RnR The prediction of regulatory relationships associated with At5g16540

QueryAt5g16540
DescriptionZFN3 (ZINC FINGER NUCLEASE 3)
RAFL IDpda09257
C.R.D
R.O.X.L.10/10 lines
P.O.X. 99.7

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g16540

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g49240 22.7 99.9 0.119 APRR4 (PSEUDO-RESPONSE REGULATOR 4)
At5g60070 19.1 99.9 0.716 ankyrin repeat family protein
At5g38035 17.9 99.9 0.076 transposable element gene
At1g32670 15.1 99.9 0.160 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g10620 14.2 99.8 0.927 protein kinase family protein
At1g59850 14.1 99.8 0.127 binding
At4g16020 13.8 99.8 0.018 -
At2g04310 13.1 99.8 0.057 transposable element gene
At1g50930 12.7 99.8 0.062 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFVB
At1g56620 12.3 99.8 0.010 pectinesterase inhibitor domain-containing protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 77.2 100.0 4/5 2 - - - -
GC-MS unknown 20.4 99.6 5/5 2 - - - -
GC-MS unknown 20.0 99.6 5/5 1 - - - - 147 221 281 355
GC-MS unknown 12.6 99.0 5/5 2 - - - -
GC-MS unknown 11.7 98.9 5/5 1 - - - - 147 355 221 281
LC-MS unknown 7.5 98.2 1/5 1.5 - - - 356.1149 357.1227
LC-MS unknown 7.2 98.1 1/5 1.5 - - - 507.2049 508.2127
LC-MS unknown 6.1 97.8 4/5 1.3 - - - 208.0384 209.0462
LC-MS unknown 5.4 97.5 1/5 1.8 - - - 472.1753 473.1831
LC-MS unknown 5.2 97.4 4/5 1.6 - - - 1057.4998 1058.5076
CE-MS unknown 25.4 99.7 5/5 1.8 - - - 119 118
CE-MS unknown 21.3 99.6 1/5 1.5 - - - 307 308
CE-MS unknown 17.0 99.4 5/5 1.5 - - - 125 126
CE-MS unknown 16.6 99.4 5/5 1.4 - - - 125 126
CE-MS unknown 14.9 99.3 5/5 1.4 - - - 213 214
CE-MS unknown 12.7 99.2 5/5 1.1 - - - 181 182
CE-MS unknown 11.0 99.0 5/5 1.5 - - - 73 74






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