Biological process to genes

Query process ID GO:0016051
Process name The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt3g55800824746SBPASE (sedoheptulose-bisphosphatase)Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.O.I.H.G.
CAt1g02720839475GATL5 (GALACTURONOSYLTRANSFERASE 5)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt1g03520839471glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVOO.I.H.G.
CAt1g06780837189GAUT6 (Galacturonosyltransferase 6)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt1g09350837457AtGolS3 (Arabidopsis thaliana galactinol synthase 3)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt1g13250837885GATL3 (Galacturonosyltransferase-like 3)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt1g19300838512PARVUS (PARVUS)The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.O.I.H.G.
CAt1g24170839030LGT9Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt1g53100841744acetylglucosaminyltransferaseF:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVOO.I.H.G.
CAt1g56600842114AtGolS2 (Arabidopsis thaliana galactinol synthase 2)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt1g60450842340AtGolS7 (Arabidopsis thaliana galactinol synthase 7)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt1g60470842342AtGolS4 (Arabidopsis thaliana galactinol synthase 4)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt1g70090843345LGT8 (GLUCOSYL TRANSFERASE FAMILY 8)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt1g71070843447glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:endomembrane system, membrane;MPBVOO.I.H.G.
CAt1g71220843462EBS1 (EMS-mutagenized bri1 suppressor 1)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity;P:carbohydrate biosynthetic process, protein amino acid glycosylation;C:endoplasmic reticulum;MFOBPO.I.H.G.
CAt2g20810816611GAUT10 (GALACTURONOSYLTRANSFERASE 10)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt2g30575817607LGT5 (LOS GLYCOSYLTRANSFERASE 5)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt2g35710818140glycogenin glucosyltransferase (glycogenin)-relatedF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBVO.I.H.G.
CAt2g37585818335glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPOBO.I.H.G.
CAt2g38650818447GAUT7 (GALACTURONOSYLTRANSFERASE 7)F:polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:Golgi apparatus;PBMFOVO.I.H.G.
CAt2g46480819257GAUT2Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt2g47180819331AtGolS1 (Arabidopsis thaliana galactinol synthase 1)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt3g01040821312GAUT13 (Galacturonosyltransferase 13)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g02350820474GAUT9 (Galacturonosyltransferase 9)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g03690821186UNE7 (unfertilized embryo sac 7)F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, double fertilization forming a zygote and endosperm, pollen tube development;C:endomembrane system, membrane;MPBVOO.I.H.G.
CAt3g06260819800GATL4 (Galacturonosyltransferase-like 4)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g15350820766glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:endomembrane system, integral to membrane, membrane;MPBVOO.I.H.G.
CAt3g25140822105QUA1 (QUASIMODO 1)Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.O.I.H.G.
CAt3g28340822462GATL10 (Galacturonosyltransferase-like 10)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g50760824240GATL2 (Galacturonosyltransferase-like 2)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g58790825048GAUT15 (Galacturonosyltransferase 15)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g61130825285GAUT1 (GALACTURONOSYLTRANSFERASE 1)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt3g62660825440GATL7 (Galacturonosyltransferase-like 7)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt4g02130827438GATL6Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt4g03340827969glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:mitochondrion, membrane;MPBVOO.I.H.G.
CAt4g16600827361transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBVO.I.H.G.
CAt4g26250828731AtGolS6 (Arabidopsis thaliana galactinol synthase 6)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFBVOO.I.H.G.
CAt4g27480828857glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process, N-terminal protein myristoylation;C:endomembrane system, membrane;MPBVOO.I.H.G.
CAt4g38270829984GAUT3 (Galacturonosyltransferase 3)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt5g15050831357glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVOO.I.H.G.
CAt5g15470831400GAUT14 (Galacturonosyltransferase 14)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt5g18480831966PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:membrane;PMFVOBO.I.H.G.
CAt5g23790832444AtGolS5 (Arabidopsis thaliana galactinol synthase 5)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFBVOO.I.H.G.
CAt5g30500833137galactinol synthase, putativeF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOO.I.H.G.
CAt5g39990833996glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVOO.I.H.G.
CAt5g47780834829GAUT4 (Galacturonosyltransferase 4)Encodes a protein with putative galacturonosyltransferase activity.O.I.H.G.
CAt5g54690835558GAUT12 (GALACTURONOSYLTRANSFERASE 12)Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%).O.I.H.G.
LAt3g24090821995glutamine-fructose-6-phosphate transaminase (isomerizing)/ sugar binding / transaminaseF:sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity;P:carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process;C:cytoplasm;OBMAFPVO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00059750The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0009058116The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.



The lower GO terms

Process ID Gene number Process name
GO:000027119The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages.
GO:00093121The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.
GO:00195780The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.
GO:00196851A complex cycle of enzyme-mediated reactions which catalyzes the reduction of carbon dioxide to sugar. As well as carbon dioxide the cycle requires reducing power in the form of reduced nicotinamide adenine dinucleotide phosphate (NADP) and chemical energy in the form of adenosine triphosphate (ATP). The reduced NADP (NADPH) and ATP are produced by the 'light' reactions.
GO:00346370The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, carried out by individual cells.
GO:00463640The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.
GO:00463990The chemical reactions and pathways resulting in the formation of glucuronate, the anion of glucuronic acid.





Comparison with co-expressed genes



Back to the CoP portal site

Back to the KAGIANA project homepage