Biological process to genes

Query process ID GO:0043157
Process name A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g15020838067thioredoxin family proteinEncodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.O.I.H.G.
XAt3g14070820622CAX9 (CATION EXCHANGER 9)Involved in cation (K, Na and Mn) homeostasis and transportO.I.H.G.
XAt5g63980836519SAL1Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.O.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00096510A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.



The lower GO terms

Process ID Gene number Process name
GO:00431560Structural changes to eukaryotic chromatin occurring as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.



Genes co-expressed with At1g15020

At1g15020NF: 0.35%ile: 47.6SF: 0.17SP: 0.11SR: 0.33

Gene IDRepr. IDGene NameFunctional Description
At1g15020838067thioredoxin family proteinEncodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.
At5g66030836733ATGRIPInvolved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.
At3g62240825397zinc finger (C2H2 type) family proteinF:protein binding, zinc ion binding;P:unknown;C:intracellular;OMFBPV
At2g35330818100protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPAV
At3g27530822375GC6 (golgin candidate 6)This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.
At5g43130834330TAF4 (TBP-ASSOCIATED FACTOR 4)F:transcription initiation factor activity;P:transcription initiation;C:transcription factor TFIID complex;OMFBPVA
At3g47610823915transcription regulator/ zinc ion bindingF:transcription regulator activity, zinc ion binding;P:regulation of transcription;C:nucleus;MFOP
At1g61690842466phosphoinositide bindingF:phosphoinositide binding;P:signal transduction;C:unknown;MOFBPAV
At2g17030816206F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P



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