Biological process to genes

Query process ID	GO:0006418
Process name	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
Organism	Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	Other DB
C	Os01g0372700	AK101893.1	-	Asparaginyl-tRNA synthetase, cytoplasmic 1 (EC6.1.1.22) (Asparagine-- tRNA ligase 1) (AsnRS 1)	1e-15	At1g70980	SYNC3	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
C	Os09g0294000	D78573.1	-	Bifunctional aspartokinase/homoserinedehydrogenase 2, chloroplast precursor (AK-HD 2) (AK-HSDH2) [Includes: Aspartokinase (EC 2.7.2.4)	9e-27	At4g19710	bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
C	Os10g0554200	AK105765.1	-	Nitrate transporter	2e-2	At4g17500	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os01g0120300	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os01g0153400	AK059454.1	-	Aspartyl-tRNA synthetase (EC 6.1.1.12)(Aspartate--tRNA ligase) (AspRS)	4e-19	At4g33760	tRNA synthetase class II (D, K and N) family protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os01g0185200	AK062984.1	-	Glutamyl-tRNA synthetase, class Ic family protein	9e-42	At1g25350	OVA9 (ovule abortion 9)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os01g0743400	AK069114.1	-	Tryptophanyl-tRNA synthetase (Fragment)	1e-14	At2g25840	OVA4 (ovule abortion 4)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0121000	AK099931.1	-	Glutamyl-tRNA synthetase (EC 6.1.1.17)(Glutamate--tRNA ligase) (GluRS)	8e-60	At5g64050	ERS (GLUTAMATE TRNA SYNTHETASE)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0139600	AK107052.1	-	Dars-prov protein	2e-3	At4g26870	aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0143500	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0538000	AK058738.1	-	Threonyl-tRNA synthetase, class IIa family protein	9e-20	At2g04842	EMB2761 (EMBRYO DEFECTIVE 2761)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0623500	AK066521.1	-	Lysyl-tRNA synthetase, class-2 family protein	4e-28	At3g13490	OVA5 (OVULE ABORTION 5)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0686400	AK119608.1	-	Aspartyl-tRNA synthetase (EC 6.1.1.12)(Aspartate--tRNA ligase) (AspRS)	1e-6	At4g31180	aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0754700	AK066904.1	-	-	2e-17	At3g46100	ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0778200	AK065948.1	-	Isoleucyl-tRNA synthetase, class Ia family protein	9e-18	At5g49030	OVA2 (ovule abortion 2)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os02g0790500	AK066691.1	-	Glycosyl transferase, family 20 domain containingprotein	3e-11	At1g68020	ATTPS6	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os03g0209600	AK068726.1	-	MEtRS (EC 6.1.1.10)	3e-10	At3g55400	OVA1 (OVULE ABORTION 1)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os03g0373100	AK107517.1	-	Conserved hypothetical protein	8e-1	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os03g0586800	AK063765.1	-	Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNAligase) (LysRS)	2e-26	At3g11710	ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os03g0605900	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os03g0694900	AK121157.1	-	Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNAligase) (ValRS)	2e-28	At1g14610	TWN2 (TWIN 2)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os05g0150900	AK099789.1	-	-	3e-32	At3g02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os05g0163000	AK066161.1	-	Arginyl-tRNA synthetase, class Ic family protein	2e-20	At4g26300	emb1027 (embryo defective 1027)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os05g0320000	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os05g0331200	AK100884.1	-	External rotenone-insensitive NADPH dehydrogenase	7e-8	At4g05020	NDB2 (NAD(P)H dehydrogenase B2)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os06g0321700	AK109831.1	-	Hypothetical protein	4e-2	At3g58710	WRKY69	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0163500	AK059224.1	-	Aminoacyl-tRNA synthetase, class 1a,anticodon-binding domain containing protein	3e-15	At5g16715	EMB2247 (embryo defective 2247)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0165000	AK106594.1	-	-	1e-58	At5g52520	OVA6 (OVULE ABORTION 6)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0247000	AK072232.1	-	Plant invertase/pectin methylesterase inhibitordomain containing protein	8e-1	At4g31830	unknown protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0278301	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0616000	AK120310.1	-	Conserved hypothetical protein	2e-7	At3g14172	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os07g0675400	AK065735.1	-	Aminoacyl-tRNA synthetase, class Ib domaincontaining protein	9e-1	At2g24480	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0150800	AK101530.1	-	Tyrosyl-tRNA synthetase, class Ib family protein	1e-20	At2g33840	tRNA synthetase class I (W and Y) family protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0191800	9636.m00880	-	Aminoacyl-tRNA synthetase, class Ib domaincontaining protein	2e-6	At1g28350	ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tyrosine-tRNA ligase	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0295300	AK070378.1	-	Threonyl-tRNA synthetase, mitochondrial precursor(EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS)	6e-12	At5g26830	threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0342400	AK066783.1	-	Bifunctional aspartokinase/homoserinedehydrogenase 1, chloroplast precursor (AK-HD 1) (AK-HSDH1) [Includes: Aspartokinase (EC 2.7.2.4)	7e-24	At4g19710	bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putative	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0404800	9636.m03123	-	-	3e+0	At4g24026	unknown protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0523400	-	-	-	0	-	-	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os08g0538000	AK119836.1	-	Glycyl-tRNA synthetase, alpha2 dimer familyprotein	7e-27	At1g29880	glycyl-tRNA synthetase / glycine--tRNA ligase	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os09g0378300	AK068860.1	-	Leucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.4)(Leucine--tRNA ligase) (LeuRS)	6e-19	At1g09620	ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os09g0447500	AK110565.1	-	Cytochrome P450 family protein	6e-2	At1g13110	CYP71B7	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os10g0198600	AK068249.1	-	Intron-encoded nuclease 2 domain containingprotein	2e-2	At1g53800	endonuclease	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
L	Os10g0429000	9638.m02503	-	-	3e-2	At3g08600	unknown protein	O.I.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

The upper GO terms

Process ID	Gene number	Process name
GO:0006412	0	The cellular metabolic process by which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0043039	0	The chemical reactions and pathways by which the various amino acids become bonded to their corresponding tRNAs. The most common route for synthesis of aminoacyl tRNA is by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules.

The lower GO terms

Process ID	Gene number	Process name
GO:0006419	2	The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006420	2	The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006421	1	The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006422	5	The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006423	0	The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006424	4	The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA.
GO:0006425	0	The process of coupling glutamine to glutaminyl-tRNA, catalyzed by glutaminyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA.
GO:0006426	2	The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006427	2	The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006428	1	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006429	1	The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006430	2	The process of coupling lysine to lysyl-tRNA, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006431	3	The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006432	1	The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006433	0	The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006434	0	The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006435	2	The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006436	1	The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006437	1	The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0006438	2	The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
GO:0070127	0	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis in a mitochondrion.

Comparison with co-expressed genes

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