Biological process to genes

Query process ID GO:0009987
Process name Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
LAt1g09300837451metallopeptidase M24 family proteinF:metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity;P:proteolysis, cellular process;C:mitochondrion;BOMFAPO.I.H.G.
LAt3g05350819699aminopeptidase/ hydrolaseF:hydrolase activity, aminopeptidase activity;P:proteolysis, cellular process;C:chloroplast, chloroplast stroma;BOMFAPO.I.H.G.
LAt3g51800824343ATG2putative nuclear DNA-binding protein G2p (AtG2) mRNA,O.I.H.G.
LAt4g10710826665SPT16 (global transcription factor C)encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.O.I.H.G.
LAt4g29490829070aminopeptidase/ manganese ion bindingF:manganese ion binding, aminopeptidase activity;P:cellular process;C:chloroplast;BOMFAPO.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00081500Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.



The lower GO terms

Process ID Gene number Process name
GO:00017750A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand.
GO:00030010The cellular process by which a physical entity or change in state, a signal, is created that originates in one cell and is used to transfer information to another cell. This process begins with the initial formation of the signal and ends with the mature form and placement of the signal.
GO:00062760The maintenance of the integrity of extrachromosomal plasmid DNA; includes processes that ensure plasmids are retained in the daughter cells after cell division.
GO:00063230Any process by which DNA and associated proteins are formed into a compact, orderly structure.
GO:000641371The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.
GO:00069030The process by which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo.
GO:00069280Any process involved in the controlled movement of a cell.
GO:000694914The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division.
GO:00069960A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:000701719Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
GO:00070280A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:000704916The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
GO:000705911The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.
GO:00071544Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
GO:000715510The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO:00071632Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.
GO:00072720The process whereby glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.
GO:00073020Attachment of the nurse cell nucleus to the plasma membrane.
GO:00075690Progression of the cell from its inception to the end of its lifespan.
GO:00080370The process by which a cell in a multicellular organism interprets its surroundings.
GO:000821934The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
GO:000828333The multiplication or reproduction of cells, resulting in the expansion of a cell population.
GO:000984629The physiological and developmental changes that occur in a heterosporous plant pollen grain, beginning with hydration and terminating with the emergence of the pollen tube through the aperture.
GO:001011819The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).
GO:00103444The cellular process by which an seed oilbody is synthesized, aggregates, and bonds together. Seed oilbodies are simple organelles comprising a matrix of triglyceride surrounded by a phospholipid monolayer embedded and covered with unique proteins called oleosins. Seed oilbodies supply the energy requirements for the growth of the seedling after germination.
GO:00160370The reception of a photon by a cell.
GO:00160440A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO:001604923The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.
GO:0016192118The directed movement of substances into, out of or within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:00164587Any transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
GO:00197253Any process involved in the maintenance of an internal equilibrium at the level of the cell.
GO:00224020A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.
GO:00224060The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere.
GO:00226130The cellular process by which a complex containing RNA and proteins is synthesized, aggregates, and bonds together. Includes the synthesis of the constituent RNA and protein molecules.
GO:00300294Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins.
GO:00300300A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
GO:00321960Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites.
GO:00325060A cellular process that is involved in the division of the cytoplasm of a cell and its separation into two daughter cells.
GO:00325810The process by which a peroxisome is synthesized from the endoplasmic reticulum.
GO:00329403The controlled release of a substance by a cell.
GO:00330590The deposition or aggregation of coloring matter in a cell.
GO:00343300A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.
GO:00346210Any process carried out at the cellular level by which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a macromolecular complex.
GO:00349940A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center attachment site. A microtubule organizing center attachment site is a region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches.
GO:00352120Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.
GO:00430620A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
GO:00435800A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the periplasmic space, the region between the inner (cytoplasmic) and outer membrane in Gram-negative bacteria, or the inner membrane and cell wall in fungi.
GO:00440862The process by which a vacuole is synthesized, aggregates, and bonds together.
GO:00440910The process by which a membrane is synthesized, aggregates, and bonds together.
GO:004423742The chemical reactions and pathways by which individual cells transform chemical substances.
GO:00451030Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins.
GO:00452290A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.
GO:00469310The aggregation, arrangement and bonding together of a set of components to form a pore complex. A pore complex is a small opening in a membrane that allows the passage of liquids and/or gases.
GO:00486100A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular or single-celled organism.
GO:00488690A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.
GO:005130125The process resulting in the physical partitioning and separation of a cell into daughter cells.
GO:00516412Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within or in the membrane of a cell.
GO:00516510Any process by which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.
GO:00517160A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
GO:005508540The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute.
GO:00601440The set of cellular processes occurring in the host cell that contribute to the process of posttranscriptional gene inactivation ('silencing') both of viral gene(s), and host gene(s) homologous to the viral genes.
GO:00602420The cellular process by which cells stop growing or dividing in response to increased cell density.
GO:00603520The appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.
GO:00701930A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synaptonemal complex. A synaptonemal complex is a proteinaceous scaffold formed between homologous chromosomes during meiosis.
GO:00708820A cellular process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cell wall.





Comparison with co-expressed genes



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