RnR The prediction of regulatory relationships associated with At5g12850

QueryAt5g12850
Descriptionzinc finger (CCCH-type) family protein
RAFL ID-
C.R.N
R.O.X.L.10/10 lines
P.O.X. 98.1

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g12850

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g42230 20.4 99.9 0.323 scpl41 (serine carboxypeptidase-like 41)
At1g11610 14.1 99.8 0.235 CYP71A18
At5g58850 12.0 99.8 0.186 MYB119 (MYB DOMAIN PROTEIN 119)
At2g10660 10.9 99.7 0.219 transposable element gene
At2g39790 10.7 99.7 0.125 mitochondrial glycoprotein family protein / MAM33 family protein
At3g02310 10.2 99.7 0.260 SEP2 (SEPALLATA 2)
At5g60890 10.1 99.7 0.599 MYB34 (MYB DOMAIN PROTEIN 34)
At1g75600 9.3 99.7 0.101 histone H3.2, putative
At2g35210 9.2 99.6 0.096 RPA (ROOT AND POLLEN ARFGAP)
At1g34590 8.7 99.6 0.282 transposable element gene

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 133.9 100.0 5/5 2 - - - - 147 103 129 217 354
GC-MS L-Tryptophan 21.3 99.6 5/5 2 KPC00738 C00078 C11H12N2O2 204.0898776 202
GC-MS N-Methylalanine 20.1 99.6 5/5 2 KPC01450 C02721 C4H9NO2 103.0633285 130 89
GC-MS unknown 18.3 99.5 5/5 2 - - - - 131 132 147
GC-MS unknown 11.1 98.8 5/5 2 - - - - 131 147
LC-MS unknown 28.4 99.5 1/5 1.3 - - - 312.1457 313.1535
LC-MS unknown 20.8 99.4 4/5 1.4 - - - 576.2060 577.2138
LC-MS unknown 13.9 99.1 5/5 1.3 - - - 289.0822 290.0900
LC-MS unknown 11.9 98.9 4/5 1.0 - - - 730.1832 731.1910
LC-MS unknown 11.8 98.9 5/5 1.4 - - - 284.0909 285.0987
CE-MS unknown 184.5 100.0 3/5 2.0 - - - 459 458
CE-MS unknown 162.6 100.0 1/5 1.4 - - - 135 136
CE-MS unknown 128.7 100.0 2/5 1.7 - - - 425 424
CE-MS unknown 100.9 100.0 3/5 1.8 - - - 177 178
CE-MS unknown 96.9 100.0 3/5 2.5 - - - 364 363
CE-MS unknown 39.3 99.9 3/5 1.3 - - - 441 440
CE-MS unknown 39.1 99.9 1/5 1.5 - - - 149 150
CE-MS unknown 31.7 99.8 1/5 1.7 - - - 221 220
CE-MS unknown 18.4 99.5 4/5 1.7 - - - 507 506
CE-MS unknown 15.6 99.4 5/5 1.7 - - - 136 137
CE-MS unknown 12.9 99.2 1/5 1.4 - - - 184 185
CE-MS unknown 11.4 99.1 5/5 2.0 - - - 137 136






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