Biological process to genes

Query process ID GO:0009060
Process name The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.
Organism Oryza sativa

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. H.G. Other DB
SOs01g0612200AK071340.1-Cytochrome c oxidase subunit Vb4e-17At1g80230cytochrome c oxidase family proteinO.I.H.G.
SOs03g0390400AB025187.1-Cytochrome c oxidase subunit 6b (OSJNBa0029H02.1protein) (OSJNBa0067K08.22 protein)7e-37At1g22450COX6B (CYTOCHROME C OXIDASE 6B)O.I.H.G.
SOs08g0496000AK103187.1-Cytochrome oxidase assembly family protein1e-12At5g56090COX15 (cytochrome c oxidase 15)O.I.H.G.

The upper GO terms

Process ID Gene number Process name
GO:00453330The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration).

The lower GO terms

Process ID Gene number Process name
GO:000609922A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO:00193320The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.
GO:00194090The metabolic process by which ammonia (NH3) is oxidized to nitrite (NO2) in the presence of oxygen; enzymatic reactions convert ammonia to hydrazine, and hydrazine to nitrite.
GO:00194100The metabolic process by which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.
GO:00194110The metabolic process by which ferrous ions (Fe2+) are oxidized to ferric ions (Fe3+) to generate energy, coupled to the reduction of carbon dioxide.
GO:00194120The oxidation of hydrogen (H2) to water (H2O), using oxygen (O2) as the electron acceptor. A hydrogenase enzyme binds H2 and the hydrogen atoms are passed through an electron transfer chain to O2 to form water.
GO:00435540The oxidation of arsenite to arsenate, using oxygen (O2) as the electron acceptor. Arsenite oxidase provides electrons to an electron carrier which transfers them to oxygen utilizing respiratory systems.

Genes co-expressed with Os01g0612200

Os01g0612200NF: 0.38%ile: 45.3SF: 0.22SP: 0.17SR: 0.33

Gene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene name
Os01g0612200AK071340.1-Cytochrome c oxidase subunit Vb4e-17At1g80230cytochrome c oxidase family proteinF:cytochrome-c oxidase activity;P:unknown;C:mitochondrial envelope, mitochondrion;MFPO
Os09g0361400AK060652.1-Voltage-dependent anion channel6e-1At5g15000-Encodes a ECA1 gametogenesis related family protein
Os02g0816800AK102271.1-Conserved hypothetical protein4e-24At2g20360binding / catalytic/ coenzyme bindingF:coenzyme binding, binding, catalytic activity;P:response to salt stress;C:mitochondrion, respiratory chain complex I, membrane;BOMFPA
Os08g0431500AK058993.1-Conserved hypothetical protein3e-20At4g16450unknown proteinF:molecular_function unknown;P:photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I, membrane;FP
Os07g0640100AK070897.1-Complex 1 LYR protein family protein7e-3At3g12260complex 1 family protein / LVR family proteinF:catalytic activity;P:unknown;C:mitochondrion, respiratory chain complex I, membrane;MFPO
Os06g0251100AK063780.1-Membrane attack complexcomponent/perforin/complement C9 family protein1e+0At5g41960unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P

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