Biological process to genes

Query process ID GO:0006606
Process name The directed movement of a protein from the cytoplasm to the nucleus.
Organism Arabidopsis thaliana

Click Gene ID to show a list of co-expressed genes.

ECC Gene ID Repr. ID Gene name Functional description O.I. H.G. Other DB
XAt1g27310839620NTF2A (NUCLEAR TRANSPORT FACTOR 2A)Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.O.I.H.G.
XAt1g27970839690NTF2B (NUCLEAR TRANSPORT FACTOR 2B)Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.O.I.H.G.
XAt2g31660817722SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).O.I.H.G.
SAt3g63130825488RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1)Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation.O.I.H.G.
SAt5g20010832123RAN-1A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.O.I.H.G.
SAt5g20020832124RAN2A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.O.I.H.G.
SAt5g55190835612RAN3 (RAN GTPASE 3)A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression.O.I.H.G.
CAt1g11570837700nuclear transport factor 2 (NTF2), putativeF:protein transporter activity;P:transport, protein import into nucleus;C:nucleus, intracellular;MFPOO.I.H.G.
CAt1g71480843489nuclear transport factor 2 (NTF2) family proteinF:protein transporter activity;P:transport, protein import into nucleus;C:chloroplast thylakoid membrane, nucleus, intracellular, chloroplast;PBOO.I.H.G.
CAt3g55540824719nuclear transport factor 2 (NTF2) family proteinF:protein transporter activity;P:transport, protein import into nucleus;C:nucleus, intracellular;PFMO.I.H.G.
CAt4g16143827302IMPA-2 (IMPORTIN ALPHA ISOFORM 2)Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
LAt1g02690839517IMPA-6 (IMPORTIN ALPHA ISOFORM 6)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
LAt3g05720819741IMPA-7 (IMPORTIN ALPHA ISOFORM 7)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
LAt3g06720819857IMPA-1 (IMPORTIN ALPHA ISOFORM 1)Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.
LAt5g49310834991IMPA-5 (IMPORTIN ALPHA ISOFORM 5)Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.O.I.H.G.



The upper GO terms

Process ID Gene number Process name
GO:00066059The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:00170382The directed movement of proteins into a cell or organelle.
GO:00345040A process by which a protein is transported to, or maintained in, a location within the nucleus.
GO:00511702The directed movement of substances into the nucleus.



The lower GO terms

Process ID Gene number Process name
GO:000005915The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins.
GO:00000603The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope.
GO:00000610The disaggregation of a protein complex composed of the nuclear localization sequence and the importin alpha, and importin beta proteins.
GO:00066070The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane.
GO:00066080The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.
GO:00066090The directed movement of a heterogeneous nuclear ribonucleoprotein complex from the cytoplasm into the nucleus, across the nuclear membrane.
GO:00066100The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane.
GO:00350480The directed movement of a pre-mRNA splicing factor from the cytoplasm into the nucleus, across the nuclear membrane.
GO:00429916The directed movement of a transcription factor from the cytoplasm to the nucleus.





Comparison with co-expressed genes



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