RnR The prediction of regulatory relationships associated with At5g12870

QueryAt5g12870
DescriptionMYB46 (MYB DOMAIN PROTEIN 46)
RAFL IDpda09387
C.R.C
R.O.X.L.10/10 lines
P.O.X. 100.0

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g12870

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g12870 130.5 100.0 1.000 MYB46 (MYB DOMAIN PROTEIN 46)
At4g01390 34.8 100.0 0.216 -
At2g03410 26.6 99.9 0.048 Mo25 family protein
At4g28380 23.3 99.9 0.432 leucine-rich repeat family protein
At1g60240 23.1 99.9 0.030 apical meristem formation protein-related
At5g58050 20.5 99.9 0.032 SVL4 (SHV3-LIKE 4)
At4g04270 19.1 99.9 0.222 transposable element gene
At2g14590 18.7 99.9 0.180 transposable element gene
At3g02310 17.9 99.9 0.181 SEP2 (SEPALLATA 2)
At2g24710 17.2 99.9 0.220 ATGLR2.3
At2g16160 16.8 99.9 0.304 transposable element gene
At4g24450 16.0 99.9 0.312 PWD (PHOSPHOGLUCAN, WATER DIKINASE)
At1g62510 15.7 99.9 0.174 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
At4g10410 15.7 99.9 0.351 -
At2g01029 15.5 99.9 0.235 transposable element gene
At1g03720 15.3 99.9 0.375 cathepsin-related

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 40.3 99.9 5/5 1 - - - - 85 99 113
GC-MS unknown 26.1 99.7 5/5 2 - - - - 85 99 110
GC-MS unknown 21.2 99.6 5/5 2 - - - - 85 83 82
GC-MS unknown 19.1 99.5 5/5 1 - - - - 85 99 113 174
GC-MS unknown 16.4 99.4 5/5 1 - - - - 85 99 113 127
GC-MS unknown 16.0 99.4 5/5 1 - - - - 149 167
GC-MS unknown 15.5 99.3 5/5 1 - - - - 85 99 113 141
GC-MS unknown 15.5 99.3 5/5 1 - - - - 98
GC-MS unknown 15.1 99.3 5/5 2 - - - - 89 175 159
GC-MS unknown 14.8 99.3 5/5 2 - - - - 85 154 110
GC-MS unknown 14.7 99.3 5/5 1 - - - - 85 99 113
GC-MS unknown 13.5 99.1 2/5 1 - - - - 319
GC-MS unknown 13.2 99.1 5/5 1 - - - - 207 147 133 239
GC-MS D-Raffinose 12.4 99.0 4/5 2 KPC01369 C00492 C18H32O16 504.169035 217 103 147 129 361
LC-MS unknown 3.5 96.0 3/5 1.3 - - - 147.0516 148.0594
LC-MS unknown 3.4 95.8 4/5 1.5 - - - 598.0595 599.0673
LC-MS unknown 3.3 95.7 1/5 2.0 - - - 544.1977 545.2055
LC-MS unknown 3.1 95.4 5/5 1.4 - - - 406.0336 407.0414
CE-MS unknown 36.9 99.8 1/5 2.0 - - - 334 333
CE-MS unknown 32.9 99.8 1/5 2.0 - - - 259 258
CE-MS unknown 12.2 99.1 1/5 1.4 - - - 118 117
CE-MS unknown 8.2 98.6 1/5 2.1 - - - 244 243
CE-MS unknown 8.0 98.6 2/5 1.9 - - - 243 244






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