RnR The prediction of regulatory relationships associated with At5g61420

QueryAt5g61420
DescriptionMYB28 (myb domain protein 28)
RAFL ID-
C.R.N
R.O.X.L.6/9 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g61420

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g22740 211.3 100.0 0.406 HMT3
At1g78370 206.8 100.0 0.791 ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)
At5g23010 206.3 100.0 0.776 MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1)
At1g16400 201.6 100.0 0.726 CYP79F2
At1g62560 199.2 100.0 0.806 FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3)
At2g41300 190.6 100.0 0.171 strictosidine synthase
At5g23020 185.5 100.0 0.531 IMS2 (2-ISOPROPYLMALATE SYNTHASE 2)
At2g43100 174.0 100.0 0.800 aconitase C-terminal domain-containing protein
At3g58990 169.8 100.0 0.781 aconitase C-terminal domain-containing protein
At5g61420 168.9 100.0 1.000 MYB28 (myb domain protein 28)
At2g39330 162.7 100.0 0.370 JAL23 (JACALIN-RELATED LECTIN 23)
At3g29732 154.0 100.0 0.224 transposable element gene
At4g13770 151.0 100.0 0.854 CYP83A1 (CYTOCHROME P450 83A1)
At3g19710 139.1 100.0 0.790 BCAT4 (BRANCHED-CHAIN AMINOTRANSFERASE4)
At4g39940 125.3 100.0 0.721 AKN2 (APS-kinase 2)
At1g18590 123.7 100.0 0.796 SOT17 (SULFOTRANSFERASE 17)
At5g27080 106.1 100.0 0.119 WD-40 repeat family protein
At2g10140 105.3 100.0 0.129 transposable element gene
At2g46650 104.6 100.0 0.728 CB5-C (CYTOCHROME B5 ISOFORM C)
At4g24130 103.4 100.0 0.267 F:unknown;P:biological_process unknown;C:nucleus;P
At4g12030 100.0 100.0 0.831 bile acid:sodium symporter family protein
At4g08000 99.6 100.0 0.119 transposable element gene
At1g31180 78.6 100.0 0.804 3-isopropylmalate dehydrogenase, chloroplast, putative
At1g65860 67.0 100.0 0.788 FMO GS-OX1 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1)
At1g39190 64.5 100.0 0.094 transposable element gene
At1g31290 64.2 100.0 0.113 PAZ domain-containing protein / piwi domain-containing protein
At1g62800 54.5 100.0 0.535 ASP4 (ASPARTATE AMINOTRANSFERASE 4)
At3g03190 43.2 100.0 0.732 ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11)
At4g03060 42.5 100.0 0.363 AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)
At2g14750 41.9 100.0 0.704 APK (APS KINASE)
At1g74090 40.6 100.0 0.862 SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)
At1g69920 36.5 100.0 0.132 ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)
At2g31790 34.4 100.0 0.840 UDP-glucoronosyl/UDP-glucosyl transferase family protein
At3g29670 34.1 100.0 0.386 transferase family protein
At1g69930 32.7 100.0 0.082 ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)
At2g05500 30.3 100.0 0.137 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g30530 29.1 100.0 0.682 defense-related protein, putative
At3g02020 28.3 100.0 0.847 AK3 (ASPARTATE KINASE 3)
At3g52690 27.1 99.9 0.108 -
At4g14680 24.2 99.9 0.591 APS3
At5g52390 23.3 99.9 0.218 photoassimilate-responsive protein, putative
At3g22890 22.8 99.9 0.722 APS1 (ATP SULFURYLASE 1)
At2g35210 19.4 99.9 0.050 RPA (ROOT AND POLLEN ARFGAP)
At5g35010 19.0 99.9 0.091 transposable element gene
At2g20610 18.7 99.9 0.814 SUR1 (SUPERROOT 1)
At4g35720 16.5 99.9 0.180 F:unknown;P:unknown;C:unknown;PO
At1g30710 16.3 99.9 0.006 FAD-binding domain-containing protein
At2g10630 16.2 99.9 0.202 transposable element gene
At2g04770 15.9 99.9 0.106 transposable element gene
At2g32610 15.7 99.9 0.087 ATCSLB01
At1g71120 15.3 99.9 0.098 GLIP6
At1g58360 15.2 99.9 0.618 AAP1 (AMINO ACID PERMEASE 1)
At1g68600 15.0 99.9 0.566 F:unknown;P:biological_process unknown;C:cellular_component unknown;BPFO
At3g23570 15.0 99.9 0.691 dienelactone hydrolase family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 27.8 99.8 5/5 1 - - - - 147
GC-MS unknown 19.9 99.6 5/5 1 - - - - 147 117 103 133 205
GC-MS unknown 17.3 99.4 5/5 2 - - - - 86 101 144
GC-MS unknown 16.0 99.4 5/5 2 - - - - 91 87 119
GC-MS unknown 14.3 99.2 5/5 2 - - - - 236
GC-MS unknown 13.6 99.1 5/5 1 - - - - 210 88 85
GC-MS unknown 13.4 99.1 5/5 2 - - - - 103 101 117 116
LC-MS unknown 149.0 99.9 1/5 3.0 - - - 191.1361 192.1439
LC-MS unknown 126.4 99.8 2/5 2.5 - - - 186.0347 187.0425
LC-MS unknown 73.7 99.8 3/5 2.0 - - - 386.1281 387.1359
LC-MS unknown 56.2 99.7 1/5 1.2 - - - 177.0835 178.0913
LC-MS unknown 29.5 99.6 3/5 1.0 - - - 235.1309 236.1387
CE-MS unknown 41.0 99.9 2/5 1.7 - - - 276 277
CE-MS unknown 26.3 99.7 1/5 1.3 - - - 179 180
CE-MS unknown 10.3 99.0 3/5 1.3 - - - 154 153
CE-MS unknown 9.0 98.8 1/5 2.0 - - - 84 85
CE-MS unknown 8.7 98.7 3/5 1.7 - - - 305 306






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