Biological process to genes

Query process ID GO:0006725
Process name The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. H.G. Other DB
COs01g0168800C99695-Alpha/beta hydrolase family protein2e-1At1g08770PRA1.E (PRENYLATED RAB ACCEPTOR 1.E)O.I.H.G.
COs04g0448900AB050884.1-Zeaxanthin epoxidase9e-11At5g67030ABA1 (ABA DEFICIENT 1)O.I.H.G.
COs10g0375700AK068318.1-Hypothetical protein3e-1At1g78210hydrolase, alpha/beta fold family proteinO.I.H.G.
COs10g0498200AK120570.1-Epoxide hydrolase family protein4e-2At1g70870major latex protein-related / MLP-relatedO.I.H.G.
LOs01g0199400AK070748.1-Alpha/beta hydrolase family protein1e-9At5g11650hydrolase, alpha/beta fold family proteinO.I.H.G.
LOs01g0919700---0--O.I.H.G.
LOs02g0471300AK110913.1-Aromatic-ring hydroxylase family protein8e-4At4g15760MO1 (MONOOXYGENASE 1)O.I.H.G.
LOs02g05595009630.m03370--6e-1At4g15760MO1 (MONOOXYGENASE 1)O.I.H.G.
LOs02g0560300---0--O.I.H.G.
LOs02g0581500AK059396.1-Alpha/beta hydrolase family protein3e+0At4g21890unknown proteinO.I.H.G.
LOs02g0705100AK063491.1-Epoxide hydrolase family protein2e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.
LOs02g0744900AK098873.1-Geranylgeranyl hydrogenase6e-5At1g74470geranylgeranyl reductaseO.I.H.G.
LOs03g0178400AK108257.1-Alpha/beta hydrolase family protein9e-3At5g21950hydrolase, alpha/beta fold family proteinO.I.H.G.
LOs03g0231700AK068401.1-Squalene monooxygenase 2 (EC 1.14.99.7)1e-19At1g58440XF1O.I.H.G.
LOs03g03888009631.m02672-Alpha/beta hydrolase family protein3e-2At5g21950hydrolase, alpha/beta fold family proteinO.I.H.G.
LOs03g0829100AK072669.1-Soluble epoxide hydrolase6e-4At2g26740ATSEH (Arabidopsis thaliana soluble epoxide hydrolase)O.I.H.G.
LOs03g0829200AK108175.1-Soluble epoxide hydrolase3e+0At4g15955epoxide hydrolase-relatedO.I.H.G.
LOs03g0839100---0--O.I.H.G.
LOs04g0449500AK100347.1-Conserved hypothetical protein3e-1At4g24310unknown proteinO.I.H.G.
LOs04g0644600AK099966.1-Epoxide hydrolase family protein4e-21At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.
LOs06g01325009634.m00329-Alpha/beta hydrolase family protein1e-2At1g64670BDG1 (BODYGUARD1)O.I.H.G.
LOs06g0367100AK066930.1-Glycoside hydrolase, family 13, N-terminal domaincontaining protein2e-6At3g20440alpha-amylase/ catalytic/ cation bindingO.I.H.G.
LOs06g0597600AK120804.1-Aromatic-ring hydroxylase family protein8e-4At5g19090heavy-metal-associated domain-containing proteinO.I.H.G.
LOs07g04919009635.m03031-Flavoprotein monooxygenase domain containingprotein5e-5At2g35660CTF2AO.I.H.G.
LOs07g0565700AK112115.1-Alpha/beta hydrolase family protein4e-8At1g11090hydrolase, alpha/beta fold family proteinO.I.H.G.
LOs09g0394700AF039531.1-Lysophospholipase-like protein6e-7At5g11650hydrolase, alpha/beta fold family proteinO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00442375The chemical reactions and pathways by which individual cells transform chemical substances.



The lower GO terms

Process ID Gene number Process name
GO:00067603The chemical reactions and pathways involving folic acid and its derivatives.
GO:00090723The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO:00091120The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine.
GO:00092380The chemical reactions and pathways involving enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.
GO:00096900The chemical reactions and pathways involving cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
GO:00096960The chemical reactions and pathways involving of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.
GO:00096980The chemical reactions and pathways involving aromatic derivatives of trans-cinnamic acid.
GO:00189240The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
GO:00189580The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. The largest single use of phenol is in the production of plastics, but it is also used in the synthesis of caprolactam, a precursor for nylon 6 and other man-made fibers.
GO:00189650The chemical reactions and pathways involving any s-triazine compound. These compounds include many pesticides of widespread use in agriculture, and are characterized by a symmetrical hexameric ring consisting of alternating carbon and nitrogen atoms.
GO:00189820The chemical reactions and pathways involving vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods and can be obtained as a by-product of the pulp and paper industry by the oxidative breakdown of lignin.
GO:00194340The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.
GO:00194380The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring.
GO:00194390The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.
GO:00195070The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.
GO:00311470The chemical reactions and pathways involving 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one, also known as DIF-1, differentiation-inducing factor-1. DIF-1 is a secreted chlorinated molecule that controls cell fate during development of Dictyostelium cells.
GO:00330760The chemical reactions and pathways involving isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.
GO:00423990The chemical reactions and pathways involving ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.
GO:00424300The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan) formed in degradation of tryptophan, and compounds derived from it.
GO:00425370The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation, or any of its derivatives.
GO:00425580The chemical reactions and pathways involving any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.
GO:00427230The chemical reactions and pathways involving thiamin (vitamin B1), and compounds derived from it.
GO:00454600The chemical reactions and pathways involving sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.
GO:00461520The chemical reactions and pathways involving ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.
GO:00464990The chemical reactions and pathways involving S-adenosylmethioninamine, (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt.
GO:00465000The chemical reactions and pathways involving S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.
GO:00465010The chemical reactions and pathways involving protoporphyrinogen IX, the specific substrate for the enzyme ferrochelatase, which catalyzes the insertion of iron to form protoheme. It is probably also the substrate for chlorophyll formation.
GO:00465020The chemical reactions and pathways involving uroporphyrinogen III, a precursor for synthesis of vitamin B12, chlorophyll, and heme in organisms that produce these compounds.





Comparison with co-expressed genes



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