RnR The prediction of regulatory relationships associated with At5g62610

QueryAt5g62610
Descriptionbasic helix-loop-helix (bHLH) family protein
RAFL IDpda06837
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g62610

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g62610 162.3 100.0 1.000 basic helix-loop-helix (bHLH) family protein
At1g77690 47.0 100.0 0.486 LAX3 (LIKE AUX1 3)
At2g40610 35.1 100.0 0.494 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)
At5g22310 31.9 100.0 0.690 F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAV
At1g63710 28.8 100.0 0.268 CYP86A7
At1g48510 25.1 99.9 0.442 cytochrome c oxidase assembly protein surfeit-related
At3g07990 22.8 99.9 0.765 SCPL27 (serine carboxypeptidase-like 27)
At1g78490 21.6 99.9 0.607 CYP708A3
At5g23220 21.2 99.9 0.323 NIC3 (NICOTINAMIDASE 3)
At3g45780 21.0 99.9 0.690 PHOT1 (PHOTOTROPIN 1)
At2g24620 20.2 99.9 0.232 S-locus glycoprotein family protein
At1g75590 18.5 99.9 0.552 auxin-responsive family protein
At3g43430 17.7 99.9 0.506 zinc finger (C3HC4-type RING finger) family protein
At4g07370 17.4 99.9 0.098 transposable element gene
At4g03770 17.3 99.9 0.098 -
At2g16160 16.2 99.9 0.155 transposable element gene
At5g20820 16.2 99.9 0.438 auxin-responsive protein-related
At5g26060 15.9 99.9 0.030 S1 self-incompatibility protein-related
At3g30190 15.4 99.9 0.262 transposable element gene
At2g43060 15.3 99.9 0.568 transcription factor
At1g29490 15.1 99.9 0.229 auxin-responsive family protein
At1g74670 15.0 99.9 0.574 gibberellin-responsive protein, putative
At3g50750 15.0 99.9 0.697 brassinosteroid signalling positive regulator-related
At3g04250 14.8 99.9 0.212 F-box family protein-related

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 20.1 99.6 5/5 2 - - - - 126 117
GC-MS unknown 17.3 99.4 5/5 2 - - - - 97 115
GC-MS unknown 12.8 99.1 5/5 1 - - - - 103 89 147 117
GC-MS unknown 12.7 99.0 5/5 2 - - - - 147 103 205 319 374
GC-MS unknown 9.0 98.3 5/5 2 - - - - 159 85 111
LC-MS unknown 19.0 99.3 5/5 1.3 - - - 359.1581 360.1659
LC-MS unknown 7.5 98.2 2/5 1.4 - - - 539.2002 540.2080
LC-MS unknown 7.0 98.1 5/5 1.4 - - - 284.0909 285.0987
LC-MS unknown 6.8 98.0 4/5 1.6 - - - 315.1114 316.1192
LC-MS unknown 6.4 97.9 1/5 1.4 - - - 176.0326 177.0404
CE-MS unknown 47.1 99.9 1/5 2.0 - - - 252 251
CE-MS unknown 38.1 99.8 1/5 1.4 - - - 274 273
CE-MS unknown 15.0 99.3 4/5 1.5 - - - 96 95
CE-MS unknown 12.6 99.2 3/5 1.6 - - - 76 75
CE-MS unknown 10.4 99.0 1/5 1.7 - - - 329 328






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