CoP: Co-expressed Biological Processes

Biological process to genes

Query process ID GO:0006516

Process name The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.

Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. H.G. Other DB
L Os03g0597600 AK069458.1 - L-asparaginase (EC 3.5.1.1) (L-asparagineamidohydrolase) 4e-2 At5g08100 L-asparaginase / L-asparagine amidohydrolase O.I. H.G.
L Os04g0549300 AK063296.1 - Glycosylasparaginase-like protein 1e-17 At5g61540 L-asparaginase, putative / L-asparagine amidohydrolase, putative O.I. H.G.
L Os04g0650700 AK058733.1 - L-asparaginase (L-asparagine amidohydrolase) 1e-1 At3g16150 L-asparaginase, putative / L-asparagine amidohydrolase, putative O.I. H.G.
L Os04g0682400 AK072470.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-3 At3g26420 ATRZ-1A O.I. H.G.

The upper GO terms

Process ID Gene number Process name
GO:0009100 0 The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
GO:0043285 0 The chemical reactions and pathways resulting in the breakdown of biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins.

The lower GO terms

Process ID Gene number Process name
GO:0006058 0 The chemical reactions and pathways resulting in the breakdown of mannoproteins, any protein that contains covalently bound mannose residues other than as a moiety of nucleic acid.
GO:0006517 0 The removal of sugar residues from a glycosylated protein.
GO:0009050 0 The chemical reactions and pathways resulting in the breakdown of glycopeptides, any compound in which carbohydrate is covalently attached to an oligopeptide composed of residues of L and/or D-amino acids. The term usually denotes a product of proteolytic degradation of a glycoprotein but includes glycated peptide.
GO:0042987 0 The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease.
GO:0045173 0 The chemical reactions and pathways resulting in the breakdown of O-sialoglycoproteins, glycoproteins which contain sialic acid as one of their carbohydrates. They are often found on or in the cell or tissue membranes and participate in a variety of biological activities.
GO:0060309 0 The chemical reactions and pathways resulting in the breakdown of elastin. Elastin is a glycoprotein which is randomly coiled and crosslinked to form elastic fibers that are found in connective tissue.

Comparison with co-expressed genes

Back to the CoP portal site

Back to the KAGIANA project homepage