RnR The prediction of regulatory relationships associated with At5g11060

QueryAt5g11060
DescriptionKNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4)
RAFL IDpda11325
C.R.S
R.O.X.L.5/5 lines
P.O.X. 99.9

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Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene
Orangegene
Yellowmetabolite, lipid mode, GC-MS
Cyanmetabolite, polar mode, GC-MS
Bluemetabolite, LC-MS
Greenmetabolite, negative mode, CE-MS
Limegreenmetabolite, positive mode, CE-MS



Candidate elements regulated by At5g11060

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g40560 29.9 100.0 0.198 DegP13 (DegP protease 13)
At3g31940 28.7 100.0 0.135 transposable element gene
At2g29410 25.6 99.9 0.167 MTPB1 (METAL TOLERANCE PROTEIN B1)
At5g11060 22.2 99.9 1.000 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4)
At5g62250 20.9 99.9 0.150 MAP65-9 (MICROTUBULE-ASSOCIATED PROTEIN 65-9)
At1g36030 20.0 99.9 0.163 F-box family protein
At4g04430 19.1 99.9 0.049 transposable element gene
At5g60070 18.0 99.9 0.240 ankyrin repeat family protein
At3g20180 17.0 99.9 0.182 metal ion binding
At3g50120 16.5 99.9 0.511 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g15360 16.4 99.9 0.129 SHN1 (SHINE 1)
At4g23680 16.4 99.9 0.253 major latex protein-related / MLP-related
At3g30490 16.2 99.9 0.113 transposable element gene
At3g26860 16.1 99.9 0.032 -
At2g07700 16.0 99.9 0.228 transposable element gene
At2g23210 15.8 99.9 0.099 UDP-glycosyltransferase/ transferase, transferring glycosyl groups
At1g27620 15.6 99.9 0.195 transferase family protein
At5g39870 15.6 99.9 0.065 F:unknown;P:unknown;C:endomembrane system;POBMA
At2g43580 15.5 99.9 0.234 chitinase, putative

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 50.7 99.9 5/5 1 - - - - 174 103 147 204 217 307
GC-MS unknown 41.6 99.9 5/5 1 - - - - 87 96 114
GC-MS unknown 20.7 99.6 5/5 1 - - - - 102 96
GC-MS unknown 18.1 99.5 5/5 2 - - - - 130 86 100 144 221
GC-MS unknown 14.4 99.2 5/5 3 - - - - 91 135 104 115 162 240
GC-MS unknown 14.1 99.2 5/5 1 - - - - 156 116 147 128 361
GC-MS unknown 13.1 99.1 5/5 2 - - - - 83 145 103 98 157 161
GC-MS unknown 13.0 99.1 5/5 2 - - - - 204 147 217 361
GC-MS unknown 12.2 99.0 5/5 1 - - - - 145 85 91 157
LC-MS unknown 16.7 99.3 4/5 1.4 - - - 345.1435 346.1513
LC-MS unknown 13.3 99.0 1/5 1.3 - - - 214.0059 215.0137
LC-MS unknown 10.2 98.7 4/5 1.2 - - - 380.1103 381.1181
LC-MS unknown 9.8 98.7 4/5 1.4 - - - 537.2207 538.2285
LC-MS unknown 8.3 98.4 2/5 1.2 - - - 311.1197 312.1275
CE-MS unknown 31.2 99.8 5/5 1.5 - - - 489 488
CE-MS unknown 28.5 99.7 3/5 1.3 - - - 74 73
CE-MS unknown 18.3 99.5 5/5 1.1 - - - 197 196
CE-MS unknown 16.7 99.4 5/5 1.5 - - - 523 522
CE-MS unknown 14.2 99.3 5/5 1.8 - - - 174 173
CE-MS unknown 10.4 99.0 5/5 1.6 - - - 130 129






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