein F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP O.I. H.G.
C At3g51310 824294 VPS35C (VPS35 HOMOLOG C) Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. O.I. H.G.
C At4g01800 827922 preprotein translocase secA subunit, putative F:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast stroma, chloroplast, chloroplast envelope;OBPMA O.I. H.G.
C At4g02150 827472 MOS6 (MODIFIER OF SNC1, 6) Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At4g08520 826411 clathrin adaptor complex small chain family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, plasma membrane;MPFO O.I. H.G.
C At4g16143 827302 IMPA-2 (IMPORTIN ALPHA ISOFORM 2) Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At4g20110 827757 vacuolar sorting receptor, putative F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA O.I. H.G.
C At4g20410 827789 GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN) Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family. O.I. H.G.
C At4g24550 828557 clathrin adaptor complexes medium subunit family protein F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat, clathrin adaptor complex;MFOP O.I. H.G.
C At4g24920 828594 protein transport protein SEC61 gamma subunit, putative F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPA O.I. H.G.
C At4g27690 828883 VPS26B (VACUOLAR PROTEIN SORTING 26B) F:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOFP O.I. H.G.
C At4g32760 829412 protein transporter F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVA O.I. H.G.
C At4g35410 829694 clathrin adaptor complex small chain family protein F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex;MFOP O.I. H.G.
C At5g01760 831682 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBV O.I. H.G.
C At5g16880 831551 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPO O.I. H.G.
C At5g46630 834706 clathrin adaptor complexes medium subunit family protein clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes O.I. H.G.
C At5g49310 834991 IMPA-5 (IMPORTIN ALPHA ISOFORM 5) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At5g50460 835114 protein transport protein SEC61 gamma subunit, putative F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPA O.I. H.G.
C At5g52000 835275 IMPA-8 (IMPORTIN ALPHA ISOFORM 8) Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. O.I. H.G.
C At5g53530 835435 VPS26A (VACUOLAR PROTEIN SORTING 26A) Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. O.I. H.G.
C At5g63640 836484 VHS domain-containing protein / GAT domain-containing protein F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPOB O.I. H.G.
L At1g02620 839269 GTP-binding protein (SAR1A) F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOF O.I. H.G.
L At1g07410 837253 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B) F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:endosome, plasma membrane, cell plate;MOFPBAV O.I. H.G.
L At1g08190 837340 vacuolar assembly protein, putative (VPS41) F:protein binding, binding, nucleotide binding, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport;C:unknown;MOFPVBA O.I. H.G.
L At1g09180 837438 ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. H.G.
L At1g11905 837739 - F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;P O.I. H.G.
L At1g18200 838399 AtRABA6b (Arabidopsis Rab GTPase homolog A6b) F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:intracellular;MOFPBAV O.I. H.G.
L At1g22740 838880 RABG3B GTP-binding protein Rab7 O.I. H.G.
L At1g23940 839005 adaptin family protein F:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;MOFP O.I. H.G.
L At1g26170 839158 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPO O.I. H.G.
L At1g31730 840060 epsilon-adaptin, putative F:protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;OMFPBV O.I. H.G.
L At1g48240 841244 ATNPSN12 member of NPSN Gene Family O.I. H.G.
L At1g48760 841298 delta-ADR (delta-adaptin) F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus;MOFPB O.I. H.G.
L At1g51740 841599 SYP81 (SYNTAXIN OF PLANTS 81) member of SYP8 Gene Family O.I. H.G.
L At1g52360 841666 coatomer protein complex, subunit beta 2 (beta prime), putative F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPAV O.I. H.G.
L At1g60070 842301 binding / clathrin binding / protein binding / protein transporter F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex;MFOPB O.I. H.G.
L At1g62020 842497 coatomer protein complex, subunit alpha, putative F:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane;MFOBPA O.I. H.G.
L At1g64220 842727 TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2) F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;P O.I. H.G.
L At1g72750 843607 ATTIM23-2 F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport;C:mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane;MFPO O.I. H.G.
L At1g73430 843677 sec34-like family protein F:molecular_function unknown;P:intracellular protein transport;C:chloroplast, membrane, cis-Golgi network;MFOPB O.I. H.G.
L At1g79990 844339 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MFOBPAV O.I. H.G.
L At2g16200 816117 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, Golgi-associated vesicle;PO O.I. H.G.
L At2g20760 816605 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane;MBOPF O.I. H.G.
L At2g20790 816608 protein binding F:protein binding;P:intracellular protein transport, vesicle-mediated transport;C:clathrin adaptor complex;MOFP O.I. H.G.
L At2g21390 816678 coatomer protein complex, subunit alpha, putative F:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane;MFOBPA O.I. H.G.
L At2g21630 816701 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP O.I. H.G.
L At2g27460 817291 sec23/sec24 transport family protein F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPB O.I. H.G.
L At2g36900 818264 MEMB11 (MEMBRIN 11) member of Membrin Gene Family O.I. H.G.
L At2g40060 818594 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast envelope;MOPFBAV O.I. H.G.
L At2g46520 819263 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative F:protein transporter activity, importin-alpha export receptor activity, binding;P:intracellular protein transport, cell proliferation, protein import into nucleus, docking;C:nucleus, nuclear pore, membrane, cytoplasm;MFOP O.I. H.G.
L At3g06540 819832 GDP dissociation inhibitor family protein / Rab GTPase activator family protein F:RAB GDP-dissociation inhibitor activity;P:intracellular protein transport, regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPB O.I. H.G.
L At3g07100 819896 protein transport protein Sec24, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFBOPVA O.I. H.G.
L At3g07190 819906 - F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBPFAV O.I. H.G.
L At3g08530 820001 clathrin heavy chain, putative F:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast, membrane;MOFPB O.I. H.G.
L At3g08943 3768764 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm O.I. H.G.
L At3g08947 3768765 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm O.I. H.G.
L At3g08960 820048 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOP O.I. H.G.
L At3g11130 820284 clathrin heavy chain, putative F:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, vacuole;MOFPB O.I. H.G.
L At3g15980 820842 coatomer protein complex, subunit beta 2 (beta prime), putative F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPA O.I. H.G.
L At3g16270 820873 - F:unknown;P:intracellular protein transport;C:membrane;MOPBF O.I. H.G.
L At3g17340 820997 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOFVPBA O.I. H.G.
L At3g17440 821008 NPSN13 (NOVEL PLANT SNARE 13) member of NPSN Gene Family O.I. H.G.
L At3g20450 821590 - F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;P O.I. H.G.
L At3g23660 821946 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP O.I. H.G.
L At3g27325 822352 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:endoplasmic reticulum, plasma membrane;FMPBO O.I. H.G.
L At3g27530 822375 GC6 (golgin candidate 6) This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein. O.I. H.G.
L At3g49860 824148 ATARLA1B (ADP-ribosylation factor-like A1B) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. H.G.
L At3g51890 824352 protein binding / structural molecule F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit;MPFOB O.I. H.G.
L At3g55480 824714 adaptin family protein F:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system;BMFOP O.I. H.G.
L At3g56190 824785 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis O.I. H.G.
L At3g56450 824812 ALPHA-SNAP1 member of alpha-SNAP Gene Family O.I. H.G.
L At3g59020 825071 binding / protein transporter F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;OMFBPVA O.I. H.G.
L At3g62560 825430 GTP-binding protein, putative F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MOFPBA O.I. H.G.
L At4g01810 828105 protein transport protein-related F:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;PMOFBVA O.I. H.G.
L At4g02080 827368 ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. H.G.
L At4g09720 826558 Ras-related GTP-binding protein, putative F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBAV O.I. H.G.
L At4g11380 826741 beta-adaptin, putative F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFPBA O.I. H.G.
L At4g14160 827055 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP O.I. H.G.
L At4g23460 828445 beta-adaptin, putative F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MFOPBA O.I. H.G.
L At4g27640 828875 importin beta-2 subunit family protein F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOPB O.I. H.G.
L At4g30600 829183 signal recognition particle receptor alpha subunit family protein F:in 6 functions;P:intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting;BOMFAPV O.I. H.G.
L At4g31480 829275 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MOFP O.I. H.G.
L At4g31490 829276 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane;MOFP O.I. H.G.
L At4g32640 829399 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOBPVA O.I. H.G.
L At4g34450 829596 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:chloroplast, membrane;MFOPB O.I. H.G.
L At5g05010 830383 clathrin adaptor complexes medium subunit-related F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane;MFOPB O.I. H.G.
L At5g06120 830499 Ran-binding protein, putative F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOP O.I. H.G.
L At5g11490 831021 adaptin family protein F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOP O.I. H.G.
L At5g17670 831633 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOP O.I. H.G.
L At5g22770 832340 alpha-ADR (alpha-adaptin) F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane, membrane;MOFP O.I. H.G.
L At5g22780 832341 adaptin family protein F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFP O.I. H.G.
L At5g27395 5008229 P-P-bond-hydrolysis-driven protein transmembrane transporter F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial inner membrane presequence translocase complex;BMOP O.I. H.G.
L At5g41685 834171 mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1) F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;PF O.I. H.G.
L At5g42570 834264 - F:molecular_function unknown;P:intracellular protein transport;C:endoplasmic reticulum, plasma membrane;MPOFAB O.I. H.G.
L At5g43670 834387 transport protein, putative F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP O.I. H.G.
L At5g48660 834924 - F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBFPAV O.I. H.G.
L At5g53480 835429 importin beta-2, putative F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, chloroplast, nuclear pore, cytoplasm;MFOP O.I. H.G.
L At5g55080 835599 AtRAN4 (Ras-related nuclear protein 4) A member of RAN GTPase gene family. O.I. H.G.
L At5g62600 836381 transportin-SR-related F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPOB O.I. H.G.

ECC	Gene ID	Repr. ID	Gene name	Functional description	O.I.	H.G.
X	At1g77140	844050	VPS45 (VACUOLAR PROTEIN SORTING 45)	A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.	O.I.	H.G.
X	At5g66160	836748	JR700	Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.	O.I.	H.G.
S	At1g08560	837378	SYP111 (SYNTAXIN OF PLANTS 111)	member of SYP11 Gene Family	O.I.	H.G.
S	At1g11250	837666	SYP125 (SYNTAXIN OF PLANTS 125)	member of SYP12 Gene Family	O.I.	H.G.
S	At1g16920	838263	ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)	small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.	O.I.	H.G.
S	At1g61290	842423	SYP124 (SYNTAXIN OF PLANTS 124)	member of SYP12 Gene Family	O.I.	H.G.
S	At2g18260	816342	SYP112 (SYNTAXIN OF PLANTS 112)	member of SYP11 Gene Family	O.I.	H.G.
S	At3g03800	821141	SYP131 (SYNTAXIN OF PLANTS 131)	member of SYP13 Gene Family	O.I.	H.G.
S	At3g05710	819740	SYP43 (SYNTAXIN OF PLANTS 43)	member of SYP4 Gene Family	O.I.	H.G.
S	At3g09740	820132	SYP71 (SYNTAXIN OF PLANTS 71)	syntaxin of plants 71 (SYP71)	O.I.	H.G.
S	At3g11820	820355	SYP121 (SYNTAXIN OF PLANTS 121)	Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.	O.I.	H.G.
S	At3g24350	822024	SYP32 (SYNTAXIN OF PLANTS 32)	member of Glycoside Hydrolase Family 17	O.I.	H.G.
S	At3g45280	823666	SYP72 (SYNTAXIN OF PLANTS 72)	syntaxin of plants 72 (SYP72)	O.I.	H.G.
S	At3g52400	824405	SYP122 (SYNTAXIN OF PLANTS 122)	syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway	O.I.	H.G.
S	At3g61450	825318	SYP73 (SYNTAXIN OF PLANTS 73)	syntaxin of plants 73 (SYP73)	O.I.	H.G.
S	At4g02195	827505	SYP42 (SYNTAXIN OF PLANTS 42)	member of SYP4 Gene Family	O.I.	H.G.
S	At4g03330	827970	SYP123 (SYNTAXIN OF PLANTS 123)	member of SYP12 Gene Family	O.I.	H.G.
S	At4g17730	827494	SYP23 (SYNTAXIN OF PLANTS 23)	member of SYP2 Gene Family	O.I.	H.G.
S	At4g21160	827864	ZAC	ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.	O.I.	H.G.
S	At5g05760	830461	SYP31 (SYNTAXIN OF PLANTS 31)	A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis	O.I.	H.G.
S	At5g08080	830702	SYP132 (SYNTAXIN OF PLANTS 132)	member of SYP13 Gene Family	O.I.	H.G.
S	At5g16830	831546	SYP21 (SYNTAXIN OF PLANTS 21)	member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.	O.I.	H.G.
S	At5g26980	832756	SYP41 (SYNTAXIN OF PLANTS 41)	member of SYP4 Gene Family	O.I.	H.G.
S	At5g46860	834730	VAM3	Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164�220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.	O.I.	H.G.
C	At1g02690	839517	IMPA-6 (IMPORTIN ALPHA ISOFORM 6)	Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At1g06210	837130	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB	O.I.	H.G.
C	At1g09270	837448	IMPA-4 (IMPORTIN ALPHA ISOFORM 4)	Protein interacts with Agrobacterium proteins VirD2 and VirE2.	O.I.	H.G.
C	At1g09580	837485	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP	O.I.	H.G.
C	At1g10730	837616	clathrin adaptor complexes medium subunit family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.
C	At1g14010	837961	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPO	O.I.	H.G.
C	At1g21380	838737	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB	O.I.	H.G.
C	At1g21650	838767	ATP binding / protein binding	F:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast, membrane;OBPM	O.I.	H.G.
C	At1g21900	838792	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP	O.I.	H.G.
C	At1g26690	839210	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO	O.I.	H.G.
C	At1g28490	839749	SYP61 (SYNTAXIN OF PLANTS 61)	Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.	O.I.	H.G.
C	At1g32880	840182	importin alpha-1 subunit, putative	F:protein transporter activity, binding;P:intracellular protein transport;C:cellular_component unknown;MPFO	O.I.	H.G.
C	At1g47830	841199	clathrin coat assembly protein, putative	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP	O.I.	H.G.
C	At1g48550	841276	vacuolar protein sorting-associated protein 26 family protein / VPS26 family protein	F:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOPF	O.I.	H.G.
C	At1g56590	842113	clathrin adaptor complexes medium subunit family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.
C	At1g57620	842138	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFOP	O.I.	H.G.
C	At1g60780	842372	HAP13 (HAPLESS 13)	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.
C	At1g60970	842388	clathrin adaptor complex small chain family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFO	O.I.	H.G.
C	At1g69460	843278	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endoplasmic reticulum, membrane;MFPO	O.I.	H.G.
C	At1g75850	843918	VPS35B (VPS35 HOMOLOG B)	F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPB	O.I.	H.G.
C	At1g76970	844033	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOB	O.I.	H.G.
C	At2g03290	814858	protein transmembrane transporter	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO	O.I.	H.G.
C	At2g14740	815962	ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)	F:calcium ion binding;P:intracellular protein transport, protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex, membrane;MOPBFA	O.I.	H.G.
C	At2g17380	816245	AP19	Encodes clathrin assembly protein AP19.	O.I.	H.G.
C	At2g17790	816289	VPS35A (VPS35 HOMOLOG A)	F:molecular_function unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOP	O.I.	H.G.
C	At2g19790	816498	clathrin adaptor complex small chain family protein	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MOFP	O.I.	H.G.
C	At2g38410	818422	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVA	O.I.	H.G.
C	At3g01340	821216	protein transport protein SEC13 family protein / WD-40 repeat family protein	F:nucleotide binding;P:intracellular protein transport, membrane budding;C:cellular_component unknown;MFBOPA	O.I.	H.G.
C	At3g05720	819741	IMPA-7 (IMPORTIN ALPHA ISOFORM 7)	Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At3g06720	819857	IMPA-1 (IMPORTIN ALPHA ISOFORM 1)	Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At3g07680	819959	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO	O.I.	H.G.
C	At3g08790	820026	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFVOPB	O.I.	H.G.
C	At3g09800	820138	protein binding	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat;MPFO	O.I.	H.G.
C	At3g10780	820247	emp24/gp25L/p24 family protein	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:endomembrane system, integral to membrane, membrane;MFPO	O.I.	H.G.
C	At3g29070	822551	protein transmembrane transporter	F:protein transmembrane transporter activity;P:intracellular protein transport, transport;C:mitochondrion, integral to membrane, membrane;MFPO	O.I.	H.G.
C	At3g48570	824017	protein transport protein SEC61 gamma subunit, putative	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein targeting, protein transport;C:plasma membrane;MFOP	O.I.	H.G.
C	At3g50860	824250	clathrin adaptor complex small chain family protein	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MFOP	O.I.	H.G.
C	At3g51310	824294	VPS35C (VPS35 HOMOLOG C)	Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.	O.I.	H.G.
C	At4g01800	827922	preprotein translocase secA subunit, putative	F:protein binding, ATP binding;P:intracellular protein transport, protein targeting, protein import;C:chloroplast stroma, chloroplast, chloroplast envelope;OBPMA	O.I.	H.G.
C	At4g02150	827472	MOS6 (MODIFIER OF SNC1, 6)	Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At4g08520	826411	clathrin adaptor complex small chain family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, plasma membrane;MPFO	O.I.	H.G.
C	At4g16143	827302	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At4g20110	827757	vacuolar sorting receptor, putative	F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA	O.I.	H.G.
C	At4g20410	827789	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family.	O.I.	H.G.
C	At4g24550	828557	clathrin adaptor complexes medium subunit family protein	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane coat, clathrin vesicle coat, clathrin adaptor complex;MFOP	O.I.	H.G.
C	At4g24920	828594	protein transport protein SEC61 gamma subunit, putative	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPA	O.I.	H.G.
C	At4g27690	828883	VPS26B (VACUOLAR PROTEIN SORTING 26B)	F:molecular_function unknown;P:intracellular protein transport, vacuolar transport, retrograde transport, endosome to Golgi;C:retromer complex;MOFP	O.I.	H.G.
C	At4g32760	829412	protein transporter	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MOFPBVA	O.I.	H.G.
C	At4g35410	829694	clathrin adaptor complex small chain family protein	F:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat, clathrin coat of trans-Golgi network vesicle, clathrin adaptor complex;MFOP	O.I.	H.G.
C	At5g01760	831682	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, intracellular;MFPOBV	O.I.	H.G.
C	At5g16880	831551	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPO	O.I.	H.G.
C	At5g46630	834706	clathrin adaptor complexes medium subunit family protein	clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes	O.I.	H.G.
C	At5g49310	834991	IMPA-5 (IMPORTIN ALPHA ISOFORM 5)	Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At5g50460	835114	protein transport protein SEC61 gamma subunit, putative	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport, protein targeting;C:membrane;MFOPA	O.I.	H.G.
C	At5g52000	835275	IMPA-8 (IMPORTIN ALPHA ISOFORM 8)	Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.	O.I.	H.G.
C	At5g53530	835435	VPS26A (VACUOLAR PROTEIN SORTING 26A)	Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.	O.I.	H.G.
C	At5g63640	836484	VHS domain-containing protein / GAT domain-containing protein	F:protein transporter activity;P:intracellular protein transport, intra-Golgi vesicle-mediated transport;C:Golgi stack, plasma membrane;MFPOB	O.I.	H.G.
L	At1g02620	839269	GTP-binding protein (SAR1A)	F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOF	O.I.	H.G.
L	At1g07410	837253	ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)	F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:endosome, plasma membrane, cell plate;MOFPBAV	O.I.	H.G.
L	At1g08190	837340	vacuolar assembly protein, putative (VPS41)	F:protein binding, binding, nucleotide binding, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport;C:unknown;MOFPVBA	O.I.	H.G.
L	At1g09180	837438	ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	H.G.
L	At1g11905	837739	-	F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;P	O.I.	H.G.
L	At1g18200	838399	AtRABA6b (Arabidopsis Rab GTPase homolog A6b)	F:protein binding, GTP binding, GTPase activity;P:intracellular protein transport, signal transduction, nucleocytoplasmic transport, protein transport, small GTPase mediated signal transduction;C:intracellular;MOFPBAV	O.I.	H.G.
L	At1g22740	838880	RABG3B	GTP-binding protein Rab7	O.I.	H.G.
L	At1g23940	839005	adaptin family protein	F:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;MOFP	O.I.	H.G.
L	At1g26170	839158	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPO	O.I.	H.G.
L	At1g31730	840060	epsilon-adaptin, putative	F:protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat;OMFPBV	O.I.	H.G.
L	At1g48240	841244	ATNPSN12	member of NPSN Gene Family	O.I.	H.G.
L	At1g48760	841298	delta-ADR (delta-adaptin)	F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus;MOFPB	O.I.	H.G.
L	At1g51740	841599	SYP81 (SYNTAXIN OF PLANTS 81)	member of SYP8 Gene Family	O.I.	H.G.
L	At1g52360	841666	coatomer protein complex, subunit beta 2 (beta prime), putative	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPAV	O.I.	H.G.
L	At1g60070	842301	binding / clathrin binding / protein binding / protein transporter	F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex;MFOPB	O.I.	H.G.
L	At1g62020	842497	coatomer protein complex, subunit alpha, putative	F:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, plasma membrane, CUL4 RING ubiquitin ligase complex, membrane;MFOBPA	O.I.	H.G.
L	At1g64220	842727	TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;P	O.I.	H.G.
L	At1g72750	843607	ATTIM23-2	F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport, protein transport;C:mitochondrion, mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex, membrane;MFPO	O.I.	H.G.
L	At1g73430	843677	sec34-like family protein	F:molecular_function unknown;P:intracellular protein transport;C:chloroplast, membrane, cis-Golgi network;MFOPB	O.I.	H.G.
L	At1g79990	844339	protein binding / structural molecule	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MFOBPAV	O.I.	H.G.
L	At2g16200	816117	protein binding / structural molecule	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, Golgi-associated vesicle;PO	O.I.	H.G.
L	At2g20760	816605	protein binding / structural molecule	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane;MBOPF	O.I.	H.G.
L	At2g20790	816608	protein binding	F:protein binding;P:intracellular protein transport, vesicle-mediated transport;C:clathrin adaptor complex;MOFP	O.I.	H.G.
L	At2g21390	816678	coatomer protein complex, subunit alpha, putative	F:protein binding, structural molecule activity, transporter activity;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPI vesicle coat, CUL4 RING ubiquitin ligase complex, membrane;MFOBPA	O.I.	H.G.
L	At2g21630	816701	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	O.I.	H.G.
L	At2g27460	817291	sec23/sec24 transport family protein	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, vesicle-mediated transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPB	O.I.	H.G.
L	At2g36900	818264	MEMB11 (MEMBRIN 11)	member of Membrin Gene Family	O.I.	H.G.
L	At2g40060	818594	protein binding / structural molecule	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast envelope;MOPFBAV	O.I.	H.G.
L	At2g46520	819263	cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative	F:protein transporter activity, importin-alpha export receptor activity, binding;P:intracellular protein transport, cell proliferation, protein import into nucleus, docking;C:nucleus, nuclear pore, membrane, cytoplasm;MFOP	O.I.	H.G.
L	At3g06540	819832	GDP dissociation inhibitor family protein / Rab GTPase activator family protein	F:RAB GDP-dissociation inhibitor activity;P:intracellular protein transport, regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPB	O.I.	H.G.
L	At3g07100	819896	protein transport protein Sec24, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFBOPVA	O.I.	H.G.
L	At3g07190	819906	-	F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBPFAV	O.I.	H.G.
L	At3g08530	820001	clathrin heavy chain, putative	F:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, chloroplast, membrane;MOFPB	O.I.	H.G.
L	At3g08943	3768764	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm	O.I.	H.G.
L	At3g08947	3768765	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm	O.I.	H.G.
L	At3g08960	820048	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOP	O.I.	H.G.
L	At3g11130	820284	clathrin heavy chain, putative	F:protein binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:plasma membrane, vacuole;MOFPB	O.I.	H.G.
L	At3g15980	820842	coatomer protein complex, subunit beta 2 (beta prime), putative	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, COPI vesicle coat;MFOBPA	O.I.	H.G.
L	At3g16270	820873	-	F:unknown;P:intracellular protein transport;C:membrane;MOPBF	O.I.	H.G.
L	At3g17340	820997	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOFVPBA	O.I.	H.G.
L	At3g17440	821008	NPSN13 (NOVEL PLANT SNARE 13)	member of NPSN Gene Family	O.I.	H.G.
L	At3g20450	821590	-	F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;P	O.I.	H.G.
L	At3g23660	821946	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	O.I.	H.G.
L	At3g27325	822352	hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:endoplasmic reticulum, plasma membrane;FMPBO	O.I.	H.G.
L	At3g27530	822375	GC6 (golgin candidate 6)	This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.	O.I.	H.G.
L	At3g49860	824148	ATARLA1B (ADP-ribosylation factor-like A1B)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	H.G.
L	At3g51890	824352	protein binding / structural molecule	F:protein binding, structural molecule activity;P:intracellular protein transport, vesicle-mediated transport;C:clathrin coat of trans-Golgi network vesicle, clathrin coat of coated pit;MPFOB	O.I.	H.G.
L	At3g55480	824714	adaptin family protein	F:protein binding, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system;BMFOP	O.I.	H.G.
L	At3g56190	824785	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)	Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis	O.I.	H.G.
L	At3g56450	824812	ALPHA-SNAP1	member of alpha-SNAP Gene Family	O.I.	H.G.
L	At3g59020	825071	binding / protein transporter	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;OMFBPVA	O.I.	H.G.
L	At3g62560	825430	GTP-binding protein, putative	F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MOFPBA	O.I.	H.G.
L	At4g01810	828105	protein transport protein-related	F:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;PMOFBVA	O.I.	H.G.
L	At4g02080	827368	ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	H.G.
L	At4g09720	826558	Ras-related GTP-binding protein, putative	F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBAV	O.I.	H.G.
L	At4g11380	826741	beta-adaptin, putative	F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFPBA	O.I.	H.G.
L	At4g14160	827055	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	O.I.	H.G.
L	At4g23460	828445	beta-adaptin, putative	F:protein transporter activity, protein binding, clathrin binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MFOPBA	O.I.	H.G.
L	At4g27640	828875	importin beta-2 subunit family protein	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFOPB	O.I.	H.G.
L	At4g30600	829183	signal recognition particle receptor alpha subunit family protein	F:in 6 functions;P:intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting;BOMFAPV	O.I.	H.G.
L	At4g31480	829275	coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative	F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane coat, endomembrane system, COPI vesicle coat;MOFP	O.I.	H.G.
L	At4g31490	829276	coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative	F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:membrane;MOFP	O.I.	H.G.
L	At4g32640	829399	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:intracellular protein transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOBPVA	O.I.	H.G.
L	At4g34450	829596	coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative	F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:chloroplast, membrane;MFOPB	O.I.	H.G.
L	At5g05010	830383	clathrin adaptor complexes medium subunit-related	F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:membrane;MFOPB	O.I.	H.G.
L	At5g06120	830499	Ran-binding protein, putative	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MOP	O.I.	H.G.
L	At5g11490	831021	adaptin family protein	F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOP	O.I.	H.G.
L	At5g17670	831633	hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOP	O.I.	H.G.
L	At5g22770	832340	alpha-ADR (alpha-adaptin)	F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane, membrane;MOFP	O.I.	H.G.
L	At5g22780	832341	adaptin family protein	F:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:plasma membrane;MOFP	O.I.	H.G.
L	At5g27395	5008229	P-P-bond-hydrolysis-driven protein transmembrane transporter	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial inner membrane presequence translocase complex;BMOP	O.I.	H.G.
L	At5g41685	834171	mitochondrial import receptor subunit TOM7 / translocase of outer membrane 7 kDa subunit (TOM7.1)	F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;PF	O.I.	H.G.
L	At5g42570	834264	-	F:molecular_function unknown;P:intracellular protein transport;C:endoplasmic reticulum, plasma membrane;MPOFAB	O.I.	H.G.
L	At5g43670	834387	transport protein, putative	F:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOP	O.I.	H.G.
L	At5g48660	834924	-	F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;MOBFPAV	O.I.	H.G.
L	At5g53480	835429	importin beta-2, putative	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, chloroplast, nuclear pore, cytoplasm;MFOP	O.I.	H.G.
L	At5g55080	835599	AtRAN4 (Ras-related nuclear protein 4)	A member of RAN GTPase gene family.	O.I.	H.G.
L	At5g62600	836381	transportin-SR-related	F:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPOB	O.I.	H.G.

The upper GO terms

Process ID Gene number Process name
GO:0015031 117 The directed movement of proteins into, out of, within or between cells.
GO:0034613 2 Any process by which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
GO:0046907 8 The directed movement of substances within a cell.

Process ID	Gene number	Process name
GO:0015031	117	The directed movement of proteins into, out of, within or between cells.
GO:0034613	2	Any process by which a protein is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
GO:0046907	8	The directed movement of substances within a cell.

The lower GO terms

Process ID Gene number Process name
GO:0000060 3 The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope.
GO:0006605 9 The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:0007038 0 The directed movement of proteins imported into a cell by endocytosis to the vacuole.
GO:0015869 0 The directed movement of protein-DNA complexes into, out of, within or between cells.
GO:0030970 0 The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.
GO:0032527 1 The directed movement of proteins from the endoplasmic reticulum.
GO:0032594 0 The directed movement of a protein from one location to another within a lipid bilayer.
GO:0032779 0 The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell, induced by an increase in copper ion concentration.
GO:0033369 0 The directed movement of a protein to a location within a secretory granule in a mast cell.
GO:0033376 0 The directed movement of a protein to a location within a secretory granule in a T cell.
GO:0043001 0 The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.
GO:0048227 1 Transport of a vesicle from the plasma membrane to the endosome.
GO:0051708 0 The directed movement of an organism's proteins within a cell of a second organism, where the two organisms are in a symbiotic interaction.
GO:0065002 0 The directed movement of proteins in a cell, from one side of a membrane to another.
GO:0070843 0 The directed movement of misfolded proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.
GO:0070844 0 The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.

Process ID	Gene number	Process name
GO:0000060	3	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope.
GO:0006605	9	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:0007038	0	The directed movement of proteins imported into a cell by endocytosis to the vacuole.
GO:0015869	0	The directed movement of protein-DNA complexes into, out of, within or between cells.
GO:0030970	0	The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon.
GO:0032527	1	The directed movement of proteins from the endoplasmic reticulum.
GO:0032594	0	The directed movement of a protein from one location to another within a lipid bilayer.
GO:0032779	0	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell, induced by an increase in copper ion concentration.
GO:0033369	0	The directed movement of a protein to a location within a secretory granule in a mast cell.
GO:0033376	0	The directed movement of a protein to a location within a secretory granule in a T cell.
GO:0043001	0	The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane.
GO:0048227	1	Transport of a vesicle from the plasma membrane to the endosome.
GO:0051708	0	The directed movement of an organism's proteins within a cell of a second organism, where the two organisms are in a symbiotic interaction.
GO:0065002	0	The directed movement of proteins in a cell, from one side of a membrane to another.
GO:0070843	0	The directed movement of misfolded proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.
GO:0070844	0	The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.

Comparison with co-expressed genes

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Query process ID	GO:0006886
Process name	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Organism	Arabidopsis thaliana

Biological process to genes

Query process ID GO:0006886 Process name The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. Organism Arabidopsis thaliana

The upper GO terms

The lower GO terms

Comparison with co-expressed genes

Query process ID GO:0006886

Process name The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

Organism Arabidopsis thaliana