RnR The prediction of regulatory relationships associated with At5g12840

QueryAt5g12840
DescriptionNF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)
RAFL IDpda02405
C.R.F
R.O.X.L.9/9 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g12840

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At1g30760 65.8 100.0 0.266 FAD-binding domain-containing protein
At5g12840 53.5 100.0 1.000 NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)
At1g75830 45.5 100.0 0.178 LCR67
At1g78990 19.8 99.9 0.289 transferase family protein
At1g50590 16.4 99.9 0.599 pirin, putative
At2g19700 15.1 99.9 0.138 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g03860 14.7 99.9 0.201 MLS (MALATE SYNTHASE)
At2g14300 14.5 99.8 0.325 transposable element gene
At2g15780 14.5 99.8 0.242 glycine-rich protein
At2g40530 14.5 99.8 0.467 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 50.8 99.9 4/5 2 - - - - 130 174 151
GC-MS unknown 31.8 99.8 5/5 1 - - - - 85 174 154
GC-MS unknown 21.7 99.6 5/5 2 - - - - 147 204 361 217
GC-MS unknown 19.7 99.6 1/5 2 - - - - 174 86 100
GC-MS unknown 17.9 99.5 5/5 3 - - - - 91 135 104 115 162 240
GC-MS unknown 14.6 99.2 5/5 2 - - - - 204 147 217 361
GC-MS unknown 14.0 99.2 5/5 1 - - - - 147 117 103 292
GC-MS unknown 13.4 99.1 5/5 2 - - - - 107 92
LC-MS unknown 72.9 99.8 2/5 1.1 - - - 398.1673 399.1751
LC-MS unknown 67.8 99.8 1/5 1.6 - - - 1057.4998 1058.5076
LC-MS unknown 33.2 99.6 5/5 1.4 - - - 715.2887 716.2965
LC-MS unknown 30.1 99.6 4/5 1.8 - - - 555.2328 556.2406
LC-MS unknown 29.5 99.6 2/5 1.3 - - - 650.2846 651.2924
LC-MS unknown 27.2 99.5 5/5 1.6 - - - 733.2996 734.3074
LC-MS unknown 25.7 99.5 5/5 1.9 - - - 1057.4277 1058.4355
LC-MS unknown 20.4 99.4 5/5 1.6 - - - 747.2754 748.2832
LC-MS unknown 19.6 99.4 5/5 1.6 - - - 310.1220 311.1298
LC-MS unknown 18.1 99.3 5/5 1.5 - - - 340.1316 341.1394
LC-MS unknown 18.1 99.3 3/5 1.8 - - - 1059.4017 1060.4095
LC-MS unknown 17.7 99.3 2/5 1.7 - - - 304.0661 305.0739
LC-MS unknown 16.8 99.3 4/5 1.4 - - - 699.2794 700.2872
LC-MS unknown 14.7 99.1 4/5 1.5 - - - 365.1687 366.1765
LC-MS unknown 13.7 99.1 1/5 1.2 - - - 372.1271 373.1349
LC-MS unknown 12.9 99.0 4/5 1.3 - - - 351.1533 352.1611
LC-MS unknown 12.9 99.0 4/5 1.5 - - - 537.2218 538.2296
LC-MS unknown 12.1 99.0 5/5 1.4 - - - 537.2207 538.2285
CE-MS unknown 40.8 99.9 2/5 1.3 - - - 74 73
CE-MS unknown 21.5 99.6 5/5 1.5 - - - 148 147
CE-MS unknown 20.2 99.5 5/5 1.6 - - - 130 129
CE-MS unknown 16.4 99.4 2/5 2.0 - - - 163 164
CE-MS unknown 13.8 99.3 5/5 1.8 - - - 132 131
CE-MS unknown 12.8 99.2 3/5 1.6 - - - 76 75
CE-MS unknown 12.1 99.1 5/5 1.6 - - - 224 223
CE-MS unknown 11.5 99.1 5/5 1.6 - - - 244 243
CE-MS unknown 10.7 99.0 5/5 1.3 - - - 88 87
CE-MS unknown 10.5 99.0 1/5 1.2 - - - 185 184






Back to the RnR portal site

Back to the KAGIANA project homepage