RnR: Regulatory-network Research using Arabidopsis T87 cultured cells

The prediction of regulatory relationships associated with At5g08750

Query At5g08750

Description zinc finger (C3HC4-type RING finger) family protein

RAFL ID pda11021

C.R. C

R.O.X.L. 10/10 lines

P.O.X. 99.7

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Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroon over-expressed gene

Orange gene

Yellow metabolite, lipid mode, GC-MS

Cyan metabolite, polar mode, GC-MS

Blue metabolite, LC-MS

Green metabolite, negative mode, CE-MS

Limegreen metabolite, positive mode, CE-MS

Candidate elements regulated by At5g08750

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias

At2g30650 138.6 100.0 0.521 catalytic

At4g31730 126.9 100.0 0.448 GDU1 (GLUTAMINE DUMPER 1)

At2g30670 120.8 100.0 0.198 tropinone reductase, putative / tropine dehydrogenase, putative

At5g22555 113.6 100.0 0.180 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At4g33550 100.0 100.0 0.352 lipid binding

At5g52680 93.2 100.0 0.261 heavy-metal-associated domain-containing protein

At3g50200 90.4 100.0 0.347 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At4g19720 83.5 100.0 0.480 glycosyl hydrolase family 18 protein

At4g27850 79.9 100.0 0.572 proline-rich family protein

At5g52710 79.5 100.0 0.330 heavy-metal-associated domain-containing protein

At3g23190 77.7 100.0 0.309 lesion inducing protein-related

At2g30660 73.9 100.0 0.401 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative

At3g50190 69.7 100.0 0.318 F:unknown;P:biological_process unknown;C:chloroplast;PO

At4g33420 64.8 100.0 0.469 peroxidase, putative

At5g52690 59.4 100.0 0.306 heavy-metal-associated domain-containing protein

At1g01070 57.9 100.0 0.603 nodulin MtN21 family protein

At4g37430 50.1 100.0 0.532 CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2)

At3g20590 49.6 100.0 0.500 non-race specific disease resistance protein, putative

At3g45840 47.2 100.0 0.402 protein binding / zinc ion binding

At5g11920 46.5 100.0 0.413 AtcwINV6 (6-&1-fructan exohydrolase)

At1g58300 46.4 100.0 0.403 ho4 (HEME OXYGENASE 4)

At4g25090 45.3 100.0 0.348 respiratory burst oxidase, putative / NADPH oxidase, putative

At4g10500 45.1 100.0 0.337 oxidoreductase, 2OG-Fe(II) oxygenase family protein

At1g29020 44.9 100.0 0.283 calcium-binding EF hand family protein

At4g25790 43.8 100.0 0.345 allergen V5/Tpx-1-related family protein

At5g59490 43.8 100.0 0.324 haloacid dehalogenase-like hydrolase family protein

At3g12230 42.1 100.0 0.234 scpl14 (serine carboxypeptidase-like 14)

At5g52670 41.1 100.0 0.233 heavy-metal-associated domain-containing protein

At5g22530 38.4 100.0 0.324 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO

At4g19730 38.1 100.0 0.131 glycosyl hydrolase family 18 protein

At1g24320 36.7 100.0 0.402 alpha-glucosidase, putative

At5g13320 36.3 100.0 0.188 PBS3 (AVRPPHB SUSCEPTIBLE 3)

At1g44050 35.5 100.0 0.322 DC1 domain-containing protein

At4g14010 35.4 100.0 0.540 RALFL32 (ralf-like 32)

At3g47540 34.7 100.0 0.379 chitinase, putative

At5g52760 34.3 100.0 0.186 heavy-metal-associated domain-containing protein

At5g39090 33.8 100.0 0.638 transferase family protein

At2g44240 33.1 100.0 0.151 F:unknown;P:response to oxidative stress;C:endomembrane system;PFB

At3g47040 32.6 100.0 0.402 glycosyl hydrolase family 3 protein

At4g21960 32.0 100.0 0.697 PRXR1

At3g11390 31.7 100.0 0.450 DC1 domain-containing protein

At1g15640 30.4 100.0 0.428 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At1g70690 29.5 100.0 0.513 HWI1 (HOPW1-1-INDUCED GENE1)

At3g11340 29.1 100.0 0.375 UDP-glucoronosyl/UDP-glucosyl transferase family protein

At5g67160 29.0 100.0 0.737 EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1)

At5g11420 28.2 100.0 0.556 -

At5g25620 27.7 100.0 0.595 YUC6 (YUCCA6)

At3g01350 27.2 99.9 0.712 proton-dependent oligopeptide transport (POT) family protein

At5g66670 27.2 99.9 0.468 F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB

At2g40460 27.1 99.9 0.608 proton-dependent oligopeptide transport (POT) family protein

At1g52140 26.8 99.9 0.601 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At3g17150 26.8 99.9 0.024 enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor

At5g39110 25.0 99.9 0.262 germin-like protein, putative

At3g14680 24.6 99.9 0.387 CYP72A14

At2g21900 24.5 99.9 0.291 WRKY59

At3g09940 24.1 99.9 0.367 MDHAR (MONODEHYDROASCORBATE REDUCTASE)

At5g52720 23.7 99.9 0.284 metal ion binding

At5g07030 23.6 99.9 0.605 aspartic-type endopeptidase

At1g69150 23.1 99.9 0.362 DC1 domain-containing protein

At5g44400 22.9 99.9 0.585 FAD-binding domain-containing protein

At5g58500 22.8 99.9 0.417 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)

At3g13090 22.6 99.9 0.502 ATMRP8

At3g60470 22.4 99.9 0.407 F:unknown;P:biological_process unknown;C:cellular_component unknown;P

At5g53710 22.0 99.9 0.428 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

At1g71530 21.6 99.9 0.257 protein kinase family protein

At4g07840 21.6 99.9 0.373 transposable element gene

At1g21525 21.5 99.9 0.341 -

At3g27070 21.5 99.9 0.313 TOM20-1 (translocase outer membrane 20-1)

At3g07600 21.1 99.9 0.356 heavy-metal-associated domain-containing protein

At4g10510 20.9 99.9 0.325 subtilase family protein

At4g08750 20.2 99.9 0.325 transposable element gene

At5g15830 20.2 99.9 0.465 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)

At2g43910 19.9 99.9 0.627 thiol methyltransferase, putative

At5g41070 19.9 99.9 0.683 DRB5 (DSRNA-BINDING PROTEIN 5)

At4g03690 19.4 99.9 0.258 transposable element gene

At3g48410 19.2 99.9 0.669 hydrolase, alpha/beta fold family protein

At5g45440 19.2 99.9 0.541 disease resistance protein-related

At2g02250 19.1 99.9 0.425 AtPP2-B2 (Phloem protein 2-B2)

At3g22910 18.5 99.9 0.283 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)

At1g30990 18.4 99.9 0.331 major latex protein-related / MLP-related

At2g02580 18.3 99.9 0.288 CYP71B9

At1g80320 18.2 99.9 0.359 oxidoreductase, 2OG-Fe(II) oxygenase family protein

At1g61080 18.1 99.9 0.151 proline-rich family protein

At2g21140 18.0 99.9 0.371 ATPRP2 (PROLINE-RICH PROTEIN 2)

At5g07850 18.0 99.9 0.228 transferase family protein

At5g41280 17.9 99.9 0.260 -

At1g04490 17.5 99.9 0.397 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At5g42290 17.4 99.9 0.198 transcription activator-related

At3g17180 17.3 99.9 0.671 scpl33 (serine carboxypeptidase-like 33)

At4g37670 17.0 99.9 0.657 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein

At5g64890 17.0 99.9 0.230 PROPEP2 (Elicitor peptide 2 precursor)

At4g37650 16.8 99.9 0.492 SHR (SHORT ROOT)

At3g47510 16.6 99.9 0.560 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P

At5g03150 16.6 99.9 0.537 JKD (JACKDAW)

At5g38080 15.9 99.9 0.396 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P

At3g22920 15.7 99.9 0.578 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative

At3g21070 15.6 99.9 0.401 NADK1 (NAD KINASE 1)

At3g13100 15.4 99.9 0.462 ATMRP7

At5g45460 15.4 99.9 0.609 F:unknown;P:biological_process unknown;C:cellular_component unknown;P

At1g65880 15.3 99.9 0.224 BZO1 (BENZOYLOXYGLUCOSINOLATE 1)

At2g05020 15.2 99.9 0.359 transposable element gene

At2g27370 15.2 99.9 0.284 integral membrane family protein

At5g65790 15.0 99.9 0.447 MYB68 (MYB DOMAIN PROTEIN 68)

At1g59780 14.9 99.9 0.669 disease resistance protein (CC-NBS-LRR class), putative

At2g21560 14.6 99.9 0.590 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV

At2g40750 14.6 99.9 0.363 WRKY54

At3g59030 14.6 99.9 0.437 TT12 (TRANSPARENT TESTA 12)

At5g18870 14.6 99.9 0.353 inosine-uridine preferring nucleoside hydrolase-related

Regulated gene	Std.R.	P.R.	Co-X	Gene name/alias
At2g30650	138.6	100.0	0.521	catalytic
At4g31730	126.9	100.0	0.448	GDU1 (GLUTAMINE DUMPER 1)
At2g30670	120.8	100.0	0.198	tropinone reductase, putative / tropine dehydrogenase, putative
At5g22555	113.6	100.0	0.180	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g33550	100.0	100.0	0.352	lipid binding
At5g52680	93.2	100.0	0.261	heavy-metal-associated domain-containing protein
At3g50200	90.4	100.0	0.347	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At4g19720	83.5	100.0	0.480	glycosyl hydrolase family 18 protein
At4g27850	79.9	100.0	0.572	proline-rich family protein
At5g52710	79.5	100.0	0.330	heavy-metal-associated domain-containing protein
At3g23190	77.7	100.0	0.309	lesion inducing protein-related
At2g30660	73.9	100.0	0.401	3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative
At3g50190	69.7	100.0	0.318	F:unknown;P:biological_process unknown;C:chloroplast;PO
At4g33420	64.8	100.0	0.469	peroxidase, putative
At5g52690	59.4	100.0	0.306	heavy-metal-associated domain-containing protein
At1g01070	57.9	100.0	0.603	nodulin MtN21 family protein
At4g37430	50.1	100.0	0.532	CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2)
At3g20590	49.6	100.0	0.500	non-race specific disease resistance protein, putative
At3g45840	47.2	100.0	0.402	protein binding / zinc ion binding
At5g11920	46.5	100.0	0.413	AtcwINV6 (6-&1-fructan exohydrolase)
At1g58300	46.4	100.0	0.403	ho4 (HEME OXYGENASE 4)
At4g25090	45.3	100.0	0.348	respiratory burst oxidase, putative / NADPH oxidase, putative
At4g10500	45.1	100.0	0.337	oxidoreductase, 2OG-Fe(II) oxygenase family protein
At1g29020	44.9	100.0	0.283	calcium-binding EF hand family protein
At4g25790	43.8	100.0	0.345	allergen V5/Tpx-1-related family protein
At5g59490	43.8	100.0	0.324	haloacid dehalogenase-like hydrolase family protein
At3g12230	42.1	100.0	0.234	scpl14 (serine carboxypeptidase-like 14)
At5g52670	41.1	100.0	0.233	heavy-metal-associated domain-containing protein
At5g22530	38.4	100.0	0.324	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO
At4g19730	38.1	100.0	0.131	glycosyl hydrolase family 18 protein
At1g24320	36.7	100.0	0.402	alpha-glucosidase, putative
At5g13320	36.3	100.0	0.188	PBS3 (AVRPPHB SUSCEPTIBLE 3)
At1g44050	35.5	100.0	0.322	DC1 domain-containing protein
At4g14010	35.4	100.0	0.540	RALFL32 (ralf-like 32)
At3g47540	34.7	100.0	0.379	chitinase, putative
At5g52760	34.3	100.0	0.186	heavy-metal-associated domain-containing protein
At5g39090	33.8	100.0	0.638	transferase family protein
At2g44240	33.1	100.0	0.151	F:unknown;P:response to oxidative stress;C:endomembrane system;PFB
At3g47040	32.6	100.0	0.402	glycosyl hydrolase family 3 protein
At4g21960	32.0	100.0	0.697	PRXR1
At3g11390	31.7	100.0	0.450	DC1 domain-containing protein
At1g15640	30.4	100.0	0.428	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g70690	29.5	100.0	0.513	HWI1 (HOPW1-1-INDUCED GENE1)
At3g11340	29.1	100.0	0.375	UDP-glucoronosyl/UDP-glucosyl transferase family protein
At5g67160	29.0	100.0	0.737	EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1)
At5g11420	28.2	100.0	0.556	-
At5g25620	27.7	100.0	0.595	YUC6 (YUCCA6)
At3g01350	27.2	99.9	0.712	proton-dependent oligopeptide transport (POT) family protein
At5g66670	27.2	99.9	0.468	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB
At2g40460	27.1	99.9	0.608	proton-dependent oligopeptide transport (POT) family protein
At1g52140	26.8	99.9	0.601	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g17150	26.8	99.9	0.024	enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor
At5g39110	25.0	99.9	0.262	germin-like protein, putative
At3g14680	24.6	99.9	0.387	CYP72A14
At2g21900	24.5	99.9	0.291	WRKY59
At3g09940	24.1	99.9	0.367	MDHAR (MONODEHYDROASCORBATE REDUCTASE)
At5g52720	23.7	99.9	0.284	metal ion binding
At5g07030	23.6	99.9	0.605	aspartic-type endopeptidase
At1g69150	23.1	99.9	0.362	DC1 domain-containing protein
At5g44400	22.9	99.9	0.585	FAD-binding domain-containing protein
At5g58500	22.8	99.9	0.417	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)
At3g13090	22.6	99.9	0.502	ATMRP8
At3g60470	22.4	99.9	0.407	F:unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g53710	22.0	99.9	0.428	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At1g71530	21.6	99.9	0.257	protein kinase family protein
At4g07840	21.6	99.9	0.373	transposable element gene
At1g21525	21.5	99.9	0.341	-
At3g27070	21.5	99.9	0.313	TOM20-1 (translocase outer membrane 20-1)
At3g07600	21.1	99.9	0.356	heavy-metal-associated domain-containing protein
At4g10510	20.9	99.9	0.325	subtilase family protein
At4g08750	20.2	99.9	0.325	transposable element gene
At5g15830	20.2	99.9	0.465	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)
At2g43910	19.9	99.9	0.627	thiol methyltransferase, putative
At5g41070	19.9	99.9	0.683	DRB5 (DSRNA-BINDING PROTEIN 5)
At4g03690	19.4	99.9	0.258	transposable element gene
At3g48410	19.2	99.9	0.669	hydrolase, alpha/beta fold family protein
At5g45440	19.2	99.9	0.541	disease resistance protein-related
At2g02250	19.1	99.9	0.425	AtPP2-B2 (Phloem protein 2-B2)
At3g22910	18.5	99.9	0.283	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)
At1g30990	18.4	99.9	0.331	major latex protein-related / MLP-related
At2g02580	18.3	99.9	0.288	CYP71B9
At1g80320	18.2	99.9	0.359	oxidoreductase, 2OG-Fe(II) oxygenase family protein
At1g61080	18.1	99.9	0.151	proline-rich family protein
At2g21140	18.0	99.9	0.371	ATPRP2 (PROLINE-RICH PROTEIN 2)
At5g07850	18.0	99.9	0.228	transferase family protein
At5g41280	17.9	99.9	0.260	-
At1g04490	17.5	99.9	0.397	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g42290	17.4	99.9	0.198	transcription activator-related
At3g17180	17.3	99.9	0.671	scpl33 (serine carboxypeptidase-like 33)
At4g37670	17.0	99.9	0.657	GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein
At5g64890	17.0	99.9	0.230	PROPEP2 (Elicitor peptide 2 precursor)
At4g37650	16.8	99.9	0.492	SHR (SHORT ROOT)
At3g47510	16.6	99.9	0.560	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P
At5g03150	16.6	99.9	0.537	JKD (JACKDAW)
At5g38080	15.9	99.9	0.396	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At3g22920	15.7	99.9	0.578	peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative
At3g21070	15.6	99.9	0.401	NADK1 (NAD KINASE 1)
At3g13100	15.4	99.9	0.462	ATMRP7
At5g45460	15.4	99.9	0.609	F:unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g65880	15.3	99.9	0.224	BZO1 (BENZOYLOXYGLUCOSINOLATE 1)
At2g05020	15.2	99.9	0.359	transposable element gene
At2g27370	15.2	99.9	0.284	integral membrane family protein
At5g65790	15.0	99.9	0.447	MYB68 (MYB DOMAIN PROTEIN 68)
At1g59780	14.9	99.9	0.669	disease resistance protein (CC-NBS-LRR class), putative
At2g21560	14.6	99.9	0.590	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV
At2g40750	14.6	99.9	0.363	WRKY54
At3g59030	14.6	99.9	0.437	TT12 (TRANSPARENT TESTA 12)
At5g18870	14.6	99.9	0.353	inosine-uridine preferring nucleoside hydrolase-related

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Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass

GC-MS unknown 23.1 99.7 5/5 1 - - - - 147 103 192 217 361
GC-MS Malonic acid 17.4 99.4 5/5 1 KPC01447 C00383 C3H4O4 104.0109586 147
GC-MS unknown 16.7 99.4 5/5 2 - - - -
GC-MS unknown 16.2 99.4 5/5 2 - - - - 147 281 327
GC-MS unknown 15.4 99.3 5/5 2 - - - -
GC-MS unknown 14.4 99.2 5/5 1 - - - -
GC-MS unknown 12.7 99.0 5/5 1 - - - - 147 103 259 217 129
GC-MS unknown 12.4 99.0 5/5 2 - - - - 130 86 100 144 221
LC-MS unknown 121.9 99.8 1/5 1.0 - - - 619.1483 620.1561
LC-MS unknown 100.4 99.8 2/5 1.6 - - - 638.1251 639.1329
LC-MS unknown 91.6 99.8 4/5 1.0 - - - 670.1377 671.1455
LC-MS unknown 73.8 99.8 1/5 1.5 - - - 654.1543 655.1621
LC-MS unknown 65.4 99.8 4/5 1.6 - - - 508.0741 509.0819
LC-MS unknown 60.0 99.8 5/5 1.4 - - - 624.1209 625.1287
LC-MS unknown 48.6 99.7 1/5 1.5 - - - 540.1359 541.1437
LC-MS unknown 47.2 99.7 1/5 1.2 - - - 597.1799 598.1877
LC-MS unknown 44.7 99.7 5/5 1.2 - - - 764.1480 765.1558
LC-MS unknown 44.4 99.7 2/5 1.1 - - - 577.2107 578.2185
LC-MS unknown 36.2 99.6 1/5 1.3 - - - 428.1548 429.1626
LC-MS unknown 36.1 99.6 1/5 1.3 - - - 643.2378 644.2456
LC-MS unknown 34.1 99.6 1/5 1.0 - - - 892.3209 893.3287
LC-MS unknown 32.9 99.6 1/5 1.3 - - - 424.0628 425.0706
LC-MS unknown 32.9 99.6 1/5 1.3 - - - 819.2838 820.2916
LC-MS unknown 32.0 99.6 1/5 1.1 - - - 894.3319 895.3397
LC-MS unknown 31.2 99.6 2/5 1.0 - - - 624.2131 625.2209
LC-MS unknown 30.1 99.6 2/5 1.2 - - - 607.2255 608.2333
LC-MS unknown 24.7 99.5 1/5 1.1 - - - 595.2080 596.2158
LC-MS unknown 23.3 99.5 1/5 1.5 - - - 138.0319 139.0397
LC-MS unknown 20.3 99.4 2/5 1.7 - - - 338.0621 339.0699
LC-MS unknown 20.3 99.4 1/5 1.3 - - - 572.1782 573.1860
LC-MS unknown 20.2 99.4 2/5 1.0 - - - 446.1408 447.1486
LC-MS unknown 18.7 99.3 2/5 1.4 - - - 471.1664 472.1742
LC-MS unknown 17.8 99.3 3/5 1.3 - - - 1319.9951 1321.0029
LC-MS unknown 17.5 99.3 2/5 1.7 - - - 799.2797 800.2875
LC-MS unknown 16.9 99.3 3/5 1.3 - - - 940.2368 941.2446
LC-MS unknown 16.5 99.2 1/5 2.0 - - - 459.1191 460.1269
LC-MS unknown 16.5 99.2 2/5 1.1 - - - 543.1720 544.1798
LC-MS unknown 16.4 99.2 1/5 1.3 - - - 252.0777 253.0855
LC-MS unknown 16.3 99.2 3/5 1.1 - - - 757.2770 758.2848
LC-MS unknown 16.0 99.2 1/5 1.2 - - - 518.2012 519.2090
LC-MS unknown 15.5 99.2 1/5 1.4 - - - 447.1558 448.1636
LC-MS unknown 13.5 99.1 2/5 1.5 - - - 799.2813 800.2891
LC-MS unknown 13.2 99.0 4/5 1.3 - - - 1320.5038 1321.5116
LC-MS unknown 12.4 99.0 2/5 1.7 - - - 650.2446 651.2524
LC-MS unknown 12.2 99.0 1/5 1.4 - - - 249.0138 250.0216
CE-MS unknown 42.4 99.9 5/5 1.5 - - - 523 522

CE-MS unknown 33.6 99.8 5/5 1.2 - - - 197 196

CE-MS unknown 31.1 99.8 5/5 1.1 - - - 197 196

CE-MS unknown 30.4 99.8 5/5 1.4 - - - 507 506

CE-MS unknown 29.7 99.8 5/5 1.3 - - - 74 73

CE-MS unknown 23.5 99.6 5/5 1.8 - - - 132 131

CE-MS unknown 22.9 99.6 1/5 1.7 - - - 463 462

CE-MS unknown 22.4 99.6 1/5 1.3 - - - 154 153

CE-MS unknown 20.8 99.6 5/5 1.6 - - - 130 129

CE-MS unknown 19.6 99.5 5/5 1.5 - - - 459 458

CE-MS unknown 14.5 99.3 1/5 1.8 - - - 147 148

CE-MS unknown 13.0 99.2 3/5 1.6 - - - 71 72

CE-MS unknown 12.2 99.1 5/5 1.8 - - - 119 118

CE-MS unknown 11.6 99.1 5/5 1.2 - - - 305 306

CE-MS "D-Galacturonic acid, putative" 11.2 99.1 5/5 1.8 KPC00453 C00333 C6H10O7 194.0426527 193

CE-MS unknown 10.6 99.0 5/5 1.1 - - - 85 86

Inst. Type	Regulated metabolite	Std.R.	P.R.	D.F.	D.R.	KaPPA-View	KEGG	Formula	Mass	Measured mass
GC-MS	unknown	23.1	99.7	5/5	1	-	-	-	-	147 103 192 217 361
GC-MS	Malonic acid	17.4	99.4	5/5	1	KPC01447	C00383	C3H4O4	104.0109586	147
GC-MS	unknown	16.7	99.4	5/5	2	-	-	-	-
GC-MS	unknown	16.2	99.4	5/5	2	-	-	-	-	147 281 327
GC-MS	unknown	15.4	99.3	5/5	2	-	-	-	-
GC-MS	unknown	14.4	99.2	5/5	1	-	-	-	-
GC-MS	unknown	12.7	99.0	5/5	1	-	-	-	-	147 103 259 217 129
GC-MS	unknown	12.4	99.0	5/5	2	-	-	-	-	130 86 100 144 221
LC-MS	unknown	121.9	99.8	1/5	1.0	-	-	-	619.1483	620.1561
LC-MS	unknown	100.4	99.8	2/5	1.6	-	-	-	638.1251	639.1329
LC-MS	unknown	91.6	99.8	4/5	1.0	-	-	-	670.1377	671.1455
LC-MS	unknown	73.8	99.8	1/5	1.5	-	-	-	654.1543	655.1621
LC-MS	unknown	65.4	99.8	4/5	1.6	-	-	-	508.0741	509.0819
LC-MS	unknown	60.0	99.8	5/5	1.4	-	-	-	624.1209	625.1287
LC-MS	unknown	48.6	99.7	1/5	1.5	-	-	-	540.1359	541.1437
LC-MS	unknown	47.2	99.7	1/5	1.2	-	-	-	597.1799	598.1877
LC-MS	unknown	44.7	99.7	5/5	1.2	-	-	-	764.1480	765.1558
LC-MS	unknown	44.4	99.7	2/5	1.1	-	-	-	577.2107	578.2185
LC-MS	unknown	36.2	99.6	1/5	1.3	-	-	-	428.1548	429.1626
LC-MS	unknown	36.1	99.6	1/5	1.3	-	-	-	643.2378	644.2456
LC-MS	unknown	34.1	99.6	1/5	1.0	-	-	-	892.3209	893.3287
LC-MS	unknown	32.9	99.6	1/5	1.3	-	-	-	424.0628	425.0706
LC-MS	unknown	32.9	99.6	1/5	1.3	-	-	-	819.2838	820.2916
LC-MS	unknown	32.0	99.6	1/5	1.1	-	-	-	894.3319	895.3397
LC-MS	unknown	31.2	99.6	2/5	1.0	-	-	-	624.2131	625.2209
LC-MS	unknown	30.1	99.6	2/5	1.2	-	-	-	607.2255	608.2333
LC-MS	unknown	24.7	99.5	1/5	1.1	-	-	-	595.2080	596.2158
LC-MS	unknown	23.3	99.5	1/5	1.5	-	-	-	138.0319	139.0397
LC-MS	unknown	20.3	99.4	2/5	1.7	-	-	-	338.0621	339.0699
LC-MS	unknown	20.3	99.4	1/5	1.3	-	-	-	572.1782	573.1860
LC-MS	unknown	20.2	99.4	2/5	1.0	-	-	-	446.1408	447.1486
LC-MS	unknown	18.7	99.3	2/5	1.4	-	-	-	471.1664	472.1742
LC-MS	unknown	17.8	99.3	3/5	1.3	-	-	-	1319.9951	1321.0029
LC-MS	unknown	17.5	99.3	2/5	1.7	-	-	-	799.2797	800.2875
LC-MS	unknown	16.9	99.3	3/5	1.3	-	-	-	940.2368	941.2446
LC-MS	unknown	16.5	99.2	1/5	2.0	-	-	-	459.1191	460.1269
LC-MS	unknown	16.5	99.2	2/5	1.1	-	-	-	543.1720	544.1798
LC-MS	unknown	16.4	99.2	1/5	1.3	-	-	-	252.0777	253.0855
LC-MS	unknown	16.3	99.2	3/5	1.1	-	-	-	757.2770	758.2848
LC-MS	unknown	16.0	99.2	1/5	1.2	-	-	-	518.2012	519.2090
LC-MS	unknown	15.5	99.2	1/5	1.4	-	-	-	447.1558	448.1636
LC-MS	unknown	13.5	99.1	2/5	1.5	-	-	-	799.2813	800.2891
LC-MS	unknown	13.2	99.0	4/5	1.3	-	-	-	1320.5038	1321.5116
LC-MS	unknown	12.4	99.0	2/5	1.7	-	-	-	650.2446	651.2524
LC-MS	unknown	12.2	99.0	1/5	1.4	-	-	-	249.0138	250.0216
CE-MS	unknown	42.4	99.9	5/5	1.5	-	-	-	523	522
CE-MS	unknown	33.6	99.8	5/5	1.2	-	-	-	197	196
CE-MS	unknown	31.1	99.8	5/5	1.1	-	-	-	197	196
CE-MS	unknown	30.4	99.8	5/5	1.4	-	-	-	507	506
CE-MS	unknown	29.7	99.8	5/5	1.3	-	-	-	74	73
CE-MS	unknown	23.5	99.6	5/5	1.8	-	-	-	132	131
CE-MS	unknown	22.9	99.6	1/5	1.7	-	-	-	463	462
CE-MS	unknown	22.4	99.6	1/5	1.3	-	-	-	154	153
CE-MS	unknown	20.8	99.6	5/5	1.6	-	-	-	130	129
CE-MS	unknown	19.6	99.5	5/5	1.5	-	-	-	459	458
CE-MS	unknown	14.5	99.3	1/5	1.8	-	-	-	147	148
CE-MS	unknown	13.0	99.2	3/5	1.6	-	-	-	71	72
CE-MS	unknown	12.2	99.1	5/5	1.8	-	-	-	119	118
CE-MS	unknown	11.6	99.1	5/5	1.2	-	-	-	305	306
CE-MS	"D-Galacturonic acid, putative"	11.2	99.1	5/5	1.8	KPC00453	C00333	C6H10O7	194.0426527	193
CE-MS	unknown	10.6	99.0	5/5	1.1	-	-	-	85	86

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Query	At5g08750
Description	zinc finger (C3HC4-type RING finger) family protein
RAFL ID	pda11021
C.R.	C
R.O.X.L.	10/10 lines
P.O.X.	99.7

Maroon	over-expressed gene
Orange	gene
Yellow	metabolite, lipid mode, GC-MS
Cyan	metabolite, polar mode, GC-MS
Blue	metabolite, LC-MS
Green	metabolite, negative mode, CE-MS
Limegreen	metabolite, positive mode, CE-MS

The prediction of regulatory relationships associated with At5g08750

QueryAt5g08750 Descriptionzinc finger (C3HC4-type RING finger) family protein RAFL IDpda11021 C.R.C R.O.X.L.10/10 lines P.O.X. 99.7

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to extract genes up-regulated and also co-expressed.

Maroonover-expressed gene Orangegene Yellowmetabolite, lipid mode, GC-MS Cyanmetabolite, polar mode, GC-MS Bluemetabolite, LC-MS Greenmetabolite, negative mode, CE-MS Limegreenmetabolite, positive mode, CE-MS

Candidate elements regulated by At5g08750

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Metabolites

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Query At5g08750

Description zinc finger (C3HC4-type RING finger) family protein

RAFL ID pda11021

C.R. C

R.O.X.L. 10/10 lines

P.O.X. 99.7

Maroon over-expressed gene

Orange gene

Yellow metabolite, lipid mode, GC-MS

Cyan metabolite, polar mode, GC-MS

Blue metabolite, LC-MS

Green metabolite, negative mode, CE-MS

Limegreen metabolite, positive mode, CE-MS

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Genes