CoP: Co-expressed Biological Processes

Biological process to genes

Query process ID GO:0006629

Process name The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. H.G. Other DB
C Os01g0651800 AK102737.1 - Lipase, class 3 family protein 3e+0 At2g39725 complex 1 family protein / LVR family protein O.I. H.G.
C Os01g0787600 AK121948.1 - Ethylene-induced esterase 2e+0 At5g05830 zinc finger (C3HC4-type RING finger) family protein O.I. H.G.
C Os02g0653900 AK104793.1 - - 6e-2 At4g16820 lipase class 3 family protein O.I. H.G.
C Os03g0340900 AB042935.1 - RSH1 6e-31 At4g02260 RSH1 (RELA-SPOT HOMOLOG 1) O.I. H.G.
C Os09g0492700 AK101104.1 - 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1(EC 1.1.1.34) (HMG- CoA reductase 1) (HMGR1) 3e-14 At1g76490 HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1) O.I. H.G.
C Os10g0562200 9638.m03760 - Lipase-like protein 8e-1 At1g06800 lipase class 3 family protein O.I. H.G.
L Os01g0166700 AK067805.1 - Saposin family protein 3e+0 At3g63160 unknown protein O.I. H.G.
L Os01g0618600 - - - 0 - - O.I. H.G.
L Os01g0631900 - - - 0 - - O.I. H.G.
L Os01g0900400 9629.m06700 - Lipase, class 3 family protein 6e-1 At3g27270 - O.I. H.G.
L Os01g0946300 9629.m07101 - Lecithin:cholesterol acyltransferase familyprotein 5e-1 At3g45980 HTB9 O.I. H.G.
L Os01g0968500 - - - 0 - - O.I. H.G.
L Os02g0286200 AK058880.1 - Lipase, class 3 family protein 7e-1 At5g24190 - O.I. H.G.
L Os02g0481700 AK120085.1 - Conserved hypothetical protein 4e-10 At3g07400 lipase class 3 family protein O.I. H.G.
L Os02g0589000 AK066288.1 - Lecithin:cholesterol acyltransferase familyprotein 8e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) O.I. H.G.
L Os02g0590400 AK099196.1 - Lecithin:cholesterol acyltransferase familyprotein 9e-1 At5g63480 unknown protein O.I. H.G.
L Os02g0633000 - - - 0 - - O.I. H.G.
L Os02g0767200 AK064404.1 - Lipase, class 3 family protein 1e-2 At3g14360 lipase class 3 family protein O.I. H.G.
L Os02g0780700 AK063558.1 - Lipase, class 3 family protein 4e-10 At3g14075 lipase class 3 family protein O.I. H.G.
L Os03g0181700 - - - 0 - - O.I. H.G.
L Os03g0232800 AK121004.1 - Lecithin:cholesterol acyltransferase familyprotein 3e+0 At4g34590 GBF6 (G-BOX BINDING FACTOR 6) O.I. H.G.
L Os03g0730000 AK071679.1 - Lecithin:cholesterol acyltransferase familyprotein 1e+0 At3g21865 PEX22 (peroxin 22) O.I. H.G.
L Os03g0830900 AK066720.1 - Lipase, class 3 family protein 1e-12 At4g16070 lipase class 3 family protein O.I. H.G.
L Os04g0489200 - - - 0 - - O.I. H.G.
L Os04g0657500 AK066638.1 - Lipase, class 3 family protein 1e+0 At3g17100 transcription factor O.I. H.G.
L Os05g0127200 AK064924.1 - Phosphoinositide-specific phospholipase C (PLC)family protein 8e-2 At3g47220 phosphoinositide-specific phospholipase C family protein O.I. H.G.
L Os05g0335100 9633.m02445 - Conserved hypothetical protein 3e+0 At4g14010 RALFL32 (ralf-like 32) O.I. H.G.
L Os05g0372400 - - - 0 - - O.I. H.G.
L Os05g0390000 9633.m02964 - Lipase, class 3 family protein 8e-7 At1g51440 lipase class 3 family protein O.I. H.G.
L Os05g0574100 AK106699.1 - Lipase, class 3 family protein 3e+0 At5g33390 glycine-rich protein O.I. H.G.
L Os06g0210900 AK110332.1 - Lipase, class 3 family protein 6e-2 At2g30550 lipase class 3 family protein O.I. H.G.
L Os07g0661100 CB096298 - Glycosyl transferase, family 4 protein 3e-3 At2g41490 GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-P+TRANSFERASE) O.I. H.G.
L Os07g0668700 AK072772.1 - Lipase, class 3 family protein 3e-4 At5g18630 lipase class 3 family protein O.I. H.G.
L Os07g0694000 AF332874.1 - Phosphoinositide-specific phospholipase C 8e-8 At2g40116 phosphoinositide-specific phospholipase C family protein O.I. H.G.
L Os08g0143600 9636.m00406 - Lipase, class 3 family protein 1e-2 At1g06800 lipase class 3 family protein O.I. H.G.
L Os08g0529800 - - - 0 - - O.I. H.G.
L Os09g0392100 AK100117.1 - Lipase, class 3 family protein 1e+0 At4g19038 LCR15 (Low-molecular-weight cysteine-rich 15) O.I. H.G.
L Os09g0444200 AK099811.1 - Lecithin:cholesterol acyltransferase familyprotein 9e-30 At5g13640 ATPDAT O.I. H.G.
L Os12g0562400 AJ276277.2 - Phospholipase C (Fragment) 1e-11 At2g40116 phosphoinositide-specific phospholipase C family protein O.I. H.G.

ECC	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.
C	Os01g0651800	AK102737.1	-	Lipase, class 3 family protein	3e+0	At2g39725	complex 1 family protein / LVR family protein	O.I.	H.G.
C	Os01g0787600	AK121948.1	-	Ethylene-induced esterase	2e+0	At5g05830	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.
C	Os02g0653900	AK104793.1	-	-	6e-2	At4g16820	lipase class 3 family protein	O.I.	H.G.
C	Os03g0340900	AB042935.1	-	RSH1	6e-31	At4g02260	RSH1 (RELA-SPOT HOMOLOG 1)	O.I.	H.G.
C	Os09g0492700	AK101104.1	-	3-hydroxy-3-methylglutaryl-coenzyme A reductase 1(EC 1.1.1.34) (HMG- CoA reductase 1) (HMGR1)	3e-14	At1g76490	HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1)	O.I.	H.G.
C	Os10g0562200	9638.m03760	-	Lipase-like protein	8e-1	At1g06800	lipase class 3 family protein	O.I.	H.G.
L	Os01g0166700	AK067805.1	-	Saposin family protein	3e+0	At3g63160	unknown protein	O.I.	H.G.
L	Os01g0618600	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0631900	-	-	-	0	-	-	O.I.	H.G.
L	Os01g0900400	9629.m06700	-	Lipase, class 3 family protein	6e-1	At3g27270	-	O.I.	H.G.
L	Os01g0946300	9629.m07101	-	Lecithin:cholesterol acyltransferase familyprotein	5e-1	At3g45980	HTB9	O.I.	H.G.
L	Os01g0968500	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0286200	AK058880.1	-	Lipase, class 3 family protein	7e-1	At5g24190	-	O.I.	H.G.
L	Os02g0481700	AK120085.1	-	Conserved hypothetical protein	4e-10	At3g07400	lipase class 3 family protein	O.I.	H.G.
L	Os02g0589000	AK066288.1	-	Lecithin:cholesterol acyltransferase familyprotein	8e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	H.G.
L	Os02g0590400	AK099196.1	-	Lecithin:cholesterol acyltransferase familyprotein	9e-1	At5g63480	unknown protein	O.I.	H.G.
L	Os02g0633000	-	-	-	0	-	-	O.I.	H.G.
L	Os02g0767200	AK064404.1	-	Lipase, class 3 family protein	1e-2	At3g14360	lipase class 3 family protein	O.I.	H.G.
L	Os02g0780700	AK063558.1	-	Lipase, class 3 family protein	4e-10	At3g14075	lipase class 3 family protein	O.I.	H.G.
L	Os03g0181700	-	-	-	0	-	-	O.I.	H.G.
L	Os03g0232800	AK121004.1	-	Lecithin:cholesterol acyltransferase familyprotein	3e+0	At4g34590	GBF6 (G-BOX BINDING FACTOR 6)	O.I.	H.G.
L	Os03g0730000	AK071679.1	-	Lecithin:cholesterol acyltransferase familyprotein	1e+0	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.
L	Os03g0830900	AK066720.1	-	Lipase, class 3 family protein	1e-12	At4g16070	lipase class 3 family protein	O.I.	H.G.
L	Os04g0489200	-	-	-	0	-	-	O.I.	H.G.
L	Os04g0657500	AK066638.1	-	Lipase, class 3 family protein	1e+0	At3g17100	transcription factor	O.I.	H.G.
L	Os05g0127200	AK064924.1	-	Phosphoinositide-specific phospholipase C (PLC)family protein	8e-2	At3g47220	phosphoinositide-specific phospholipase C family protein	O.I.	H.G.
L	Os05g0335100	9633.m02445	-	Conserved hypothetical protein	3e+0	At4g14010	RALFL32 (ralf-like 32)	O.I.	H.G.
L	Os05g0372400	-	-	-	0	-	-	O.I.	H.G.
L	Os05g0390000	9633.m02964	-	Lipase, class 3 family protein	8e-7	At1g51440	lipase class 3 family protein	O.I.	H.G.
L	Os05g0574100	AK106699.1	-	Lipase, class 3 family protein	3e+0	At5g33390	glycine-rich protein	O.I.	H.G.
L	Os06g0210900	AK110332.1	-	Lipase, class 3 family protein	6e-2	At2g30550	lipase class 3 family protein	O.I.	H.G.
L	Os07g0661100	CB096298	-	Glycosyl transferase, family 4 protein	3e-3	At2g41490	GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-P+TRANSFERASE)	O.I.	H.G.
L	Os07g0668700	AK072772.1	-	Lipase, class 3 family protein	3e-4	At5g18630	lipase class 3 family protein	O.I.	H.G.
L	Os07g0694000	AF332874.1	-	Phosphoinositide-specific phospholipase C	8e-8	At2g40116	phosphoinositide-specific phospholipase C family protein	O.I.	H.G.
L	Os08g0143600	9636.m00406	-	Lipase, class 3 family protein	1e-2	At1g06800	lipase class 3 family protein	O.I.	H.G.
L	Os08g0529800	-	-	-	0	-	-	O.I.	H.G.
L	Os09g0392100	AK100117.1	-	Lipase, class 3 family protein	1e+0	At4g19038	LCR15 (Low-molecular-weight cysteine-rich 15)	O.I.	H.G.
L	Os09g0444200	AK099811.1	-	Lecithin:cholesterol acyltransferase familyprotein	9e-30	At5g13640	ATPDAT	O.I.	H.G.
L	Os12g0562400	AJ276277.2	-	Phospholipase C (Fragment)	1e-11	At2g40116	phosphoinositide-specific phospholipase C family protein	O.I.	H.G.

The upper GO terms

Process ID Gene number Process name
GO:0044238 0 The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

Process ID	Gene number	Process name
GO:0044238	0	The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

The lower GO terms

Process ID Gene number Process name
GO:0008610 4 The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0016042 9 The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0044255 0 The chemical reactions and pathways involving lipids, as carried out by individual cells.

Process ID	Gene number	Process name
GO:0008610	4	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0016042	9	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0044255	0	The chemical reactions and pathways involving lipids, as carried out by individual cells.

Comparison with co-expressed genes

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Query process ID	GO:0006629
Process name	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Organism	Oryza sativa

Biological process to genes

The upper GO terms

Process ID Gene number Process name GO:00442380The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

The lower GO terms

Comparison with co-expressed genes

Process ID Gene number Process name
GO:0044238 0 The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.