RnR The prediction of regulatory relationships associated with At5g02840

QueryAt5g02840
DescriptionLCL1 (LHY/CCA1-like 1)
RAFL IDpda01203
C.R.S
R.O.X.L.10/10 lines
P.O.X. 100.0

Jump to MassBase to obtain the original metabolomics dataset of this over-expression experiment.

Click here to show genes regulating the gene of interest.

Click here to show up-regulated genes.

Candidate elements regulated by At5g02840

Genes

Regulated gene Std.R. P.R. Co-X Gene name/alias
At5g02840 41.7 100.0 1.000 LCL1 (LHY/CCA1-like 1)
At1g52140 28.1 100.0 0.611 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At5g23350 15.2 99.9 0.503 GRAM domain-containing protein / ABA-responsive protein-related
At5g15780 14.9 99.9 0.557 pollen Ole e 1 allergen and extensin family protein
At4g00300 14.7 99.9 0.667 fringe-related protein
At5g02460 12.9 99.8 0.609 Dof-type zinc finger domain-containing protein
At5g62100 10.2 99.7 0.715 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)
At3g52540 9.8 99.7 0.583 OFP18 (OVATE FAMILY PROTEIN 18)
At4g27520 8.6 99.6 0.618 plastocyanin-like domain-containing protein
At1g01200 8.5 99.6 0.501 ATRABA3 (ARABIDOPSIS RAB GTPASE HOMOLOG A3)
At3g14310 8.2 99.6 0.603 ATPME3
At5g37660 8.0 99.5 0.625 PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)
At3g28130 7.8 99.5 0.605 nodulin MtN21 family protein
At4g34560 7.8 99.5 0.686 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At2g46590 7.5 99.5 0.553 DAG2 (DOF AFFECTING GERMINATION 2)
At4g04630 7.3 99.4 0.682 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P
At1g23205 7.2 99.4 0.540 invertase/pectin methylesterase inhibitor family protein
At1g35170 7.1 99.4 0.504 -
At5g62940 7.1 99.4 0.646 Dof-type zinc finger domain-containing protein
At2g47930 6.8 99.4 0.737 AGP26 (ARABINOGALACTAN PROTEIN 26)
At2g38640 6.7 99.3 0.605 F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF
At4g00238 6.7 99.3 0.510 DNA-binding storekeeper protein-related
At3g57780 6.6 99.3 0.563 -
At3g61210 6.6 99.3 0.669 embryo-abundant protein-related
At5g19260 6.6 99.3 0.507 F:unknown;P:unknown;C:unknown;MOFPBV
At3g19085 6.3 99.2 0.525 -
At1g04040 6.2 99.2 0.532 acid phosphatase class B family protein
At2g02930 6.2 99.2 0.555 ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)
At5g28290 6.2 99.2 0.590 ATNEK3 (NIMA-RELATED KINASE3)
At2g02950 6.1 99.2 0.663 PKS1 (PHYTOCHROME KINASE SUBSTRATE 1)
At5g14940 6.1 99.2 0.536 proton-dependent oligopeptide transport (POT) family protein
At4g00231 6.0 99.2 0.659 MEE50 (maternal effect embryo arrest 50)
At4g00234 6.0 99.2 0.666 -
At5g62220 6.0 99.2 0.678 exostosin family protein
At2g25090 5.8 99.1 0.535 CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)
At3g47110 5.8 99.1 0.511 leucine-rich repeat transmembrane protein kinase, putative
At3g30250 5.6 99.1 0.508 transposable element gene
At2g02100 5.5 99.0 0.570 LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)
At1g49780 5.4 99.0 0.539 PUB26 (PLANT U-BOX 26)
At4g00170 5.4 99.0 0.703 vesicle-associated membrane family protein / VAMP family protein

Metabolites

Inst. Type Regulated metabolite Std.R. P.R. D.F. D.R. KaPPA-View KEGG Formula Mass Measured mass
GC-MS unknown 57.1 99.9 3/5 1 - - - - 146
GC-MS unknown 24.7 99.7 1/5 2 - - - - 83 97 113
GC-MS unknown 23.8 99.7 5/5 2 - - - - 156
GC-MS L-Tryptophan 20.4 99.6 5/5 2 KPC00738 C00078 C11H12N2O2 204.0898776 202
GC-MS unknown 12.8 99.1 5/5 2 - - - - 117 189 147 133
GC-MS unknown 12.5 99.0 5/5 1 - - - - 85 174 154
LC-MS unknown 44.3 99.7 3/5 1.3 - - - 940.2368 941.2446
LC-MS unknown 39.4 99.7 1/5 1.3 - - - 312.1457 313.1535
LC-MS unknown 33.7 99.6 1/5 1.0 - - - 619.1483 620.1561
LC-MS unknown 29.4 99.5 1/5 1.6 - - - 622.1531 623.1609
LC-MS unknown 20.6 99.4 1/5 1.3 - - - 670.3464 671.3542
LC-MS unknown 17.9 99.3 1/5 1.7 - - - 304.0661 305.0739
LC-MS unknown 13.8 99.1 5/5 1.4 - - - 284.0909 285.0987
LC-MS unknown 13.4 99.1 3/5 1.7 - - - 679.2109 680.2187
LC-MS unknown 13.3 99.0 2/5 1.0 - - - 624.2131 625.2209
LC-MS unknown 12.9 99.0 5/5 1.3 - - - 289.0822 290.0900
LC-MS unknown 12.1 99.0 4/5 1.0 - - - 730.1832 731.1910
CE-MS unknown 48.6 99.9 1/5 2.0 - - - 123 122
CE-MS unknown 45.0 99.9 4/5 1.9 - - - 459 460
CE-MS unknown 13.7 99.3 5/5 1.1 - - - 136 135
CE-MS unknown 10.3 99.0 1/5 1.4 - - - 163 162
CE-MS unknown 9.5 98.9 5/5 1.1 - - - 137 136






Back to the RnR portal site

Back to the KAGIANA project homepage