RnR The prediction of regulatory relationships associated with At5g60920

QueryAt5g60920
DescriptionCOB (COBRA)
RAFL IDpda07982
C.R.C
R.O.X.L.18/20 lines
P.O.X. 99.9

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g60920

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At3g63440 33.9 100.0 0.528 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6)
At2g44190 32.6 100.0 0.086 EDE1 (ENDOSPERM DEFECTIVE 1)
At3g60910 30.2 100.0 0.802 catalytic/ methyltransferase
At3g17050 26.3 99.9 0.237 transposable element gene
At5g60920 24.5 99.9 1.000 COB (COBRA)
At2g43390 20.4 99.9 0.275 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g15010 15.1 99.9 0.062 thionin, putative
At5g55450 14.1 99.8 0.561 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At2g41260 11.5 99.8 0.054 M17
At2g29490 11.3 99.8 0.439 ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 18.9 99.5 5/5 1 - - - - 89 217
GC-MS unknown 13.9 99.2 4/5 2 - - - - 103 97 83 383 173
GC-MS unknown 12.9 99.1 3/5 2 - - - - 338 368 323 353 279 249
GC-MS unknown 12.0 99.0 4/5 1 - - - - 87 217
GC-MS unknown 9.3 98.4 5/5 1 - - - - 103 101 117 116 89
LC-MS unknown 57.0 99.7 1/5 1.0 - - - 160.0558 161.0636
LC-MS unknown 40.6 99.7 1/5 1.3 - - - 650.2846 651.2924
LC-MS unknown 38.7 99.6 2/5 1.4 - - - 279.0797 280.0875
LC-MS unknown 25.2 99.5 1/5 1.5 - - - 301.0607 302.0685
LC-MS unknown 20.3 99.4 1/5 1.4 - - - 520.2025 521.2103
LC-MS unknown 19.8 99.4 1/5 1.0 - - - 206.0592 207.0670
LC-MS unknown 16.7 99.3 1/5 1.2 - - - 518.2012 519.2090
LC-MS unknown 14.6 99.1 1/5 1.9 - - - 668.2782 669.2860
CE-MS unknown 36.8 99.8 5/5 1.3 - - - 88 87
CE-MS unknown 30.1 99.8 5/5 1.3 - - - 331 332
CE-MS unknown 22.6 99.6 5/5 1.5 - - - 489 488
CE-MS unknown 20.2 99.5 5/5 1.5 - - - 459 458
CE-MS unknown 14.5 99.3 1/5 1.8 - - - 146 145
CE-MS unknown 12.4 99.2 1/5 1.9 - - - 123 124






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